CONSPECTUS: The understanding of adsorption and reactions of (large) organic molecules at metal surfaces plays an increasingly important role in modern surface science and technology. Such hybrid inorganic/organic systems (HIOS) are relevant for many applications in catalysis, light-emitting diodes, single-molecule junctions, molecular sensors and switches, and photovoltaics. Obviously, the predictive modeling and understanding of the structure and stability of such hybrid systems is an essential prerequisite for tuning their electronic properties and functions. At present, density-functional theory (DFT) is the most promising approach to study the structure, stability, and electronic properties of complex systems, because it can be applied to both molecules and solids comprising thousands of atoms. However, state-of-the-art approximations to DFT do not provide a consistent and reliable description for HIOS, which is largely due to two issues: (i) the self-interaction of the electrons with themselves arising from the Hartree term of the total energy that is not fully compensated in approximate exchange-correlation functionals, and (ii) the lack of long-range part of the ubiquitous van der Waals (vdW) interactions. The self-interaction errors sometimes lead to incorrect description of charge transfer and electronic level alignment in HIOS, although for molecules adsorbed on metals these effects will often cancel out in total energy differences. Regarding vdW interactions, several promising vdW-inclusive DFT-based methods have been recently demonstrated to yield remarkable accuracy for intermolecular interactions in the gas phase. However, the majority of these approaches neglect the nonlocal collective electron response in the vdW energy tail, an effect that is particularly strong in condensed phases and at interfaces between different materials. Here we show that the recently developed DFT+vdW(surf) method that accurately accounts for the collective electronic response effects enables reliable modeling of structure and stability for a broad class of organic molecules adsorbed on metal surfaces. This method was demonstrated to achieve quantitative accuracy for aromatic hydrocarbons (benzene, naphthalene, anthracene, and diindenoperylene), C60, and sulfur/oxygen-containing molecules (thiophene, NTCDA, and PTCDA) on close-packed and stepped metal surfaces, leading to an overall accuracy of 0.1 Å in adsorption heights and 0.1 eV in binding energies with respect to state-of-the-art experiments. An unexpected finding is that vdW interactions contribute more to the binding of strongly bound molecules on transition-metal surfaces than for molecules physisorbed on coinage metals. The accurate inclusion of vdW interactions also significantly improves tilting angles and adsorption heights for all the studied molecules, and can qualitatively change the potential-energy surface for adsorbed molecules with flexible functional groups. Activation barriers for molecular switches and reaction precursors are modified as well.
CONSPECTUS: The understanding of adsorption and reactions of (large) organic molecules at metal surfaces plays an increasingly important role in modern surface science and technology. Such hybrid inorganic/organic systems (HIOS) are relevant for many applications in catalysis, light-emitting diodes, single-molecule junctions, molecular sensors and switches, and photovoltaics. Obviously, the predictive modeling and understanding of the structure and stability of such hybrid systems is an essential prerequisite for tuning their electronic properties and functions. At present, density-functional theory (DFT) is the most promising approach to study the structure, stability, and electronic properties of complex systems, because it can be applied to both molecules and solids comprising thousands of atoms. However, state-of-the-art approximations to DFT do not provide a consistent and reliable description for HIOS, which is largely due to two issues: (i) the self-interaction of the electrons with themselves arising from the Hartree term of the total energy that is not fully compensated in approximate exchange-correlation functionals, and (ii) the lack of long-range part of the ubiquitous van der Waals (vdW) interactions. The self-interaction errors sometimes lead to incorrect description of charge transfer and electronic level alignment in HIOS, although for molecules adsorbed on metals these effects will often cancel out in total energy differences. Regarding vdW interactions, several promising vdW-inclusive DFT-based methods have been recently demonstrated to yield remarkable accuracy for intermolecular interactions in the gas phase. However, the majority of these approaches neglect the nonlocal collective electron response in the vdW energy tail, an effect that is particularly strong in condensed phases and at interfaces between different materials. Here we show that the recently developed DFT+vdW(surf) method that accurately accounts for the collective electronic response effects enables reliable modeling of structure and stability for a broad class of organic molecules adsorbed on metal surfaces. This method was demonstrated to achieve quantitative accuracy for aromatic hydrocarbons (benzene, naphthalene, anthracene, and diindenoperylene), C60, and sulfur/oxygen-containing molecules (thiophene, NTCDA, and PTCDA) on close-packed and stepped metal surfaces, leading to an overall accuracy of 0.1 Å in adsorption heights and 0.1 eV in binding energies with respect to state-of-the-art experiments. An unexpected finding is that vdW interactions contribute more to the binding of strongly bound molecules on transition-metal surfaces than for molecules physisorbed on coinage metals. The accurate inclusion of vdW interactions also significantly improves tilting angles and adsorption heights for all the studied molecules, and can qualitatively change the potential-energy surface for adsorbed molecules with flexible functional groups. Activation barriers for molecular switches and reaction precursors are modified as well.
Adsorption of organic molecules at metal
surfaces is attracting
increasing research attention, owing to their potential importance
in many applications, for instance, catalysis, molecular switches
and sensors, photovoltaics, and energy materials.[1−5] Such interfaces synergetically combine the best features
of two distinct material classes, for example, the electrical conductivity
of the metal and the highly tunable properties of organic molecules,
resulting in new functionalities that are not possessed by either
of the materials separately.[6] The electronic,
optical, and transport properties of such hybrid systems are very
sensitive to the adsorbate structure and intermolecular interactions.[7,8] Therefore, the accurate description of the bonding between adsorbates
and substrates is key to understanding and controlling the functionality
of such hybrid systems, and a prerequisite for designing novel nanodevices
at the single-molecule level. This is a challenge for theory because
the bonding in complex organic/metal systems arises from a delicate
balance between covalent bonds, van der Waals (vdW) forces, hydrogen
bonds, charge transfer, and Pauli repulsion.[8] Indeed, until recent developments for efficiently incorporating
the long-range vdW energy within state-of-the-art density-functional
theory (DFT), it was not possible to determine the structure and stability
for extended systems and adsorption processes.Nowadays, a variety
of electronic structure methods exist that
in principle could be applied to inorganic/organic systems. It would
be desirable to use quantum-chemical techniques, such as the full
configuration interaction or coupled-cluster methods, which are potentially
highly accurate.[9,10] Unfortunately, these wave function-based
calculations are computationally too expensive and presently not feasible
for studying large systems. In the DFT framework, generalized gradient
approximated (GGA) functionals can often properly treat Pauli repulsion,
covalent, ionic, and strong hydrogen bonds.[11] However, these widely used functionals fail to capture the long-range
vdW interactions and suffer from severe self-interaction (SI) errors.[12] Hybrid functionals, such as PBE0 and HSE, significantly
reduce the SI error, but are still unable to properly account for
vdW interactions.[13] Because of this, the
development of accurate and efficient vdW-inclusive DFT approaches
has become an active field of research in the past decade. Examples
of recently developed methods include DFT-D3,[14] vdW-DF2,[15] and vdW-DF-type functionals
with modified exchange,[16] BEEF-vdW functionals,[17] the XDM method,[18,19] and the DFT+vdW
method.[8,20] We refer the reader to refs (8 and 21−23) for recent
reviews of these methods and their applications.While the role
of vdW interactions for the description of intermolecular
and intramolecular bonding in the gas phase has been reasonably well
understood, much less is known about vdW interactions in solids and
adsorption. This stems from the fact that so far there is no established
benchmark data set for molecular adsorption on solid surfaces, neither
from high-level theoreticalcalculations nor from reliable measurements.
Moreover, nonlocal collective electron response (or screening) effects,
which are particularly important for extended systems, are not properly
accounted for in most of widely used approaches. Recently, we developed
a method, termed “DFT+vdWsurf”,[24] to explicitly include these collective effects
of an extended substrate. This method achieves quantitative results
for 25 adsorption systems (from a set of 9 molecules on 8 metals),
leading to an overall accuracy of 0.1 Å in adsorption heights
and 0.1 eV in binding energies with respect to state-of-the-art experiments.[25]In this Account, we address the state-of-the-art
of modeling of
organic molecules adsorbed at metal surfaces. For such systems, the
SI errors of semilocal DFT functionals often cancel out when computing
adsorption energies. Therefore, the SI errors, which are known to
lead to spurious charge-transfer problems for ionic crystals and oxides,
can be safely ignored throughout this work.[26] We demonstrate that the correct inclusion of vdW interactions including
collective substrate response in the DFT framework allows us to quantitatively predict adsorption geometries and energetics
for certain systems. Moreover, vdW interactions can qualitatively affect adsorption processes in many applications, for example, change
the potential-energy surfaces and reaction pathways of molecular switches
and model catalysts. Despite the fact that successful prediction of
structural and energetic properties of single molecules on metal surfaces
now seems possible, many serious challenges remain in the study of
complex organic/metal interfaces. We will summarize these challenges
to motivate further developments toward reliable methods that can
efficiently capture the full complexity of many-body exchange-correlation
effects in HIOS.
Comparison between Theory and Experiment
Accurate experimental data are crucial as a benchmark for theoretical
description of organic/metal systems. A number of experimental techniques
provide reliable information concerning adsorption geometries and
energetics for molecules at surfaces, ranging from normal incidence
X-ray standing wave (NIXSW),[1,27] low-energy electron
diffraction (LEED), microcalorimetry measurements,[28−31] and temperature-programmed desorption
(TPD). Note that most of these methods probe the statistics of adsorbed
molecular ensembles, which makes it sometimes difficult to directly
compare with DFT calculations that are carried out for single adsorbed
molecules or well-ordered monolayers. Thus, one should always ensure
that the coverage and structure used in DFT calculations represents
the experimental situation as closely as possible. Moreover, special
attention must be paid in the interpretation of experimental adsorbate
geometry, binding energy, and electronic properties. For example,
adsorbed molecules, such as benzene, may decompose during heating
in TPD measurements, in particular at low coverage.[32] Adsorption of molecules on steps, kinks, and defects might
also complicate the interpretation of experimental measurements. In
addition, the recent thermodynamic analysis of Campbell and Sellers[33] demonstrates that the pre-exponential factor
used in the Redhead analysis of TPD experiments on organic molecules
should be noticeably larger than the typically employed value of 1013 s–1.Addressing the challenge of
consistent comparison between experiment
and theory, novel experimental approaches have been recently developed
for direct identification of HIOS at single-molecule level. For example,
by repeatedly detaching a molecule from a metal surface, Tautz’s
group introduced a novel experimental method to extract the binding
potential of large organic adsorbates on surfaces.[34] Another promising example was reported by Schuler et al.,[35] by analyzing frequency-shift curves from noncontact
atomic force microscopy (NC-AFM), the adsorption height differences
and tilts of the molecular plane can now be discriminated with a precision
of 3 pm and 0.2°, respectively. These efforts facilitate the
important reconciliation of experiments and theory at the single-molecule
level.
van der Waals Interactions Inclusive DFT Methods
Many
encouraging ideas and methods have been proposed in recent
years for approximately including the missing long-range vdW interactions
in DFT (see refs (8 and 21−23) and references therein). Loosely speaking, different available methods
can be divided into two classes: (a) interatomic methods, where electronic
interactions are coarse-grained into atomic fragments; and (b) nonlocal
functionals that model vdW interactions as integrals over r and r′ with a given approximate interaction
kernel K(r,r′).
Despite significant progress in this field during the past decade,
many questions still remain unanswered and further development is
required before a truly universally applicable (accurate and efficient)
method emerges. For example, interatomic vdW potentials are frequently
employed for the modeling of molecules on surfaces,[36−38] neglecting
the relatively strong long-range Coulomb screening present within
inorganic bulk materials. On the other hand, the popular nonlocal
vdW-DF functionals[15,39] use a homogeneous dielectric
approximation for the polarizability, which is not expected to be
accurate for inhomogeneous systems, such as molecules or surfaces.
Nevertheless, the interaction energies between small organic molecules
turn out to be reasonably accurate. Understanding the physical reasons
of why these different approaches “work well” outside
of their expected domain of applicability is important for developing
more robust approximations.
The DFT+vdWsurf Method
It is obvious that accurate
and efficient treatment of electronic
exchange and correlation effects in HIOS demands effective and novel
solutions. We recently developed the DFT+vdWsurf method,[24] which extends pairwise vdW approaches to modeling
of adsorbates on surfaces by a synergetic combination of the DFT+vdW
method[20] for intermolecular interactions
with the Lifshitz–Zaremba–Kohn (LZK) theory.[40,41] This method has been implemented in a variety of codes; in particular,
all calculations reported here have been carried out using the all-electron
atom-centered basis set code FHI-aims.[42] Here we only highlight several salient features of our method, summarized
in refs (24 and 43):(1) The
collective response (screening) by the
substrate electrons is included in DFT+vdWsurf via the
LZK theory, through the dependence of the vdW parameters on the dielectric
function of the substrate. Typically, we use the experimental dielectric
function.(2) The spatial variations, or the “semi-local”
interface
polarization, and image-plane effects in the dielectric function close
to the surface are approximately accounted for by the original DFT+vdW
method, by its dependence on the self-consistent electron density
of the interface.(3) The DFT+vdWsurf method can
be coupled to different
DFT exchange-correlation functionals, including advanced schemes such
as the range-separated hybrid functionals.[44] This enables accurate description of both electronic properties
and binding structures on equal footing. For the sake of consistency,
here we couple the vdWsurf method to the PBE functional,[45] which can be universally applied to both molecules
and solids. In particular, the PBE functional is better suited for
metals than hybrid functionals.Screened van der Waals parameters as used
in the PBE+vdWsurf method. For comparison, the corresponding
bare (unscreened) parameters
as used in the PBE+vdW method are also shown.The inclusion of collective response effects in the vdWsurf method significantly changes the vdW C6 coefficients and vdW radii of transition metals in comparison
to
bare (unscreened) values used in many alternative interatomic vdW
methods. As shown in Figure 1, the collective
response is extremely sensitive to the dielectric properties of the
metal substrate, reducing the C6 coefficients
by merely 30% for Pd to 450% for Rh. The change in the C6 coefficients from their gas-phase values essentially
reflects the effective number of delocalized electrons in different
metals, since these electrons act to screen the vdW interaction. At
the same time, vdW radii are also reduced for all metals. This leads
to opposite effects in the vdW energy and results in a nontrivial
behavior for different metals. As illustrated in our previous work,[43] the combined effect of dielectric screening
decreases the binding energies when benzene adsorbs on Cu(111), Ag(111),
Au(111), and Rh(111) surfaces, whereas an increase in the adsorption
energies is observed for benzene on Pd(111), Pt(111), and Ir(111)
surfaces. In addition, the collective response effects shorten the
adsorption height by 0.2 Å for benzene on coinage metal surfaces,
but do not change adsorption geometries for benzene chemisorbed on
the Pd(111), Pt(111), Rh(111), and Ir(111) surfaces. This is rationalized
by the fact that covalent bonds largely determine the local coordination
for benzene at these substrates.
Figure 1
Screened van der Waals parameters as used
in the PBE+vdWsurf method. For comparison, the corresponding
bare (unscreened) parameters
as used in the PBE+vdW method are also shown.
Vertical Adsorption Distances
and Stability of Organic Molecules
on Metal Surfaces
Let us start with the conceptually most
simple physisorbed systems,
exhibiting only weak overlap of electron orbitals between the adsorbate
and the substrate surface. Prototypical examples of physisorption
include noble gases adsorbed on metal surfaces,[49] benzene on coinage metal surfaces,[43] and graphene on the (111) surfaces of Al, Ag, Cu, Au, and Pt.[50] Physisorbed systems are typically characterized
by relatively weak binding energy, relatively large adsorption height,
almost zero molecular distortion, and flat potential-energy surface
(PES) for sliding of the adsorbed species parallel to the surface.
In these cases, the vdW interactions are frequently the only force
that binds the molecule to the surface. As shown in Figure 2a, the inclusion of vdW forces by the vdWsurf method on top of the PBE functional brings the benzene molecule
closer to the Au(111) surface by 0.6 Å, and leads to an excellent
agreement with the measured vertical position (2.95–3.10 Å),
obtained from the experimental work function of benzene/Au(111), and
the adsorption height of pentacene/Au(111).[51−53] In contrast,
the adsorption height from the standard PBE functional (3.62 Å)
is considerably larger than that obtained by NIXSW.[54] Figure 2a also shows the binding
energy as a function of adsorption height d, from
which one can observe that the PBE+vdWsurf binding energy
is on top of the experimental values at 0.1 ML, determined by the
most recent and thorough interpretation of TPD data by Campbell’s
group (0.74 vs 0.76 eV).[43]
Figure 2
Top: Adsorption structures
of the benzene/Au(111) and benzene/Pt(111)
systems, both at the so-called bri30° adsorption site, where
30° refers to the angle of the C–C bond relative to the
close-packed metal rows. The indicated distances are obtained based
on the PBE+vdWsurf optimized structures. Gray, yellow,
cyan, and white spheres represent Pt, Au, C, and H atoms, respectively.
Bottom: Adsorption energy −Ead as
a function of the adsorption height d for benzene
on the Au(111) and Pt(111) surfaces from the PBE and PBE+vdWsurf methods (all carbon atoms are located at a distance d from the top metal layer). The experimentally derived binding distances
and adsorption energies are indicated by yellow intervals (from refs (28, 43, 46, and 47)). Reproduced with permission from ref (48). Copyright 2012 American
Physical Society.
Top: Adsorption structures
of the benzene/Au(111) and benzene/Pt(111)
systems, both at the so-called bri30° adsorption site, where
30° refers to the angle of the C–C bond relative to the
close-packed metal rows. The indicated distances are obtained based
on the PBE+vdWsurf optimized structures. Gray, yellow,
cyan, and white spheres represent Pt, Au, C, and H atoms, respectively.
Bottom: Adsorption energy −Ead as
a function of the adsorption height d for benzene
on the Au(111) and Pt(111) surfaces from the PBE and PBE+vdWsurf methods (all carbon atoms are located at a distance d from the top metal layer). The experimentally derived binding distances
and adsorption energies are indicated by yellow intervals (from refs (28, 43, 46, and 47)). Reproduced with permission from ref (48). Copyright 2012 American
Physical Society.When comparing the relative
vertical positions for benzene adsorbed
on Cu, Ag, and Au in Figure 3, only the accurate
inclusion of vdW interactions reproduces the experimental trend, known
from NIXSW measurements, dCM(Cu) < dCM(Ag) < dCM(Au).[54] This hierarchy stems from a combined effect
of screened C6 coefficients and vdW radii
in the vdW energy, both of which increase from Cu to Ag to Au (see
Figure 1). In contrast, the bare (unscreened)
values of vdW parameters do not follow this trend.
Figure 3
Adsorption energies Ead (in
eV) and
the average distance between carbon and the first metal layer dCM (in Å) for benzene on the (111) surfaces
of Cu, Ag, Au, Pd, Pt, Rh, and Ir from PBE and PBE+vdWsurf methods.
Besides the
PBE+vdWsurf method, a number of recently
developed vdW-inclusive methods, such as the DFT-D,[55] vdW-DF,[39] and M06-L,[56] also give results in reasonable agreement with
experiments for these weakly bound systems. The general consensus
between all these approaches is that the inclusion of the vdW energy
significantly reduces the adsorption height and increases the binding
energy.
Strongly Bound Organic/Metal Systems
By now, it is
well established that vdW interactions contribute
significantly to the binding in physisorbed systems. However, what
is the role of vdW interactions for covalently bound molecules on
metal surfaces? When molecular wave functions strongly overlap with
substrate electronic bands, vdW forces are deemed to play a minor
role. Because of this, standard GGA functionals are often considered
to yield reasonable results for chemisorption. Nevertheless, as shown
by Campbell’s group,[28,30] the GGA-PW91 binding
energy only accounts for half of the heat of adsorption directly measured
in microcalorimetry experiments. Moreover, the binding energy difference
between experiments and GGA calculations increased with molecular
size (e.g., from benzene to naphthalene).[30] We rationalized this disagreement between theory and experiment
by adding and analyzing the role of vdW interactions.[48] Other studies also clearly identified that the inclusion
of vdW interactions is crucial for the correct description of covalently
bound molecules on metal surfaces.[57−59] Taking the benzene/Pt(111)
system as an example (see Figure 2b), the relatively
short adsorption height (2.08 Å), the bending of the molecule,
the elongation of the C–C bonds, and the tilting of the H atoms
all unambiguously suggest that the nature of bonding is strong chemisorption.
However, also in this case, the PBE+vdWsurf method significantly
increases the binding energy by 1.15 eV compared to standard PBE functional,
and leads to agreement with the measured microcalorimetry values at
0.7 ML (1.96 vs 1.57–1.91 eV, the same coverage used in the
DFT calculations). Almost the same adsorption height is found by PBE
(2.10 Å) and PBE+vdWsurf (2.08 Å) methods, in
agreement with LEED experiments (2.02 ± 0.02 Å).[47] This suggests that chemical bonds largely determine
the adsorption height for strongly bound benzene. This can be understood
by comparing the steepness of the repulsive wall in Figure 2 for benzene on Au and Pt. The Pauli repulsion is
much stronger for the Pt substrate, and the attractive vdW interaction
only reduces the adsorption height of benzene by 0.02 Å compared
to the PBE functional.Adsorption energies Ead (in
eV) and
the average distance between carbon and the first metal layer dCM (in Å) for benzene on the (111) surfaces
of Cu, Ag, Au, Pd, Pt, Rh, and Ir from PBE and PBE+vdWsurf methods.Comparison of the binding-energy
curves in Figure 2 shows that the vdW energy
for benzene on Pt(111) is considerably
larger than that for Au(111) at respective equilibrium distances (1.15
vs 0.68 eV). At first glance, this finding is unexpected, in particular
when considering that the vdW C6 coefficients
and vdW radii are almost identical for Pt and Au (see Figure 1). The explanation simply stems from the rather
short adsorption height of the benzene molecule on the Pt(111) surface.[43] The above conclusion, that is, the greater role
of the vdW energy in strongly bound systems, holds in general for
benzene on many transition-metal surfaces. As shown in Figure 3, according to the binding energy and adsorption
height, the seven benzene adsorption systems can be classified as
either weak adsorption, including benzene on Cu(111), Ag(111), and
Au(111), or strong adsorption, including benzene on Pd(111), Pt(111),
Rh(111), and Ir(111). In all cases, the vdW energies for the latter
group (∼1 eV) are considerably larger than those for the former
(∼0.6 eV). Similar conclusion also holds for water adsorption
on metals. For example, by using the optB88-vdW functional,[16] Carrasco et al.[60] found that the vdW contribution for water/Pt(111) is larger than
that for water/Au(111) [186 vs 158 meV/H2O], since the
water molecule adsorbs closer to the Pt surface than to the Au surface.
We thus conclude that the stability for benzene (and other molecules)
on reactive transition metals results from a concerted effort of covalent
bonding and vdW interactions.Although many vdW-inclusive methods
work well for physisorption,
they fail or perform poorly when used to study strongly bound systems.
For example, the computed binding energies for benzene/Pt(111) using
the vdW-DF functional[39] and its second
(improved) version (0.77 and 0.34 eV, respectively)[15] are much smaller than the experimental values (1.57–1.91
eV), and even smaller than those calculated with the PBE functional
(0.81 eV). We also note that the results are extremely sensitive to
the choice of the exchange part in the vdW-DF-type functionals, yielding
a wide range of binding energies for benzene/Pt(111) at the same coverage
(0.6–2.4 eV).[59] Thus, achieving
the right balance between exchange and correlation is not a trivial
task. Furthermore, most of the mentioned methods do not correctly
account for the strong screening by the extended substrate, making
their transferability questionable.
Molecular Tilting Angles
and Potential-Energy Surfaces
Most organic/metal systems
of importance in realistic applications
exhibit nontrivial interplay of weak and strong bonding scenarios.
Some representative examples include pyridine, pyrazine, thiophene,
and phenol molecules adsorbed on metal surfaces.[36] In these cases, covalent bonds are formed between oxygen,
sulfur, or nitrogen of the molecule and metal atoms of the substrate,
while vdW forces dominate the interactions of the remaining “parts”
of the molecule (such as the π-conjugated carbon rings and methyl
groups). Obviously, when adsorbate geometries are not parallel the
surface, computational methods that can simultaneously treat covalent
bonding and vdW interactions are required.The recently synthesized
olympicene-derived ketone (C19H10O) adsorbed
on the Cu(111) surface is a good model
for complex organic/metal systems (Figure 4; top). This molecule contains five carbon rings and a carbonyl group
with a sp2-hybridized central carbon, allowing us to study
the interplay of covalent bonds and vdW interactions in a single adsorption
system. In experiments, the tilt of the ketone can be observed by
the AFM image contrast: The darker (lighter) areas suggest stronger
(weaker) contact with the substrate.[35] Both
the PBE and PBE+vdWsurf calculations show that the ketone
is in an intermediate regime between physisorption and chemisorption:
The end group of the molecule (C–O) anchors to the Cu(111)
surface, forming a covalent bond between O and Cu, while the distances
between carbon rings and the metal substrate are much larger. However,
the tilting angle of the PBE-relaxed structure (16.6°) is significantly
larger than that obtained from AFM experiments. The latter was quantitatively
determined by a least-squares fitting to the spectra of three-dimensional
force maps and gives 5.4° for a CO-terminated tip and 4.9 ±
0.1° for a Xe-terminated tip.[35] Correspondingly,
PBE dramatically overestimates the distance between the central carbon
atom and the first metal layer by 1.4 Å. The vdW interactions
bring the carbon rings closer to the Cu(111) surface compared to PBE,
noticeably reducing the adsorption height to 2.66 Å. The calculated
tilt angle of 5.9° is in excellent agreement with the AFM derived
result.[35]
Figure 4
Least mean square fit plane to the carbon
atoms in the PBE and
PBE+vdWsurf optimized adsorption structures for the olympicene
ketone (top), olympicene radical (middle), and olympicene molecule
(bottom) on the Cu(111) surface. Note that the effective adsorption
height z* measured by AFM is translated into the
absolute adsorption height z by adding a tip and
bias dependent offset, which is 0.4 ± 0.05 Å for Xe-terminated
tip.[35]
Least mean square fit plane to the carbon
atoms in the PBE and
PBE+vdWsurf optimized adsorption structures for the olympiceneketone (top), olympicene radical (middle), and olympicene molecule
(bottom) on the Cu(111) surface. Note that the effective adsorption
height z* measured by AFM is translated into the
absolute adsorption height z by adding a tip and
bias dependent offset, which is 0.4 ± 0.05 Å for Xe-terminated
tip.[35]The good agreement between PBE+vdWsurf and experiments
for tilting angles and adsorption heights is also found for the olympicene
radical (Figure 4; middle) and the olympicene
molecule (Figure 4; bottom) on Cu(111). Different
from the olympicene ketone, the computed tilting angles for the olympicene
and its radical are almost the same no matter whether the PBE or PBE+vdWsurf is used. Nevertheless, the radical and the olympicene
are 0.8 and 1.2 Å closer to the substrate surface upon inclusion
of vdW interactions in the calculations.
Role of vdW Interactions
in the Adsorption of Molecules with Flexible Functional Groups
In many catalytic applications, as well as in molecular switches
and molecular sensors, rather flexible molecules are employed as adsorbates.
However, as shown by Nørskov and Bligaard,[61] the standard electronic structure methods are frequently
not sufficiently accurate with their structure prediction, thus hindering
a reliable description of catalytic mechanisms. During the last decades,
DFT has been extensively applied to study molecular reactions on surfaces
(see refs (62−64) for detailed reviews).
In these earlier studies, DFT has been extensively used to understand
the adsorption of small molecules, such as CO, NO, and N2, and their reactions over various catalysts. Semilocal DFT functionals
frequently yield good agreement with experimental findings, but this
is not always the case (as exemplified in the famous “CO adsorption
puzzle”[65]), which stems from severe
SI errors in semilocal DFT functionals.In the case of larger
molecules adsorbed on surfaces, SI errors
are typically less of an issue in relative terms, and the lack of
vdW interactions is the main source of error when semilocal DFT functionals
are employed. A prototypical example is the adsorption of ethanol
(C2H5OH) at the Pt(111), an essential process
in the steam reforming reaction to convert ethanol into H2. The standard PBE functional yields the same stability for the two
structures shown in Figure 5a (0.28 eV). The
vdW interactions profoundly influence the PES, contributing differently
to the binding energy for the two configurations (0.45 eV for the
parallel, and 0.38 eV for the perpendicular one). Therefore, the PBE+vdWsurf method predicts that the parallel orientation of the C–C
bond is 70 meV more stable than the perpendicular one (0.73 vs 0.66
eV). Upon inclusion of vdW forces, the carbon atoms are found closer
to the substrate, facilitating the breakage of the C–C bond
in ethanol.[66]
Figure 5
Two most stable structures
of ethanol (C2H5OH) at Pt(111) (a) and of isophorone
at the Pd(111) (b) relaxed by
the PBE and PBE+vdWsurf methods. Gray, white, red, light
gray, and yellow represent C, H, O, Pt, and Pd atoms, respectively.
Reproduced with permission from ref (67). Copyright 2012 American Chemical Society.
Two most stable structures
of ethanol (C2H5OH) at Pt(111) (a) and of isophorone
at the Pd(111) (b) relaxed by
the PBE and PBE+vdWsurf methods. Gray, white, red, light
gray, and yellow represent C, H, O, Pt, and Pd atoms, respectively.
Reproduced with permission from ref (67). Copyright 2012 American Chemical Society.A similar example has been reported
by some of us on the low-temperature
dehydrogenation of the isophorone molecule at the Pd(111) surface.[67] Isophorone is an important proxy for catalysis
because it contains conjugated C=C and C=O bonds that
can be selectively hydrogenated. Isophorone is also a prochiral molecule
that can be transformed to two enantiomers after selective hydrogenation
of the olefinic double bond. For the isophorone/Pd(111) system, the
experiments show that the C=C and C=O vibrational intensities
do not appear in the IR spectra. This suggests parallel orientation
of the two bonds relative to the metal surface due to the metal selection
rule. However, without the inclusion of vdW forces one cannot easily
identify the adsorption geometries consistent with experimental observations:
the structure relaxed using the standard PBE functional shows that
the C=O and C=C bonds are tilted (see Figure 5b). Only after correctly accounting for vdW interactions,
the C=C and C=O bonds become parallel to the substrate,
in agreement with the experimental IR spectra. Furthermore, the proximity
of the hydrogen atoms to the metal reduces the dehydrogenation barriers
for this system, a process that is also observed in TPD experiments.[67]In summary, the above two examples show
that, for larger molecules
on metal surfaces, the vdW forces can significantly affect the orientation
of functional groups and the energy hierarchy of adsorbed molecules.
Thus, we expect noticeably different activation barriers and reaction
pathways in catalytic applications.
Potential-Energy Surfaces
of Molecular Switches
Another example of a qualitative change
in the PES of molecules
adsorbed on surfaces is found for molecular switches based on benzene
derivatives. As shown in Figure 2b, an energy
barrier exists at 2.6 Å in the PBE adsorption curve for benzene/Pt(111),
corresponding to a sudden change in the occupation of frontier molecular
orbitals.[48] Upon inclusion of vdW interactions,
the barrier to adsorption almost vanishes, and a metastable precursor
state emerges just above 3 Å, a typical distance for physisorption.
This physisorbed precursor state has also been observed by Ihm et
al.[28] in their sticking-coefficient measurements
for benzene on Pt(111). Aiming at controlling the interplay between
physisorption and chemisorption minima, we also studied the adsorption
of benzene derivatives on metals. In the case of halogenated benzene
derivatives, we demonstrated that the physisorbed state can have essentially
equal stability as the chemisorbed state, with a moderate switching
barrier between them.[68] In contrast, without
vdW interactions, the physisorbed state is completely absent in the
binding curve.
Challenges and Outlook for the Accurate Description
of Inorganic/Organic
Systems
While this paper discussed the modeling of organic
molecules adsorbed
at metal surfaces, our conclusions apply to a much broader class of
systems. For example, the accurate treatment of collective response
by the substrate electrons is crucial for any polarizable solid, including
semiconductors, ionic solids, oxides, and molecular materials. The
DFT+vdWsurf method is in principle equally applicable to
all these classes of materials. However, several challenges remain
to be addressed for a seamless treatment of monolayer/multilayer formation
on solids. First and foremost, the full treatment of collective response
in the combined adsorbate/substrate system needs to be accounted for,
including the screening of intermolecular interactions within the
adsorbed layers. This can be achieved by seamless many-body methods,
such as the random-phase approximation (RPA)[69] to the correlation energy or the recently developed efficient dipole
approximation to the RPA, termed DFT+MBD.[70,71] While RPA can be used to study all classes of materials, the MBD
method currently can only be applied to nonmetallic systems. Second,
the SI error in the underlying semilocal DFT functional can affect
charge transfer and electronic level alignment between the adsorbate
and the substrate. This issue has not been fully solved yet, since
the reduction of SI error requires the addition of a fraction of exact
exchange which needs to be screened in inhomogeneous systems. The
screening properties of molecules and solids are rather different,
leading to distinct parameter ranges that need to be seamlessly coupled.In summary, we have demonstrated that the inclusion of screened
vdW interactions in DFT calculations leads to significant improvement
in vertical adsorption heights, tilting angles, stabilities, and potential-energy
surfaces of both weakly and strongly adsorbed molecules on metal surfaces.
However, we stress that our understanding of the structure, stability,
and electronic properties of complex adsorption systems is still in
early stages of development and further major breakthroughs can be
anticipated in the near future.
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