Literature DB >> 24895855

Photocontrollable fluorescent proteins for superresolution imaging.

Daria M Shcherbakova1, Prabuddha Sengupta, Jennifer Lippincott-Schwartz, Vladislav V Verkhusha.   

Abstract

Superresolution fluorescence microscopy permits the study of biological processes at scales small enough to visualize fine subcellular structures that are unresolvable by traditional diffraction-limited light microscopy. Many superresolution techniques, including those applicable to live cell imaging, utilize genetically encoded photocontrollable fluorescent proteins. The fluorescence of these proteins can be controlled by light of specific wavelengths. In this review, we discuss the biochemical and photophysical properties of photocontrollable fluorescent proteins that are relevant to their use in superresolution microscopy. We then describe the recently developed photoactivatable, photoswitchable, and reversibly photoswitchable fluorescent proteins, and we detail their particular usefulness in single-molecule localization-based and nonlinear ensemble-based superresolution techniques. Finally, we discuss recent applications of photocontrollable proteins in superresolution imaging, as well as how these applications help to clarify properties of intracellular structures and processes that are relevant to cell and developmental biology, neuroscience, cancer biology and biomedicine.

Entities:  

Keywords:  EosFP; PAGFP; PALM; PAmCherry; RESOLFT

Mesh:

Substances:

Year:  2014        PMID: 24895855      PMCID: PMC4254894          DOI: 10.1146/annurev-biophys-051013-022836

Source DB:  PubMed          Journal:  Annu Rev Biophys        ISSN: 1936-122X            Impact factor:   12.981


  87 in total

1.  High-density mapping of single-molecule trajectories with photoactivated localization microscopy.

Authors:  Suliana Manley; Jennifer M Gillette; George H Patterson; Hari Shroff; Harald F Hess; Eric Betzig; Jennifer Lippincott-Schwartz
Journal:  Nat Methods       Date:  2008-01-13       Impact factor: 28.547

2.  Interferometric fluorescent super-resolution microscopy resolves 3D cellular ultrastructure.

Authors:  Gleb Shtengel; James A Galbraith; Catherine G Galbraith; Jennifer Lippincott-Schwartz; Jennifer M Gillette; Suliana Manley; Rachid Sougrat; Clare M Waterman; Pakorn Kanchanawong; Michael W Davidson; Richard D Fetter; Harald F Hess
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-06       Impact factor: 11.205

3.  Generation of monomeric reversibly switchable red fluorescent proteins for far-field fluorescence nanoscopy.

Authors:  Andre C Stiel; Martin Andresen; Hannes Bock; Michael Hilbert; Jessica Schilde; Andreas Schönle; Christian Eggeling; Alexander Egner; Stefan W Hell; Stefan Jakobs
Journal:  Biophys J       Date:  2008-07-25       Impact factor: 4.033

Review 4.  Advances in single-molecule fluorescence methods for molecular biology.

Authors:  Chirlmin Joo; Hamza Balci; Yuji Ishitsuka; Chittanon Buranachai; Taekjip Ha
Journal:  Annu Rev Biochem       Date:  2008       Impact factor: 23.643

5.  Quantitative analysis of photoactivated localization microscopy (PALM) datasets using pair-correlation analysis.

Authors:  Prabuddha Sengupta; Jennifer Lippincott-Schwartz
Journal:  Bioessays       Date:  2012-03-23       Impact factor: 4.345

6.  A FRET-facilitated photoswitching using an orange fluorescent protein with the fast photoconversion kinetics.

Authors:  Oksana M Subach; David Entenberg; John S Condeelis; Vladislav V Verkhusha
Journal:  J Am Chem Soc       Date:  2012-08-27       Impact factor: 15.419

7.  Photoactivatable mCherry for high-resolution two-color fluorescence microscopy.

Authors:  Fedor V Subach; George H Patterson; Suliana Manley; Jennifer M Gillette; Jennifer Lippincott-Schwartz; Vladislav V Verkhusha
Journal:  Nat Methods       Date:  2009-01-25       Impact factor: 28.547

8.  Nanoscopy with more than 100,000 'doughnuts'.

Authors:  Andriy Chmyrov; Jan Keller; Tim Grotjohann; Michael Ratz; Elisa d'Este; Stefan Jakobs; Christian Eggeling; Stefan W Hell
Journal:  Nat Methods       Date:  2013-07-07       Impact factor: 28.547

9.  Simultaneous multiple-emitter fitting for single molecule super-resolution imaging.

Authors:  Fang Huang; Samantha L Schwartz; Jason M Byars; Keith A Lidke
Journal:  Biomed Opt Express       Date:  2011-04-29       Impact factor: 3.732

10.  A photoswitchable orange-to-far-red fluorescent protein, PSmOrange.

Authors:  Oksana M Subach; George H Patterson; Li-Min Ting; Yarong Wang; John S Condeelis; Vladislav V Verkhusha
Journal:  Nat Methods       Date:  2011-07-31       Impact factor: 28.547

View more
  49 in total

Review 1.  Viral and transgenic reporters and genetic analysis of adult neurogenesis.

Authors:  Grigori Enikolopov; Linda Overstreet-Wadiche; Shaoyu Ge
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-08-03       Impact factor: 10.005

Review 2.  Applying superresolution localization-based microscopy to neurons.

Authors:  Haining Zhong
Journal:  Synapse       Date:  2015-02-28       Impact factor: 2.562

3.  pH-dependent transient conformational states control optical properties in cyan fluorescent protein.

Authors:  Elena N Laricheva; Garrett B Goh; Alex Dickson; Charles L Brooks
Journal:  J Am Chem Soc       Date:  2015-02-18       Impact factor: 15.419

4.  Profile of Eric Betzig, Stefan Hell, and W. E. Moerner, 2014 Nobel Laureates in Chemistry.

Authors:  Jennifer Lippincott-Schwartz
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-17       Impact factor: 11.205

5.  Development of bimolecular fluorescence complementation using rsEGFP2 for detection and super-resolution imaging of protein-protein interactions in live cells.

Authors:  Sheng Wang; Miao Ding; Xuanze Chen; Lei Chang; Yujie Sun
Journal:  Biomed Opt Express       Date:  2017-05-31       Impact factor: 3.732

Review 6.  New observations in neuroscience using superresolution microscopy.

Authors:  Michihiro Igarashi; Motohiro Nozumi; Ling-Gang Wu; Francesca Cella Zanacchi; István Katona; László Barna; Pingyong Xu; Mingshu Zhang; Fudong Xue; Edward Boyden
Journal:  J Neurosci       Date:  2018-10-31       Impact factor: 6.167

7.  Sodium pump organization in dendritic spines.

Authors:  Hans Blom; Kristoffer Bernhem; Hjalmar Brismar
Journal:  Neurophotonics       Date:  2016-05-04       Impact factor: 3.593

8.  Quantitative super-resolution single molecule microscopy dataset of YFP-tagged growth factor receptors.

Authors:  Tomáš Lukeš; Jakub Pospíšil; Karel Fliegel; Theo Lasser; Guy M Hagen
Journal:  Gigascience       Date:  2018-03-01       Impact factor: 6.524

9.  moxDendra2: an inert photoswitchable protein for oxidizing environments.

Authors:  Andrii A Kaberniuk; Nicholas C Morano; Vladislav V Verkhusha; Erik Lee Snapp
Journal:  Chem Commun (Camb)       Date:  2017-02-09       Impact factor: 6.222

Review 10.  Structure-guided wavelength tuning in far-red fluorescent proteins.

Authors:  Ho-Leung Ng; Michael Z Lin
Journal:  Curr Opin Struct Biol       Date:  2016-07-25       Impact factor: 6.809

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.