Literature DB >> 24894989

Light-responsive control of bacterial gene expression: precise triggering of the lac promoter activity using photocaged IPTG.

Dennis Binder1, Alexander Grünberger, Anita Loeschcke, Christopher Probst, Claus Bier, Jörg Pietruszka, Wolfgang Wiechert, Dietrich Kohlheyer, Karl-Erich Jaeger, Thomas Drepper.   

Abstract

Light can be used to control numerous cellular processes including protein function and interaction as well as gene expression in a non-invasive fashion and with unprecedented spatiotemporal resolution. However, for chemical phototriggers tight, gradual, and homogeneous light response has never been attained in living cells. Here, we report on a light-responsive bacterial T7 RNA polymerase expression system based on a photocaged derivative of the inducer molecule isopropyl-β-d-thiogalactopyranoside (IPTG). We have comparatively analyzed different Escherichia coli lac promoter-regulated expression systems in batch and microfluidic single-cell cultivation. The lacY-deficient E. coli strain Tuner(DE3) harboring additional plasmid-born copies of the lacI gene exhibited a sensitive and defined response to increasing IPTG concentrations. Photocaged IPTG served as a synthetic photo-switch to convert the E. coli system into an optogenetic expression module allowing for precise and gradual light-triggering of gene expression as demonstrated at the single cell level.

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Year:  2014        PMID: 24894989     DOI: 10.1039/c4ib00027g

Source DB:  PubMed          Journal:  Integr Biol (Camb)        ISSN: 1757-9694            Impact factor:   2.192


  15 in total

Review 1.  The application of powerful promoters to enhance gene expression in industrial microorganisms.

Authors:  Shenghu Zhou; Guocheng Du; Zhen Kang; Jianghua Li; Jian Chen; Huazhong Li; Jingwen Zhou
Journal:  World J Microbiol Biotechnol       Date:  2017-01-02       Impact factor: 3.312

Review 2.  Review of methods to probe single cell metabolism and bioenergetics.

Authors:  Andreas E Vasdekis; Gregory Stephanopoulos
Journal:  Metab Eng       Date:  2014-10-31       Impact factor: 9.783

3.  Light-Controlled Cell Factories: Employing Photocaged Isopropyl-β-d-Thiogalactopyranoside for Light-Mediated Optimization of lac Promoter-Based Gene Expression and (+)-Valencene Biosynthesis in Corynebacterium glutamicum.

Authors:  Dennis Binder; Jonas Frohwitter; Regina Mahr; Claus Bier; Alexander Grünberger; Anita Loeschcke; Petra Peters-Wendisch; Dietrich Kohlheyer; Jörg Pietruszka; Julia Frunzke; Karl-Erich Jaeger; Volker F Wendisch; Thomas Drepper
Journal:  Appl Environ Microbiol       Date:  2016-09-30       Impact factor: 4.792

Review 4.  Designing sugar mimetics: non-natural pyranosides as innovative chemical tools.

Authors:  Regis C Saliba; Nicola Lb Pohl
Journal:  Curr Opin Chem Biol       Date:  2016-09-10       Impact factor: 8.822

5.  Optochemical Control of Bacterial Gene Expression: Novel Photocaged Compounds for Different Promoter Systems.

Authors:  Fabian Hogenkamp; Fabienne Hilgers; Nora Lisa Bitzenhofer; Vera Ophoven; Mona Haase; Claus Bier; Dennis Binder; Karl-Erich Jaeger; Thomas Drepper; Jörg Pietruszka
Journal:  Chembiochem       Date:  2021-12-02       Impact factor: 3.461

6.  Light-induced gene expression with photocaged IPTG for induction profiling in a high-throughput screening system.

Authors:  Georg Wandrey; Claus Bier; Dennis Binder; Kyra Hoffmann; Karl-Erich Jaeger; Jörg Pietruszka; Thomas Drepper; Jochen Büchs
Journal:  Microb Cell Fact       Date:  2016-04-23       Impact factor: 5.328

7.  Time-resolved, single-cell analysis of induced and programmed cell death via non-invasive propidium iodide and counterstain perfusion.

Authors:  Christina E M Krämer; Wolfgang Wiechert; Dietrich Kohlheyer
Journal:  Sci Rep       Date:  2016-09-01       Impact factor: 4.379

Review 8.  Advanced Gene Manipulation Methods for Stem Cell Theranostics.

Authors:  Christopher Rathnam; Sy-Tsong Dean Chueng; Letao Yang; Ki-Bum Lee
Journal:  Theranostics       Date:  2017-07-08       Impact factor: 11.556

9.  A Novel and Fast Purification Method for Nucleoside Transporters.

Authors:  Zhenyu Hao; Maren Thomsen; Vincent L G Postis; Amelia Lesiuk; David Sharples; Yingying Wang; Mark Bartlam; Adrian Goldman
Journal:  Front Mol Biosci       Date:  2016-06-09

10.  Comparative Single-Cell Analysis of Different E. coli Expression Systems during Microfluidic Cultivation.

Authors:  Dennis Binder; Christopher Probst; Alexander Grünberger; Fabienne Hilgers; Anita Loeschcke; Karl-Erich Jaeger; Dietrich Kohlheyer; Thomas Drepper
Journal:  PLoS One       Date:  2016-08-15       Impact factor: 3.240

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