Literature DB >> 27520809

Light-Controlled Cell Factories: Employing Photocaged Isopropyl-β-d-Thiogalactopyranoside for Light-Mediated Optimization of lac Promoter-Based Gene Expression and (+)-Valencene Biosynthesis in Corynebacterium glutamicum.

Dennis Binder1, Jonas Frohwitter2, Regina Mahr3, Claus Bier4, Alexander Grünberger3, Anita Loeschcke1, Petra Peters-Wendisch2, Dietrich Kohlheyer3, Jörg Pietruszka5, Julia Frunzke3, Karl-Erich Jaeger6, Volker F Wendisch7, Thomas Drepper8.   

Abstract

Precise control of microbial gene expression resulting in a defined, fast, and homogeneous response is of utmost importance for synthetic bio(techno)logical applications. However, even broadly applied biotechnological workhorses, such as Corynebacterium glutamicum, for which induction of recombinant gene expression commonly relies on the addition of appropriate inducer molecules, perform moderately in this respect. Light offers an alternative to accurately control gene expression, as it allows for simple triggering in a noninvasive fashion with unprecedented spatiotemporal resolution. Thus, optogenetic switches are promising tools to improve the controllability of existing gene expression systems. In this regard, photocaged inducers, whose activities are initially inhibited by light-removable protection groups, represent one of the most valuable photoswitches for microbial gene expression. Here, we report on the evaluation of photocaged isopropyl-β-d-thiogalactopyranoside (IPTG) as a light-responsive control element for the frequently applied tac-based expression module in C. glutamicum In contrast to conventional IPTG, the photocaged inducer mediates a tightly controlled, strong, and homogeneous expression response upon short exposure to UV-A light. To further demonstrate the unique potential of photocaged IPTG for the optimization of production processes in C. glutamicum, the optogenetic switch was finally used to improve biosynthesis of the growth-inhibiting sesquiterpene (+)-valencene, a flavoring agent and aroma compound precursor in food industry. The variation in light intensity as well as the time point of light induction proved crucial for efficient production of this toxic compound. IMPORTANCE: Optogenetic tools are light-responsive modules that allow for a simple triggering of cellular functions with unprecedented spatiotemporal resolution and in a noninvasive fashion. Specifically, light-controlled gene expression exhibits an enormous potential for various synthetic bio(techno)logical purposes. Before our study, poor inducibility, together with phenotypic heterogeneity, was reported for the IPTG-mediated induction of lac-based gene expression in Corynebacterium glutamicum By applying photocaged IPTG as a synthetic inducer, however, these drawbacks could be almost completely abolished. Especially for increasing numbers of parallelized expression cultures, noninvasive and spatiotemporal light induction qualifies for a precise, homogeneous, and thus higher-order control to fully automatize or optimize future biotechnological applications.
Copyright © 2016, American Society for Microbiology. All Rights Reserved.

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Year:  2016        PMID: 27520809      PMCID: PMC5068161          DOI: 10.1128/AEM.01457-16

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  60 in total

1.  Beyond growth rate 0.6: What drives Corynebacterium glutamicum to higher growth rates in defined medium.

Authors:  Simon Unthan; Alexander Grünberger; Jan van Ooyen; Jochem Gätgens; Johanna Heinrich; Nicole Paczia; Wolfgang Wiechert; Dietrich Kohlheyer; Stephan Noack
Journal:  Biotechnol Bioeng       Date:  2013-09-24       Impact factor: 4.530

2.  Pyruvate carboxylase is a major bottleneck for glutamate and lysine production by Corynebacterium glutamicum.

Authors:  P G Peters-Wendisch; B Schiel; V F Wendisch; E Katsoulidis; B Möckel; H Sahm; B J Eikmanns
Journal:  J Mol Microbiol Biotechnol       Date:  2001-04

3.  The baffled microtiter plate: increased oxygen transfer and improved online monitoring in small scale fermentations.

Authors:  Matthias Funke; Sylvia Diederichs; Frank Kensy; Carsten Müller; Jochen Büchs
Journal:  Biotechnol Bioeng       Date:  2009-08-15       Impact factor: 4.530

4.  Characterization of a Corynebacterium glutamicum lactate utilization operon induced during temperature-triggered glutamate production.

Authors:  Corinna Stansen; Davin Uy; Stephane Delaunay; Lothar Eggeling; Jean-Louis Goergen; Volker F Wendisch
Journal:  Appl Environ Microbiol       Date:  2005-10       Impact factor: 4.792

Review 5.  Light-controlled tools.

Authors:  Clara Brieke; Falk Rohrbach; Alexander Gottschalk; Günter Mayer; Alexander Heckel
Journal:  Angew Chem Int Ed Engl       Date:  2012-07-24       Impact factor: 15.336

Review 6.  Single-cell microfluidics: opportunity for bioprocess development.

Authors:  Alexander Grünberger; Wolfgang Wiechert; Dietrich Kohlheyer
Journal:  Curr Opin Biotechnol       Date:  2014-03-16       Impact factor: 9.740

7.  Production of the sesquiterpenoid (+)-nootkatone by metabolic engineering of Pichia pastoris.

Authors:  Tamara Wriessnegger; Peter Augustin; Matthias Engleder; Erich Leitner; Monika Müller; Iwona Kaluzna; Martin Schürmann; Daniel Mink; Günther Zellnig; Helmut Schwab; Harald Pichler
Journal:  Metab Eng       Date:  2014-04-16       Impact factor: 9.783

Review 8.  The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins.

Authors:  Jörn Kalinowski; Brigitte Bathe; Daniela Bartels; Nicole Bischoff; Michael Bott; Andreas Burkovski; Nicole Dusch; Lothar Eggeling; Bernhard J Eikmanns; Lars Gaigalat; Alexander Goesmann; Michael Hartmann; Klaus Huthmacher; Reinhard Krämer; Burkhard Linke; Alice C McHardy; Folker Meyer; Bettina Möckel; Walter Pfefferle; Alfred Pühler; Daniel A Rey; Christian Rückert; Oliver Rupp; Hermann Sahm; Volker F Wendisch; Iris Wiegräbe; Andreas Tauch
Journal:  J Biotechnol       Date:  2003-09-04       Impact factor: 3.307

9.  Studies on transformation of Escherichia coli with plasmids.

Authors:  D Hanahan
Journal:  J Mol Biol       Date:  1983-06-05       Impact factor: 5.469

10.  Application of a genetically encoded biosensor for live cell imaging of L-valine production in pyruvate dehydrogenase complex-deficient Corynebacterium glutamicum strains.

Authors:  Nurije Mustafi; Alexander Grünberger; Regina Mahr; Stefan Helfrich; Katharina Nöh; Bastian Blombach; Dietrich Kohlheyer; Julia Frunzke
Journal:  PLoS One       Date:  2014-01-17       Impact factor: 3.240

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  12 in total

1.  Optochemical Control of Bacterial Gene Expression: Novel Photocaged Compounds for Different Promoter Systems.

Authors:  Fabian Hogenkamp; Fabienne Hilgers; Nora Lisa Bitzenhofer; Vera Ophoven; Mona Haase; Claus Bier; Dennis Binder; Karl-Erich Jaeger; Thomas Drepper; Jörg Pietruszka
Journal:  Chembiochem       Date:  2021-12-02       Impact factor: 3.461

2.  Development of a New Recombineering System for Agrobacterium Species.

Authors:  Zhilong Bian; Shanshan Li; Runyu Yang; Jia Yin; Youming Zhang; Qiang Tu; Jun Fu; Ruijuan Li
Journal:  Appl Environ Microbiol       Date:  2022-01-19       Impact factor: 5.005

3.  Isoprenoid Pyrophosphate-Dependent Transcriptional Regulation of Carotenogenesis in Corynebacterium glutamicum.

Authors:  Nadja A Henke; Sabine A E Heider; Silvin Hannibal; Volker F Wendisch; Petra Peters-Wendisch
Journal:  Front Microbiol       Date:  2017-04-24       Impact factor: 5.640

4.  Discovery of recombinases enables genome mining of cryptic biosynthetic gene clusters in Burkholderiales species.

Authors:  Xue Wang; Haibo Zhou; Hanna Chen; Xiaoshu Jing; Wentao Zheng; Ruijuan Li; Tao Sun; Jiaqi Liu; Jun Fu; Liujie Huo; Yue-Zhong Li; Yuemao Shen; Xiaoming Ding; Rolf Müller; Xiaoying Bian; Youming Zhang
Journal:  Proc Natl Acad Sci U S A       Date:  2018-04-16       Impact factor: 11.205

5.  Patchoulol Production with Metabolically Engineered Corynebacterium glutamicum.

Authors:  Nadja A Henke; Julian Wichmann; Thomas Baier; Jonas Frohwitter; Kyle J Lauersen; Joe M Risse; Petra Peters-Wendisch; Olaf Kruse; Volker F Wendisch
Journal:  Genes (Basel)       Date:  2018-04-17       Impact factor: 4.096

6.  High production of valencene in Saccharomyces cerevisiae through metabolic engineering.

Authors:  Hefeng Chen; Chaoyi Zhu; Muzi Zhu; Jinghui Xiong; Hao Ma; Min Zhuo; Shuang Li
Journal:  Microb Cell Fact       Date:  2019-11-07       Impact factor: 5.328

7.  Multiplexed characterization of rationally designed promoter architectures deconstructs combinatorial logic for IPTG-inducible systems.

Authors:  Timothy C Yu; Winnie L Liu; Marcia S Brinck; Jessica E Davis; Jeremy Shek; Grace Bower; Tal Einav; Kimberly D Insigne; Rob Phillips; Sriram Kosuri; Guillaume Urtecho
Journal:  Nat Commun       Date:  2021-01-12       Impact factor: 14.919

8.  Improved Plasmid-Based Inducible and Constitutive Gene Expression in Corynebacterium glutamicum.

Authors:  Nadja A Henke; Irene Krahn; Volker F Wendisch
Journal:  Microorganisms       Date:  2021-01-19

Review 9.  Controlling gene expression with light: a multidisciplinary endeavour.

Authors:  Denis Hartmann; Jefferson M Smith; Giacomo Mazzotti; Razia Chowdhry; Michael J Booth
Journal:  Biochem Soc Trans       Date:  2020-08-28       Impact factor: 5.407

10.  CRISPRi-Library-Guided Target Identification for Engineering Carotenoid Production by Corynebacterium glutamicum.

Authors:  Vanessa L Göttl; Ina Schmitt; Kristina Braun; Petra Peters-Wendisch; Volker F Wendisch; Nadja A Henke
Journal:  Microorganisms       Date:  2021-03-24
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