Literature DB >> 24886889

Programmed DNA elimination in multicellular organisms.

Jianbin Wang1, Richard E Davis2.   

Abstract

Genetic information typically remains constant in all cells throughout the life cycle of most organisms. However, there are exceptions where DNA elimination is an integral, developmental program for some organisms, associated with generating distinct germline versus somatic genomes. Programmed DNA elimination occurs in unicellular ciliates and diverse metazoa ranging from nematodes to vertebrates. DNA elimination can occur through chromosome breakage and selective loss of chromosome regions or the elimination of individual chromosomes. Recent studies provide compelling evidence that DNA elimination is a novel form of gene silencing, dosage compensation, and sex determination. Further identification of the eliminated sequences, genome changes, and in depth characterization of this phenomenon in diverse metazoans is needed to shed new light on the functions and mechanisms of this regulated process.
Copyright © 2014 Elsevier Ltd. All rights reserved.

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Year:  2014        PMID: 24886889      PMCID: PMC4125452          DOI: 10.1016/j.gde.2014.03.012

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  66 in total

1.  Differential acetylation of histones H3 and H4 in paternal and maternal germline chromosomes during development of sciarid flies.

Authors:  Clara Goday; M Fernanda Ruiz
Journal:  J Cell Sci       Date:  2002-12-15       Impact factor: 5.285

2.  Genetics, chromatin diminution, and sex chromosome evolution in the parasitic nematode genus Strongyloides.

Authors:  Linda Nemetschke; Alexander G Eberhardt; Hubertus Hertzberg; Adrian Streit
Journal:  Curr Biol       Date:  2010-09-09       Impact factor: 10.834

3.  Programmed loss of millions of base pairs from a vertebrate genome.

Authors:  Jeramiah J Smith; Francesca Antonacci; Evan E Eichler; Chris T Amemiya
Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-26       Impact factor: 11.205

4.  Ascaris DNA topoisomerase I binds preferentially to the germ-line- limited DNA.

Authors:  P Jansen; K B Moritz
Journal:  Naturwissenschaften       Date:  1986-12

5.  Organization and dynamics of satellite and telomere DNAs in Ascaris: implications for formation and programmed breakdown of compound chromosomes.

Authors:  J Niedermaier; K B Moritz
Journal:  Chromosoma       Date:  2000-11       Impact factor: 4.316

6.  Genetic consequences of programmed genome rearrangement.

Authors:  Jeramiah J Smith; Carl Baker; Evan E Eichler; Chris T Amemiya
Journal:  Curr Biol       Date:  2012-07-19       Impact factor: 10.834

7.  Highly repetitive DNA sequences that are restricted to the germ line in the hagfish Eptatretus cirrhatus: a mosaic of eliminated elements.

Authors:  Y Goto; S Kubota; S Kohno
Journal:  Chromosoma       Date:  1998-03       Impact factor: 4.316

8.  Chromatin diminution in the copepod Mesocyclops edax: diminution of tandemly repeated DNA families from somatic cells.

Authors:  Guy Drouin
Journal:  Genome       Date:  2006-06       Impact factor: 2.166

9.  Sex chromosome mosaicism in the marsupial genera Isoodon and Perameles.

Authors:  D L Hayman; P G Martin
Journal:  Genetics       Date:  1965-12       Impact factor: 4.562

Review 10.  Chromatin diminution in nematode development.

Authors:  H Tobler; A Etter; F Müller
Journal:  Trends Genet       Date:  1992-12       Impact factor: 11.639

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  55 in total

1.  RNA-template dependent de novo telomere addition.

Authors:  Gloria Fuhrmann; Franziska Jönsson; Patrick Philipp Weil; Jan Postberg; Hans J Lipps
Journal:  RNA Biol       Date:  2016-01-19       Impact factor: 4.652

2.  Post-meiotic B chromosome expulsion, during spermiogenesis, in two grasshopper species.

Authors:  Josefa Cabrero; María Martín-Peciña; Francisco J Ruiz-Ruano; Ricardo Gómez; Juan Pedro M Camacho
Journal:  Chromosoma       Date:  2017-02-11       Impact factor: 4.316

3.  Todos Santos small RNA symposium.

Authors:  Lindsay P Winkenbach; Rachel Doser; Kailee J Reed; Amy E Pasquinelli; Carolyn M Phillips; Julie M Claycomb
Journal:  RNA Biol       Date:  2019-08-09       Impact factor: 4.652

4.  On the origin and evolution of germline chromosomes in songbirds.

Authors:  Bengt Hansson
Journal:  Proc Natl Acad Sci U S A       Date:  2019-05-29       Impact factor: 11.205

Review 5.  Animal regeneration: ancestral character or evolutionary novelty?

Authors:  Jonathan Mw Slack
Journal:  EMBO Rep       Date:  2017-07-26       Impact factor: 8.807

6.  Deep ancestry of programmed genome rearrangement in lampreys.

Authors:  Vladimir A Timoshevskiy; Ralph T Lampman; Jon E Hess; Laurie L Porter; Jeramiah J Smith
Journal:  Dev Biol       Date:  2017-06-30       Impact factor: 3.582

7.  Characterization and Evolution of Germ1, an Element that Undergoes Diminution in Lampreys (Cyclostomata: Petromyzontidae).

Authors:  Rex Meade Strange; Landon L Moore
Journal:  J Mol Evol       Date:  2019-09-05       Impact factor: 2.395

8.  EMBRYONIC DEVELOPMENT AND A QUANTITATIVE MODEL OF PROGRAMMED DNA ELIMINATION IN MESOCYCLOPS EDAX (S. A. FORBES, 1891) (COPEPODA: CYCLOPOIDA).

Authors:  Michelle K Clower; Ashton S Holub; Rebecca T Smith; Grace A Wyngaard
Journal:  J Crustacean Biol       Date:  2016       Impact factor: 1.430

Review 9.  Repeat-Induced Point Mutation and Other Genome Defense Mechanisms in Fungi.

Authors:  Eugene Gladyshev
Journal:  Microbiol Spectr       Date:  2017-07

10.  Characterization of the satellitome in lower vascular plants: the case of the endangered fern Vandenboschia speciosa.

Authors:  F J Ruiz-Ruano; B Navarro-Domínguez; J P M Camacho; M A Garrido-Ramos
Journal:  Ann Bot       Date:  2019-03-14       Impact factor: 4.357

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