Literature DB >> 27857452

EMBRYONIC DEVELOPMENT AND A QUANTITATIVE MODEL OF PROGRAMMED DNA ELIMINATION IN MESOCYCLOPS EDAX (S. A. FORBES, 1891) (COPEPODA: CYCLOPOIDA).

Michelle K Clower1, Ashton S Holub2, Rebecca T Smith3, Grace A Wyngaard2.   

Abstract

The highly programmed fragmentation of chromosomes and elimination of large amounts of nuclear DNA from the presomatic cell lineages (i.e., chromatin diminution), occurs in the embryos of the freshwater zooplankton Mesocyclops edax (S. A. Forbes, 1891) (Crustacea: Copepoda). The somatic genome is reorganized and reduced to a size five times smaller even though the germline genome remains intact. We present the first comprehensive, quantitative model of DNA content throughout embryogenesis in a copepod that possesses embryonic DNA elimination. We used densitometric image analysis to measure the DNA content of polar bodies, germline and somatic nuclei, and excised DNA "droplets." We report: 1) variable DNA contents of polar bodies, some of which do not contain the amount corresponding to the haploid germline genome size; 2) presence of pronuclei in newly laid embryo sacs; 3) gonomeric chromosomes in the second to fourth cleavage divisions and in the primordial germ cell and primordial endoderm cell during the fifth cleavage division; 4) timing of early embryonic cell stages, elimination of DNA, and divisions of the primordial germ cell and primordial endoderm cell at 22°C; and 5) persistence of a portion of the excised DNA "droplets" throughout embryogenesis. DNA elimination is a trait that spans multiple embryonic stages and a knowledge of the timing and variability of the associated cytological events with DNA elimination will promote the study of the molecular mechanisms involved in this trait. We propose the "genome yolk hypothesis" as a functional explanation for the persistence of the eliminated DNA that might serve as a resource during postdiminution cleavage divisions.

Entities:  

Keywords:  chromatin diminution; densitometric image analysis; genome size; polar body; primoridal germ cell

Year:  2016        PMID: 27857452      PMCID: PMC5110247          DOI: 10.1163/1937240X-00002473

Source DB:  PubMed          Journal:  J Crustacean Biol        ISSN: 0278-0372            Impact factor:   1.430


  38 in total

Review 1.  Chromatin elimination--an oddity or a common mechanism in differentiation and development?

Authors:  M Kloc; B Zagrodzinska
Journal:  Differentiation       Date:  2001-09       Impact factor: 3.880

2.  Temporal control of DNA replication and the adaptive value of chromatin diminution in copepods.

Authors:  G A Wyngaard; T R Gregory
Journal:  J Exp Zool       Date:  2001-12-15

3.  Evidence for endoreduplication: germ cell DNA levels prior to chromatin diminution in Mesocyclops edax.

Authors:  E M Rasch; G A Wyngaard
Journal:  J Histochem Cytochem       Date:  2001-06       Impact factor: 2.479

4.  From pixels to picograms: a beginners' guide to genome quantification by Feulgen image analysis densitometry.

Authors:  David C Hardie; T Ryan Gregory; Paul D N Hebert
Journal:  J Histochem Cytochem       Date:  2002-06       Impact factor: 2.479

5.  Feulgen-DNA cytophotometry for estimating C values.

Authors:  Ellen M Rasch
Journal:  Methods Mol Biol       Date:  2004

6.  Nuclear DNA content and genome size of trout and human.

Authors:  J Dolezel; J Bartos; H Voglmayr; J Greilhuber
Journal:  Cytometry A       Date:  2003-02       Impact factor: 4.355

7.  Evolution of developmentally regulated genome rearrangements in eukaryotes.

Authors:  Rebecca A Zufall; Tessa Robinson; Laura A Katz
Journal:  J Exp Zool B Mol Dev Evol       Date:  2005-09-15       Impact factor: 2.656

8.  Chromatin diminution in the copepod Mesocyclops edax: diminution of tandemly repeated DNA families from somatic cells.

Authors:  Guy Drouin
Journal:  Genome       Date:  2006-06       Impact factor: 2.166

9.  Unusual variations in nuclear DNA contents in the marine copepod Pseudocalanus.

Authors:  J H Robins; I A McLaren
Journal:  Can J Genet Cytol       Date:  1982

10.  Germ line-restricted, highly repeated DNA sequences and their chromosomal localization in a Japanese hagfish (Eptatretus okinoseanus).

Authors:  S Kubota; M Kuro-o; S Mizuno; S Kohno
Journal:  Chromosoma       Date:  1993-02       Impact factor: 4.316

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  3 in total

1.  The salmon louse genome may be much larger than sequencing suggests.

Authors:  Grace A Wyngaard; Rasmus Skern-Mauritzen; Ketil Malde; Rachel Prendergast; Stefano Peruzzi
Journal:  Sci Rep       Date:  2022-04-22       Impact factor: 4.996

Review 2.  Delete and survive: strategies of programmed genetic material elimination in eukaryotes.

Authors:  Dmitrij Dedukh; Alla Krasikova
Journal:  Biol Rev Camb Philos Soc       Date:  2021-09-20

3.  Comprehensive Chromosome End Remodeling during Programmed DNA Elimination.

Authors:  Jianbin Wang; Giovana M B Veronezi; Yuanyuan Kang; Maxim Zagoskin; Eileen T O'Toole; Richard E Davis
Journal:  Curr Biol       Date:  2020-07-16       Impact factor: 10.834

  3 in total

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