Literature DB >> 24878341

Parts, assembly and operation of the RIG-I family of motors.

David C Rawling1, Anna Marie Pyle2.   

Abstract

Host cell invasion is monitored by a series of pattern recognition receptors (PRRs) that activate the innate immune machinery upon detection of a cognate pathogen associated molecular pattern (PAMP). The RIG-I like receptor (RLR) family of PRRs includes three proteins--RIG-I, MDA5, and LGP2--responsible for the detection of intracellular pathogenic RNA. All RLR proteins are built around an ATPase core homologous to those found in canonical Superfamily 2 (SF2) RNA helicases, which has been modified through the addition of novel accessory domains to recognize duplex RNA. This review focuses on the structural bases for pathogen-specific dsRNA binding and ATPase activation in RLRs, differential RNA recognition by RLR family members, and implications for other duplex RNA activated ATPases, such as Dicer.
Copyright © 2013 Elsevier Ltd. All rights reserved.

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Year:  2013        PMID: 24878341      PMCID: PMC4070197          DOI: 10.1016/j.sbi.2013.11.011

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  55 in total

1.  Nonself RNA-sensing mechanism of RIG-I helicase and activation of antiviral immune responses.

Authors:  Kiyohiro Takahasi; Mitsutoshi Yoneyama; Tatsuya Nishihori; Reiko Hirai; Hiroyuki Kumeta; Ryo Narita; Michael Gale; Fuyuhiko Inagaki; Takashi Fujita
Journal:  Mol Cell       Date:  2008-01-31       Impact factor: 17.970

2.  Evolution of MDA-5/RIG-I-dependent innate immunity: independent evolution by domain grafting.

Authors:  Devanand Sarkar; Rob Desalle; Paul B Fisher
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-29       Impact factor: 11.205

3.  RIG-I detects viral genomic RNA during negative-strand RNA virus infection.

Authors:  Jan Rehwinkel; Choon Ping Tan; Delphine Goubau; Oliver Schulz; Andreas Pichlmair; Katja Bier; Nicole Robb; Frank Vreede; Wendy Barclay; Ervin Fodor; Caetano Reis e Sousa
Journal:  Cell       Date:  2010-02-05       Impact factor: 41.582

Review 4.  Structural basis of innate immune recognition of viral RNA.

Authors:  Ian C Berke; Yue Li; Yorgo Modis
Journal:  Cell Microbiol       Date:  2012-11-21       Impact factor: 3.715

5.  Structural basis for dsRNA recognition, filament formation, and antiviral signal activation by MDA5.

Authors:  Bin Wu; Alys Peisley; Claire Richards; Hui Yao; Xiaohui Zeng; Cecilie Lin; Feixia Chu; Thomas Walz; Sun Hur
Journal:  Cell       Date:  2012-12-27       Impact factor: 41.582

Review 6.  RNA helicases at work: binding and rearranging.

Authors:  Eckhard Jankowsky
Journal:  Trends Biochem Sci       Date:  2011-01       Impact factor: 13.807

7.  Recognition of 5' triphosphate by RIG-I helicase requires short blunt double-stranded RNA as contained in panhandle of negative-strand virus.

Authors:  Martin Schlee; Andreas Roth; Veit Hornung; Cristina Amparo Hagmann; Vera Wimmenauer; Winfried Barchet; Christoph Coch; Markus Janke; Aleksandra Mihailovic; Greg Wardle; Stefan Juranek; Hiroki Kato; Taro Kawai; Hendrik Poeck; Katherine A Fitzgerald; Osamu Takeuchi; Shizuo Akira; Thomas Tuschl; Eicke Latz; Janos Ludwig; Gunther Hartmann
Journal:  Immunity       Date:  2009-07-02       Impact factor: 31.745

8.  Essential role of the N-terminal domain in the regulation of RIG-I ATPase activity.

Authors:  Peter Gee; Pong Kian Chua; Jirair Gevorkyan; Klaus Klumpp; Isabel Najera; David C Swinney; Jerome Deval
Journal:  J Biol Chem       Date:  2008-02-11       Impact factor: 5.157

9.  Visualizing the determinants of viral RNA recognition by innate immune sensor RIG-I.

Authors:  Dahai Luo; Andrew Kohlway; Adriana Vela; Anna Marie Pyle
Journal:  Structure       Date:  2012-09-27       Impact factor: 5.006

10.  Conformational changes of a Swi2/Snf2 ATPase during its mechano-chemical cycle.

Authors:  Robert Lewis; Harald Dürr; Karl-Peter Hopfner; Jens Michaelis
Journal:  Nucleic Acids Res       Date:  2008-02-11       Impact factor: 16.971

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  29 in total

1.  Severe viral respiratory infections in children with IFIH1 loss-of-function mutations.

Authors:  Samira Asgari; Luregn J Schlapbach; Stéphanie Anchisi; Christian Hammer; Istvan Bartha; Thomas Junier; Geneviève Mottet-Osman; Klara M Posfay-Barbe; David Longchamp; Martin Stocker; Samuel Cordey; Laurent Kaiser; Thomas Riedel; Tony Kenna; Deborah Long; Andreas Schibler; Amalio Telenti; Caroline Tapparel; Paul J McLaren; Dominique Garcin; Jacques Fellay
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-17       Impact factor: 11.205

Review 2.  Structural biology of innate immunity.

Authors:  Qian Yin; Tian-Min Fu; Jixi Li; Hao Wu
Journal:  Annu Rev Immunol       Date:  2015-01-22       Impact factor: 28.527

Review 3.  Filament assemblies in foreign nucleic acid sensors.

Authors:  Jungsan Sohn; Sun Hur
Journal:  Curr Opin Struct Biol       Date:  2016-02-07       Impact factor: 6.809

4.  Influenza virus adaptation PB2-627K modulates nucleocapsid inhibition by the pathogen sensor RIG-I.

Authors:  Michaela Weber; Hanna Sediri; Ulrike Felgenhauer; Ina Binzen; Sebastian Bänfer; Ralf Jacob; Linda Brunotte; Adolfo García-Sastre; Jonathan L Schmid-Burgk; Tobias Schmidt; Veit Hornung; Georg Kochs; Martin Schwemmle; Hans-Dieter Klenk; Friedemann Weber
Journal:  Cell Host Microbe       Date:  2015-02-19       Impact factor: 21.023

Review 5.  LGP2 synergy with MDA5 in RLR-mediated RNA recognition and antiviral signaling.

Authors:  Annie M Bruns; Curt M Horvath
Journal:  Cytokine       Date:  2015-03-18       Impact factor: 3.861

Review 6.  Sensing viral RNAs by Dicer/RIG-I like ATPases across species.

Authors:  Simona Paro; Jean-Luc Imler; Carine Meignin
Journal:  Curr Opin Immunol       Date:  2015-02-03       Impact factor: 7.486

7.  Exploring the Human-Nipah Virus Protein-Protein Interactome.

Authors:  Luis Martinez-Gil; Natalia M Vera-Velasco; Ismael Mingarro
Journal:  J Virol       Date:  2017-11-14       Impact factor: 5.103

8.  Selective RNA targeting and regulated signaling by RIG-I is controlled by coordination of RNA and ATP binding.

Authors:  Megan E Fitzgerald; David C Rawling; Olga Potapova; Xiaoming Ren; Andrew Kohlway; Anna Marie Pyle
Journal:  Nucleic Acids Res       Date:  2017-02-17       Impact factor: 16.971

9.  The RIG-I ATPase core has evolved a functional requirement for allosteric stabilization by the Pincer domain.

Authors:  David C Rawling; Andrew S Kohlway; Dahai Luo; Steve C Ding; Anna Marie Pyle
Journal:  Nucleic Acids Res       Date:  2014-09-12       Impact factor: 16.971

10.  Molecular imprinting as a signal-activation mechanism of the viral RNA sensor RIG-I.

Authors:  Bin Wu; Alys Peisley; David Tetrault; Zongli Li; Edward H Egelman; Katharine E Magor; Thomas Walz; Pawel A Penczek; Sun Hur
Journal:  Mol Cell       Date:  2014-07-10       Impact factor: 17.970

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