Literature DB >> 24874786

FLP/FRT and Cre/lox recombination technology in C. elegans.

E Jane Albert Hubbard1.   

Abstract

One of the most powerful aspects of biological inquiry using model organisms is the ability to control gene expression. A holy grail is both temporal and spatial control of the expression of specific gene products - that is, the ability to express or withhold the activity of genes or their products in specific cells at specific times. Ideally such a method would also regulate the precise levels of gene activity, and alterations would be reversible. The related goal of controlled or purposefully randomized expression of visible markers is also tremendously powerful. While not all of these feats have been accomplished in Caenorhabditis elegans to date, much progress has been made, and recent technologies put these goals within closer reach. Here, I present published examples of successful two-component site-specific recombination in C. elegans. These technologies are based on the principle of controlled intra-molecular excision or inversion of DNA sequences between defined sites, as driven by FLP or Cre recombinases. I discuss several prospects for future applications of this technology.
Copyright © 2014 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Excision; Heat-shock; Inversion; Recombinase; Two-component system

Mesh:

Substances:

Year:  2014        PMID: 24874786      PMCID: PMC4210360          DOI: 10.1016/j.ymeth.2014.05.007

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  37 in total

1.  Engineering the Caenorhabditis elegans genome with CRISPR/Cas9.

Authors:  Selma Waaijers; Mike Boxem
Journal:  Methods       Date:  2014-03-28       Impact factor: 3.608

2.  Flybow: genetic multicolor cell labeling for neural circuit analysis in Drosophila melanogaster.

Authors:  Dafni Hadjieconomou; Shay Rotkopf; Cyrille Alexandre; Donald M Bell; Barry J Dickson; Iris Salecker
Journal:  Nat Methods       Date:  2011-02-06       Impact factor: 28.547

3.  The FLP recombinase of yeast catalyzes site-specific recombination in the Drosophila genome.

Authors:  K G Golic; S Lindquist
Journal:  Cell       Date:  1989-11-03       Impact factor: 41.582

4.  Organizing activity of wingless protein in Drosophila.

Authors:  G Struhl; K Basler
Journal:  Cell       Date:  1993-02-26       Impact factor: 41.582

5.  Insulin/Insulin-like growth factor signaling controls non-Dauer developmental speed in the nematode Caenorhabditis elegans.

Authors:  Anne-Françoise Ruaud; Iskra Katic; Jean-Louis Bessereau
Journal:  Genetics       Date:  2010-10-13       Impact factor: 4.562

6.  The Caenorhabditis elegans APC-related gene apr-1 is required for epithelial cell migration and Hox gene expression.

Authors:  E F Hoier; W A Mohler; S K Kim; A Hajnal
Journal:  Genes Dev       Date:  2000-04-01       Impact factor: 11.361

7.  Temporal control of cell-specific transgene expression in Caenorhabditis elegans.

Authors:  Taulant Bacaj; Shai Shaham
Journal:  Genetics       Date:  2007-07-01       Impact factor: 4.562

8.  Controlling gene expression with the Q repressible binary expression system in Caenorhabditis elegans.

Authors:  Xing Wei; Christopher J Potter; Liqun Luo; Kang Shen
Journal:  Nat Methods       Date:  2012-03-11       Impact factor: 28.547

9.  Serotonin and the neuropeptide PDF initiate and extend opposing behavioral states in C. elegans.

Authors:  Steven W Flavell; Navin Pokala; Evan Z Macosko; Dirk R Albrecht; Johannes Larsch; Cornelia I Bargmann
Journal:  Cell       Date:  2013-08-22       Impact factor: 41.582

10.  Gene activation using FLP recombinase in C. elegans.

Authors:  M Wayne Davis; J Jason Morton; Dana Carroll; Erik M Jorgensen
Journal:  PLoS Genet       Date:  2008-03-21       Impact factor: 5.917

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  23 in total

1.  SapTrap, a Toolkit for High-Throughput CRISPR/Cas9 Gene Modification in Caenorhabditis elegans.

Authors:  Matthew L Schwartz; Erik M Jorgensen
Journal:  Genetics       Date:  2016-02-02       Impact factor: 4.562

2.  Autism-associated missense genetic variants impact locomotion and neurodevelopment in Caenorhabditis elegans.

Authors:  Wan-Rong Wong; Katherine I Brugman; Shayda Maher; Jun Young Oh; Kevin Howe; Mihoko Kato; Paul W Sternberg
Journal:  Hum Mol Genet       Date:  2019-07-01       Impact factor: 6.150

3.  Expanding the C. elegans toolbox into a toolshed.

Authors:  Arjumand Ghazi; Judith Yanowitz; Gary A Silverman
Journal:  Methods       Date:  2014-08-01       Impact factor: 3.608

4.  A toolkit for GFP-mediated tissue-specific protein degradation in C. elegans.

Authors:  Shaohe Wang; Ngang Heok Tang; Pablo Lara-Gonzalez; Zhiling Zhao; Dhanya K Cheerambathur; Bram Prevo; Andrew D Chisholm; Arshad Desai; Karen Oegema
Journal:  Development       Date:  2017-06-15       Impact factor: 6.868

Review 5.  The Caenorhabditis elegans Transgenic Toolbox.

Authors:  Jeremy Nance; Christian Frøkjær-Jensen
Journal:  Genetics       Date:  2019-08       Impact factor: 4.562

6.  An Efficient FLP-Based Toolkit for Spatiotemporal Control of Gene Expression in Caenorhabditis elegans.

Authors:  Celia Muñoz-Jiménez; Cristina Ayuso; Agnieszka Dobrzynska; Antonio Torres-Mendéz; Patricia de la Cruz Ruiz; Peter Askjaer
Journal:  Genetics       Date:  2017-06-23       Impact factor: 4.562

7.  The IntXO-PSL Recombination System Is a Key Component of the Second Maintenance System for Bacillus anthracis Plasmid pXO1.

Authors:  Andrei P Pomerantsev; Catherine Rappole; Zanetta Chang; Margaret Chahoud; Stephen H Leppla
Journal:  J Bacteriol       Date:  2016-06-27       Impact factor: 3.490

Review 8.  Getting Down to Specifics: Profiling Gene Expression and Protein-DNA Interactions in a Cell Type-Specific Manner.

Authors:  Colin D McClure; Tony D Southall
Journal:  Adv Genet       Date:  2015-07-23       Impact factor: 1.944

9.  Site-Specific Recombination with Inverted Target Sites: A Cautionary Tale of Dicentric and Acentric Chromosomes.

Authors:  Simon W A Titen; Makenna T B Johnson; Mario Capecchi; Kent G Golic
Journal:  Genetics       Date:  2020-06-25       Impact factor: 4.562

10.  Assembly of synaptic active zones requires phase separation of scaffold molecules.

Authors:  Nathan A McDonald; Richard D Fetter; Kang Shen
Journal:  Nature       Date:  2020-11-18       Impact factor: 49.962

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