Literature DB >> 24860411

2-[2-(2-Nitro-phen-yl)-4,5-diphenyl-1H-imidazol-1-yl]-3-phenyl-propan-1-ol.

Yizhen Li1, Pu Mao1, Yongmei Xiao1, Liangru Yang1, Lingbo Qu1.   

Abstract

In the title compound, C30H25N3O3, the central imidazole ring forms dihedral angles of 77.34 (6), 12.56 (6) and 87.04 (6)°, respectively, with the o-nitro-benzene ring and the phenyl substituents in the 5- and 4-positions. The mol-ecular conformation is stabilized by weak intra-molecular C-H⋯π inter-actions. In the crystal, mol-ecules are linked by O-H⋯N hydrogen bonds, forming chains running parallel to the b-axis direction.

Entities:  

Year:  2014        PMID: 24860411      PMCID: PMC4011293          DOI: 10.1107/S1600536814008770

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of imidazole derivatives, see: Ding et al. (2005 ▶); Heightman & Vasella (1999 ▶); Wasserscheid & Keim (2000 ▶). For related compounds synthesized by our group, see: Gao, Yang et al. (2013 ▶); Gao, Wang et al. (2013 ▶); Mao et al. (2010 ▶); Yang et al. (2012 ▶); Xiao et al. (2012 ▶).

Experimental

Crystal data

C30H25N3O3 M = 475.53 Orthorhombic, a = 10.54812 (16) Å b = 12.77836 (19) Å c = 18.4800 (3) Å V = 2490.87 (6) Å3 Z = 4 Cu Kα radiation μ = 0.67 mm−1 T = 291 K 0.25 × 0.22 × 0.20 mm

Data collection

Agilent Xcalibur (Eos, Gemini) diffractometer Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011 ▶) T min = 0.638, T max = 1.000 23649 measured reflections 4460 independent reflections 4263 reflections with I > 2σ(I) R int = 0.054

Refinement

R[F 2 > 2σ(F 2)] = 0.038 wR(F 2) = 0.111 S = 1.05 4460 reflections 330 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.16 e Å−3 Δρmin = −0.14 e Å−3 Absolute structure: Flack (1983 ▶); 1925 Friedel pairs Absolute structure parameter: 0.2 (2) Data collection: CrysAlis PRO (Agilent, 2011 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: OLEX2 (Dolomanov et al., 2009 ▶); software used to prepare material for publication: OLEX2. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536814008770/rz5116sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814008770/rz5116Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814008770/rz5116Isup3.cml CCDC reference: 997919 Additional supporting information: crystallographic information; 3D view; checkCIF report
C30H25N3O3Dx = 1.268 Mg m3
Mr = 475.53Cu Kα radiation, λ = 1.5418 Å
Orthorhombic, P212121Cell parameters from 12200 reflections
a = 10.54812 (16) Åθ = 4.2–72.5°
b = 12.77836 (19) ŵ = 0.67 mm1
c = 18.4800 (3) ÅT = 291 K
V = 2490.87 (6) Å3, yellow
Z = 40.25 × 0.22 × 0.20 mm
F(000) = 1000
Agilent Xcalibur (Eos, Gemini) diffractometer4460 independent reflections
Radiation source: Enhance (Cu) X-ray Source4263 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.054
Detector resolution: 16.2312 pixels mm-1θmax = 67.1°, θmin = 4.2°
ω scansh = −12→12
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011)k = −15→14
Tmin = 0.638, Tmax = 1.000l = −22→21
23649 measured reflections
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH atoms treated by a mixture of independent and constrained refinement
R[F2 > 2σ(F2)] = 0.038w = 1/[σ2(Fo2) + (0.0732P)2 + 0.1165P] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.111(Δ/σ)max = 0.001
S = 1.05Δρmax = 0.16 e Å3
4460 reflectionsΔρmin = −0.14 e Å3
330 parametersExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
0 restraintsExtinction coefficient: 0.0020 (3)
Primary atom site location: structure-invariant direct methodsAbsolute structure: Flack (1983); 1925 Friedel pairs
Secondary atom site location: difference Fourier mapAbsolute structure parameter: 0.2 (2)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.3588 (2)0.84256 (18)0.76549 (10)0.0943 (6)
O20.2703 (2)0.8468 (2)0.86999 (14)0.1240 (9)
O30.69834 (12)0.98409 (9)0.67498 (6)0.0495 (3)
N10.42502 (13)0.60777 (11)0.72217 (7)0.0421 (3)
N20.58116 (12)0.71200 (10)0.68724 (7)0.0381 (3)
N30.3581 (2)0.82279 (15)0.82985 (10)0.0720 (5)
C10.2345 (2)0.50148 (18)0.63890 (11)0.0643 (5)
H10.22490.50900.68870.077*
C20.1417 (3)0.4507 (2)0.59907 (14)0.0823 (8)
H20.06990.42490.62220.099*
C30.1554 (3)0.43820 (18)0.52542 (13)0.0763 (7)
H3A0.09290.40430.49880.092*
C40.2609 (2)0.47571 (15)0.49166 (11)0.0629 (5)
H40.27040.46670.44200.075*
C50.3536 (2)0.52686 (14)0.53059 (10)0.0537 (4)
H50.42510.55210.50680.064*
C60.34175 (17)0.54120 (12)0.60510 (9)0.0450 (4)
C70.43445 (15)0.60224 (12)0.64747 (8)0.0406 (3)
C80.53212 (15)0.66520 (12)0.62466 (8)0.0393 (3)
C90.58588 (15)0.67981 (14)0.55083 (8)0.0442 (4)
C100.54220 (18)0.75864 (16)0.50552 (9)0.0537 (4)
H100.48090.80530.52190.064*
C110.5900 (3)0.7680 (2)0.43568 (10)0.0741 (7)
H110.56110.82140.40580.089*
C120.6789 (3)0.6993 (3)0.41067 (11)0.0847 (8)
H120.71110.70640.36410.102*
C130.7207 (2)0.6199 (2)0.45434 (13)0.0817 (8)
H130.78030.57250.43700.098*
C140.6749 (2)0.60967 (18)0.52423 (11)0.0624 (5)
H140.70390.55550.55350.075*
C150.51231 (14)0.67378 (12)0.74329 (8)0.0390 (3)
C160.53902 (15)0.70021 (13)0.82028 (8)0.0434 (3)
C170.46705 (19)0.76810 (14)0.86142 (9)0.0518 (4)
C180.4959 (3)0.78953 (19)0.93326 (12)0.0753 (7)
H180.44610.83570.95970.090*
C190.5983 (3)0.7422 (2)0.96475 (11)0.0810 (8)
H190.61880.75671.01260.097*
C200.6698 (2)0.6741 (2)0.92610 (12)0.0805 (7)
H200.73920.64190.94770.097*
C210.64027 (19)0.6518 (2)0.85425 (11)0.0640 (5)
H210.68920.60370.82880.077*
C220.8477 (2)0.58423 (16)0.71153 (13)0.0613 (5)
H220.79360.55920.67580.074*
C230.9023 (2)0.51434 (18)0.75950 (16)0.0775 (7)
H230.88330.44340.75640.093*
C240.9841 (3)0.5492 (2)0.81139 (19)0.0896 (8)
H241.02020.50260.84400.108*
C251.0122 (3)0.6533 (3)0.81481 (19)0.0993 (9)
H251.07020.67710.84890.119*
C260.9552 (2)0.7242 (2)0.76789 (14)0.0747 (6)
H260.97370.79510.77190.090*
C270.87162 (15)0.69031 (15)0.71554 (10)0.0503 (4)
C280.80645 (16)0.76837 (14)0.66683 (10)0.0488 (4)
H28A0.79990.73900.61860.059*
H28B0.85810.83100.66370.059*
C290.67331 (14)0.79849 (12)0.69335 (8)0.0400 (3)
H290.68110.81450.74500.048*
C300.62316 (17)0.89749 (13)0.65685 (9)0.0475 (4)
H30A0.62330.88800.60480.057*
H30B0.53650.91000.67210.057*
H30.658 (2)1.023 (2)0.7087 (16)0.078 (8)*
U11U22U33U12U13U23
O10.1086 (13)0.1066 (14)0.0678 (10)0.0422 (12)0.0073 (10)0.0090 (10)
O20.1259 (17)0.139 (2)0.1075 (16)0.0540 (16)0.0522 (14)0.0077 (15)
O30.0666 (7)0.0394 (6)0.0426 (6)−0.0080 (5)0.0105 (5)−0.0074 (5)
N10.0531 (7)0.0423 (7)0.0309 (6)−0.0089 (6)−0.0013 (5)0.0044 (5)
N20.0465 (6)0.0352 (6)0.0327 (6)−0.0033 (5)0.0020 (5)0.0004 (5)
N30.0920 (12)0.0620 (10)0.0621 (11)0.0134 (10)0.0226 (9)−0.0047 (9)
C10.0784 (12)0.0682 (12)0.0464 (9)−0.0281 (11)−0.0132 (9)0.0115 (9)
C20.0859 (15)0.0888 (17)0.0722 (14)−0.0435 (14)−0.0203 (12)0.0142 (13)
C30.0934 (16)0.0622 (12)0.0735 (14)−0.0236 (12)−0.0397 (13)0.0008 (11)
C40.0942 (14)0.0472 (10)0.0472 (10)−0.0038 (10)−0.0249 (10)−0.0031 (8)
C50.0724 (11)0.0451 (9)0.0437 (9)−0.0043 (8)−0.0091 (8)−0.0001 (7)
C60.0598 (9)0.0357 (7)0.0394 (8)−0.0048 (7)−0.0119 (7)0.0042 (6)
C70.0541 (8)0.0361 (7)0.0317 (7)−0.0021 (7)−0.0034 (6)0.0030 (6)
C80.0513 (7)0.0361 (7)0.0307 (7)−0.0014 (6)−0.0013 (6)−0.0003 (6)
C90.0524 (8)0.0475 (8)0.0328 (7)−0.0097 (7)0.0019 (6)−0.0037 (6)
C100.0671 (10)0.0579 (10)0.0361 (8)−0.0133 (8)−0.0060 (7)0.0053 (7)
C110.0982 (16)0.0879 (16)0.0363 (9)−0.0388 (14)−0.0085 (10)0.0109 (10)
C120.0977 (16)0.120 (2)0.0368 (9)−0.0439 (17)0.0187 (11)−0.0152 (12)
C130.0776 (13)0.109 (2)0.0584 (13)−0.0133 (14)0.0205 (11)−0.0371 (14)
C140.0686 (11)0.0683 (12)0.0503 (10)0.0008 (10)0.0058 (8)−0.0157 (9)
C150.0498 (7)0.0369 (7)0.0303 (7)−0.0031 (6)0.0016 (6)0.0020 (6)
C160.0535 (8)0.0449 (8)0.0318 (7)−0.0141 (7)0.0004 (6)0.0016 (6)
C170.0710 (10)0.0452 (9)0.0392 (8)−0.0135 (8)0.0101 (8)−0.0021 (7)
C180.1157 (19)0.0663 (13)0.0440 (10)−0.0335 (13)0.0190 (11)−0.0146 (9)
C190.1110 (18)0.0966 (17)0.0353 (9)−0.0515 (16)−0.0103 (11)−0.0013 (10)
C200.0772 (13)0.116 (2)0.0484 (11)−0.0226 (15)−0.0201 (10)0.0130 (12)
C210.0619 (10)0.0845 (14)0.0454 (10)−0.0018 (10)−0.0052 (8)0.0060 (10)
C220.0624 (10)0.0464 (10)0.0753 (13)0.0054 (8)−0.0049 (9)−0.0101 (9)
C230.0761 (13)0.0500 (11)0.1064 (19)0.0169 (10)−0.0039 (13)−0.0032 (12)
C240.0769 (14)0.0825 (17)0.109 (2)0.0233 (13)−0.0197 (15)0.0112 (16)
C250.0825 (16)0.112 (2)0.103 (2)−0.0033 (16)−0.0421 (16)0.0016 (19)
C260.0761 (13)0.0663 (13)0.0817 (14)−0.0173 (11)−0.0171 (12)−0.0039 (12)
C270.0423 (7)0.0479 (9)0.0606 (10)−0.0009 (7)0.0054 (7)−0.0082 (8)
C280.0497 (8)0.0442 (8)0.0524 (9)−0.0062 (7)0.0083 (7)−0.0017 (7)
C290.0486 (7)0.0362 (7)0.0351 (7)−0.0058 (6)0.0032 (6)−0.0021 (6)
C300.0582 (9)0.0385 (8)0.0460 (8)−0.0051 (7)0.0000 (7)0.0009 (7)
O1—N31.216 (3)C13—C141.385 (3)
O2—N31.226 (3)C14—H140.9300
O3—C301.402 (2)C15—C161.489 (2)
O3—H30.90 (3)C16—C171.381 (3)
N1—C71.3858 (18)C16—C211.385 (3)
N1—C151.308 (2)C17—C181.389 (3)
N2—C81.4009 (19)C18—H180.9300
N2—C151.3561 (19)C18—C191.367 (4)
N2—C291.4762 (19)C19—H190.9300
N3—C171.466 (3)C19—C201.355 (4)
C1—H10.9300C20—H200.9300
C1—C21.386 (3)C20—C211.393 (3)
C1—C61.388 (3)C21—H210.9300
C2—H20.9300C22—H220.9300
C2—C31.378 (4)C22—C231.384 (3)
C3—H3A0.9300C22—C271.381 (3)
C3—C41.363 (4)C23—H230.9300
C4—H40.9300C23—C241.364 (4)
C4—C51.379 (3)C24—H240.9300
C5—H50.9300C24—C251.364 (4)
C5—C61.395 (2)C25—H250.9300
C6—C71.476 (2)C25—C261.390 (4)
C7—C81.374 (2)C26—H260.9300
C8—C91.489 (2)C26—C271.379 (3)
C9—C101.389 (3)C27—C281.509 (3)
C9—C141.388 (3)C28—H28A0.9700
C10—H100.9300C28—H28B0.9700
C10—C111.391 (3)C28—C291.536 (2)
C11—H110.9300C29—H290.9800
C11—C121.365 (4)C29—C301.528 (2)
C12—H120.9300C30—H30A0.9700
C12—C131.369 (4)C30—H30B0.9700
C13—H130.9300
C30—O3—H3109.6 (17)C17—C16—C21117.09 (16)
C15—N1—C7106.24 (13)C21—C16—C15118.52 (16)
C8—N2—C29128.75 (12)C16—C17—N3120.76 (16)
C15—N2—C8106.21 (12)C16—C17—C18122.0 (2)
C15—N2—C29124.32 (12)C18—C17—N3117.27 (19)
O1—N3—O2123.0 (2)C17—C18—H18120.2
O1—N3—C17118.91 (17)C19—C18—C17119.5 (2)
O2—N3—C17118.1 (2)C19—C18—H18120.2
C2—C1—H1119.7C18—C19—H19120.0
C2—C1—C6120.5 (2)C20—C19—C18119.94 (19)
C6—C1—H1119.7C20—C19—H19120.0
C1—C2—H2119.9C19—C20—H20119.7
C3—C2—C1120.3 (2)C19—C20—C21120.6 (2)
C3—C2—H2119.9C21—C20—H20119.7
C2—C3—H3A120.1C16—C21—C20120.8 (2)
C4—C3—C2119.8 (2)C16—C21—H21119.6
C4—C3—H3A120.1C20—C21—H21119.6
C3—C4—H4119.8C23—C22—H22119.2
C3—C4—C5120.5 (2)C27—C22—H22119.2
C5—C4—H4119.8C27—C22—C23121.5 (2)
C4—C5—H5119.6C22—C23—H23119.9
C4—C5—C6120.9 (2)C24—C23—C22120.2 (2)
C6—C5—H5119.6C24—C23—H23119.9
C1—C6—C5118.00 (17)C23—C24—H24120.4
C1—C6—C7119.63 (16)C25—C24—C23119.2 (3)
C5—C6—C7122.25 (17)C25—C24—H24120.4
N1—C7—C6120.53 (14)C24—C25—H25119.6
C8—C7—N1109.25 (13)C24—C25—C26120.8 (3)
C8—C7—C6130.08 (14)C26—C25—H25119.6
N2—C8—C9124.21 (14)C25—C26—H26119.7
C7—C8—N2105.88 (12)C27—C26—C25120.6 (2)
C7—C8—C9129.81 (14)C27—C26—H26119.7
C10—C9—C8121.14 (16)C22—C27—C28122.24 (17)
C14—C9—C8120.07 (16)C26—C27—C22117.5 (2)
C14—C9—C10118.64 (17)C26—C27—C28120.17 (18)
C9—C10—H10119.9C27—C28—H28A109.0
C9—C10—C11120.1 (2)C27—C28—H28B109.0
C11—C10—H10119.9C27—C28—C29113.05 (14)
C10—C11—H11119.7H28A—C28—H28B107.8
C12—C11—C10120.5 (2)C29—C28—H28A109.0
C12—C11—H11119.7C29—C28—H28B109.0
C11—C12—H12120.1N2—C29—C28112.95 (12)
C11—C12—C13119.86 (19)N2—C29—H29106.6
C13—C12—H12120.1N2—C29—C30110.98 (12)
C12—C13—H13119.8C28—C29—H29106.6
C12—C13—C14120.5 (2)C30—C29—C28112.52 (13)
C14—C13—H13119.8C30—C29—H29106.6
C9—C14—H14119.8O3—C30—C29110.62 (14)
C13—C14—C9120.3 (2)O3—C30—H30A109.5
C13—C14—H14119.8O3—C30—H30B109.5
N1—C15—N2112.40 (13)C29—C30—H30A109.5
N1—C15—C16124.36 (13)C29—C30—H30B109.5
N2—C15—C16123.15 (13)H30A—C30—H30B108.1
C17—C16—C15124.36 (16)
O1—N3—C17—C16−28.9 (3)C10—C9—C14—C131.3 (3)
O1—N3—C17—C18149.6 (2)C10—C11—C12—C130.6 (4)
O2—N3—C17—C16151.3 (2)C11—C12—C13—C14−1.0 (4)
O2—N3—C17—C18−30.2 (3)C12—C13—C14—C90.0 (4)
N1—C7—C8—N2−1.39 (18)C14—C9—C10—C11−1.7 (3)
N1—C7—C8—C9174.96 (16)C15—N1—C7—C6−174.64 (14)
N1—C15—C16—C17−78.5 (2)C15—N1—C7—C81.39 (18)
N1—C15—C16—C2199.5 (2)C15—N2—C8—C70.87 (16)
N2—C8—C9—C10−91.6 (2)C15—N2—C8—C9−175.75 (15)
N2—C8—C9—C1492.9 (2)C15—N2—C29—C28123.81 (16)
N2—C15—C16—C17105.10 (19)C15—N2—C29—C30−108.76 (16)
N2—C15—C16—C21−76.9 (2)C15—C16—C17—N3−2.0 (2)
N2—C29—C30—O3168.26 (12)C15—C16—C17—C18179.64 (17)
N3—C17—C18—C19−178.64 (19)C15—C16—C21—C20179.7 (2)
C1—C2—C3—C40.2 (4)C16—C17—C18—C19−0.2 (3)
C1—C6—C7—N19.2 (3)C17—C16—C21—C20−2.2 (3)
C1—C6—C7—C8−165.92 (19)C17—C18—C19—C20−0.7 (3)
C2—C1—C6—C5−1.0 (3)C18—C19—C20—C210.1 (4)
C2—C1—C6—C7175.2 (2)C19—C20—C21—C161.4 (4)
C2—C3—C4—C5−0.5 (4)C21—C16—C17—N3−179.99 (17)
C3—C4—C5—C60.1 (3)C21—C16—C17—C181.6 (3)
C4—C5—C6—C10.7 (3)C22—C23—C24—C25−0.7 (5)
C4—C5—C6—C7−175.39 (17)C22—C27—C28—C2981.6 (2)
C5—C6—C7—N1−174.82 (16)C23—C22—C27—C261.9 (3)
C5—C6—C7—C810.1 (3)C23—C22—C27—C28−176.0 (2)
C6—C1—C2—C30.6 (4)C23—C24—C25—C262.3 (5)
C6—C7—C8—N2174.14 (16)C24—C25—C26—C27−1.8 (5)
C6—C7—C8—C9−9.5 (3)C25—C26—C27—C22−0.3 (4)
C7—N1—C15—N2−0.83 (18)C25—C26—C27—C28177.6 (2)
C7—N1—C15—C16−177.60 (16)C26—C27—C28—C29−96.2 (2)
C7—C8—C9—C1092.6 (2)C27—C22—C23—C24−1.4 (4)
C7—C8—C9—C14−82.8 (2)C27—C28—C29—N2−69.13 (18)
C8—N2—C15—N1−0.02 (18)C27—C28—C29—C30164.25 (14)
C8—N2—C15—C16176.79 (15)C28—C29—C30—O3−64.08 (18)
C8—N2—C29—C28−67.3 (2)C29—N2—C8—C7−169.57 (14)
C8—N2—C29—C3060.1 (2)C29—N2—C8—C913.8 (2)
C8—C9—C10—C11−177.23 (16)C29—N2—C15—N1170.96 (14)
C8—C9—C14—C13176.89 (19)C29—N2—C15—C16−12.2 (2)
C9—C10—C11—C120.8 (3)
D—H···AD—HH···AD···AD—H···A
C5—H5···Cg10.932.843.715 (2)157
C21—H21···Cg20.932.813.501 (2)132
O3—H3···N1i0.90 (3)1.89 (3)2.7935 (17)179 (3)
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 and Cg2 are the centroids of the C9–C14 and C22–C27 rings, respectively.

D—H⋯A D—HH⋯A DA D—H⋯A
C5—H5⋯Cg10.932.843.715 (2)157
C21—H21⋯Cg20.932.813.501 (2)132
O3—H3⋯N1i 0.90 (3)1.89 (3)2.7935 (17)179 (3)

Symmetry code: (i) .

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