Literature DB >> 24427022

2-[2-(5-Bromo-thio-phen-2-yl)-4,5-diphenyl-1H-imidazol-1-yl]-3-phenyl-propan-1-ol.

Jie Gao1, Liangru Yang1, Wenpeng Mai1, Jinwei Yuan1, Pu Mao1.   

Abstract

In the title compound, C28H23BrN2OS, the dihedral angles formed by the imidazole ring with the 5-bromo-thio-phenyl and phenyl rings are 76.90 (8), 34.02 (10) and 80.93 (11)°, respectively. The chiral centre maintains the S configuration of the l-phenyl-alaninol starting material. In the crystal, mol-ecules are linked by O-H⋯N hydrogen bonds, forming chains running parallel to the a-axis direction.

Entities:  

Year:  2013        PMID: 24427022      PMCID: PMC3884508          DOI: 10.1107/S1600536813021016

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of imidazole rings, see: Jiang et al. (2009 ▶); Wu et al. (2010 ▶); Eseola et al. (2010 ▶). For related compounds synthesized by our group, see: Mao et al. (2010 ▶); Yang et al. (2012 ▶); Xiao et al. (2012 ▶).

Experimental

Crystal data

C28H23BrN2OS M = 515.45 Orthorhombic, a = 9.36677 (18) Å b = 15.8434 (3) Å c = 16.1452 (3) Å V = 2395.97 (8) Å3 Z = 4 Cu Kα radiation μ = 3.33 mm−1 T = 291 K 0.3 × 0.28 × 0.26 mm

Data collection

Agilent Xcalibur (Eos, Gemini) diffractometer Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011 ▶) T min = 0.853, T max = 1.000 8866 measured reflections 4264 independent reflections 4033 reflections with I > 2σ(I) R int = 0.019

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.085 S = 1.03 4264 reflections 302 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.22 e Å−3 Δρmin = −0.44 e Å−3 Absolute structure: Flack (1983 ▶); 1834 Friedel pairs Absolute structure parameter: −0.004 (16) Data collection: CrysAlis PRO (Agilent, 2011 ▶); cell refinement: CrysAlis PRO; data reduction: CrysAlis PRO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: OLEX2 (Dolomanov et al., 2009 ▶); software used to prepare material for publication: OLEX2. Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536813021016/rz5079sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813021016/rz5079Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813021016/rz5079Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C28H23BrN2OSF(000) = 1056
Mr = 515.45Dx = 1.429 Mg m3
Orthorhombic, P212121Cu Kα radiation, λ = 1.5418 Å
Hall symbol: P 2ac 2abCell parameters from 4493 reflections
a = 9.36677 (18) Åθ = 3.9–72.3°
b = 15.8434 (3) ŵ = 3.33 mm1
c = 16.1452 (3) ÅT = 291 K
V = 2395.97 (8) Å3Block, colourless
Z = 40.3 × 0.28 × 0.26 mm
Agilent Xcalibur (Eos, Gemini) diffractometer4264 independent reflections
Radiation source: Enhance (Cu) X-ray Source4033 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.019
Detector resolution: 16.2312 pixels mm-1θmax = 67.1°, θmin = 3.9°
ω scansh = −11→7
Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2011)k = −18→18
Tmin = 0.853, Tmax = 1.000l = −19→19
8866 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.033H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.085w = 1/[σ2(Fo2) + (0.0429P)2 + 0.2535P] where P = (Fo2 + 2Fc2)/3
S = 1.03(Δ/σ)max = 0.001
4264 reflectionsΔρmax = 0.22 e Å3
302 parametersΔρmin = −0.44 e Å3
0 restraintsAbsolute structure: Flack (1983); 1834 Friedel pairs
Primary atom site location: structure-invariant direct methodsAbsolute structure parameter: −0.004 (16)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br10.26010 (5)0.97884 (3)0.26215 (3)0.08774 (14)
S10.29866 (8)0.83956 (5)0.39570 (5)0.06109 (18)
O10.5090 (3)0.60857 (15)0.42808 (18)0.0755 (7)
H10.537 (4)0.658 (3)0.428 (3)0.093 (14)*
N10.1628 (2)0.73730 (13)0.56318 (13)0.0467 (4)
N20.2202 (2)0.62572 (12)0.48784 (12)0.0422 (4)
C10.1975 (3)0.75939 (19)0.74105 (18)0.0607 (6)
H1A0.23480.80220.70820.073*
C20.1762 (4)0.7731 (2)0.8247 (2)0.0731 (9)
H20.20110.82460.84810.088*
C30.1178 (4)0.7098 (2)0.87404 (18)0.0737 (9)
H30.10260.71920.93020.088*
C40.0831 (4)0.6345 (2)0.83955 (19)0.0667 (8)
H40.04350.59230.87230.080*
C50.1059 (3)0.61977 (17)0.75615 (17)0.0561 (6)
H50.08250.56750.73370.067*
C60.1632 (3)0.68165 (16)0.70573 (15)0.0464 (5)
C70.1817 (2)0.67005 (15)0.61521 (14)0.0429 (5)
C80.2177 (2)0.59945 (14)0.57013 (14)0.0412 (5)
C90.2546 (3)0.51201 (13)0.59565 (14)0.0445 (5)
C100.3964 (3)0.48806 (18)0.6020 (2)0.0628 (7)
H100.46820.52640.58920.075*
C110.4316 (5)0.4072 (2)0.6272 (3)0.0819 (11)
H110.52690.39130.63130.098*
C120.3253 (5)0.3500 (2)0.6463 (2)0.0811 (11)
H120.34880.29590.66410.097*
C130.1856 (5)0.3734 (2)0.6388 (2)0.0772 (10)
H130.11390.33480.65120.093*
C140.1495 (3)0.45393 (19)0.61287 (19)0.0601 (7)
H140.05390.46880.60710.072*
C150.0418 (3)0.41288 (18)0.4051 (2)0.0625 (7)
H150.12580.38860.38560.075*
C16−0.0611 (4)0.3619 (2)0.4394 (2)0.0754 (9)
H16−0.04650.30400.44270.091*
C17−0.1868 (4)0.3970 (3)0.4690 (2)0.0799 (10)
H17−0.25710.36270.49190.096*
C18−0.2062 (4)0.4825 (3)0.4643 (2)0.0789 (9)
H18−0.28970.50670.48450.095*
C19−0.1017 (3)0.5331 (2)0.42947 (19)0.0636 (7)
H19−0.11620.59110.42670.076*
C200.0242 (3)0.49927 (17)0.39859 (16)0.0512 (6)
C210.1378 (3)0.55276 (18)0.35912 (15)0.0514 (6)
H21A0.09560.60560.34120.062*
H21B0.17370.52400.31040.062*
C220.2629 (3)0.57177 (13)0.41736 (14)0.0440 (5)
H220.29250.51760.44100.053*
C230.3935 (3)0.60763 (16)0.37267 (17)0.0515 (6)
H23A0.41640.57300.32500.062*
H23B0.37360.66450.35350.062*
C240.1849 (3)0.70913 (15)0.48779 (15)0.0440 (5)
C250.1707 (3)0.76397 (15)0.41474 (15)0.0479 (5)
C260.0587 (4)0.7737 (2)0.3627 (2)0.0661 (8)
H26−0.02140.73910.36390.079*
C270.0743 (4)0.8412 (2)0.3063 (2)0.0672 (8)
H270.00690.85580.26650.081*
C280.1975 (3)0.88144 (18)0.31747 (17)0.0582 (7)
U11U22U33U12U13U23
Br10.0876 (2)0.0822 (2)0.0934 (3)0.00601 (19)0.0010 (2)0.04352 (19)
S10.0579 (4)0.0608 (4)0.0646 (4)−0.0061 (3)−0.0146 (3)0.0179 (3)
O10.0605 (12)0.0598 (12)0.1062 (19)−0.0204 (10)−0.0170 (12)0.0204 (13)
N10.0503 (11)0.0417 (10)0.0482 (10)0.0091 (9)0.0002 (9)−0.0031 (8)
N20.0445 (10)0.0396 (9)0.0424 (9)0.0005 (8)−0.0027 (8)−0.0058 (7)
C10.0658 (15)0.0574 (14)0.0588 (15)0.0018 (13)0.0066 (13)−0.0128 (13)
C20.082 (2)0.0712 (19)0.0659 (18)0.0060 (17)0.0016 (16)−0.0252 (16)
C30.089 (2)0.086 (2)0.0468 (14)0.0267 (19)0.0031 (15)−0.0161 (15)
C40.081 (2)0.0697 (19)0.0492 (15)0.0164 (16)0.0028 (15)0.0049 (14)
C50.0658 (15)0.0532 (14)0.0493 (14)0.0095 (12)0.0009 (13)−0.0003 (12)
C60.0430 (12)0.0497 (13)0.0465 (12)0.0116 (10)−0.0045 (10)−0.0066 (10)
C70.0429 (11)0.0438 (11)0.0419 (11)0.0059 (10)0.0007 (9)−0.0027 (10)
C80.0394 (12)0.0403 (10)0.0438 (11)−0.0012 (9)−0.0037 (9)−0.0025 (9)
C90.0522 (12)0.0398 (10)0.0416 (10)0.0021 (10)−0.0035 (10)−0.0058 (8)
C100.0583 (16)0.0536 (15)0.0765 (18)0.0071 (13)−0.0085 (15)−0.0030 (15)
C110.085 (2)0.070 (2)0.092 (3)0.0318 (19)−0.016 (2)−0.0027 (19)
C120.135 (3)0.0417 (14)0.0667 (19)0.0170 (19)−0.007 (2)0.0008 (14)
C130.112 (3)0.0451 (15)0.074 (2)−0.0154 (17)0.003 (2)0.0015 (14)
C140.0639 (17)0.0530 (14)0.0633 (16)−0.0069 (13)0.0005 (14)−0.0037 (13)
C150.0645 (17)0.0576 (16)0.0654 (17)−0.0092 (13)−0.0040 (14)−0.0081 (14)
C160.093 (2)0.0605 (18)0.073 (2)−0.0212 (17)−0.0041 (19)0.0017 (15)
C170.075 (2)0.099 (3)0.0658 (19)−0.035 (2)−0.0058 (17)0.0093 (18)
C180.0549 (17)0.110 (3)0.0721 (19)−0.0020 (18)0.0054 (14)0.0033 (19)
C190.0636 (17)0.0641 (17)0.0633 (16)0.0032 (14)−0.0007 (14)−0.0025 (14)
C200.0532 (14)0.0564 (14)0.0441 (12)−0.0059 (11)−0.0097 (11)−0.0081 (11)
C210.0592 (15)0.0526 (14)0.0426 (12)−0.0050 (12)−0.0050 (11)−0.0059 (11)
C220.0501 (12)0.0370 (9)0.0451 (11)−0.0024 (10)0.0006 (11)−0.0057 (8)
C230.0566 (15)0.0424 (12)0.0556 (14)−0.0028 (11)0.0051 (12)−0.0070 (11)
C240.0435 (12)0.0419 (11)0.0466 (12)0.0026 (10)−0.0036 (10)−0.0005 (10)
C250.0509 (13)0.0442 (12)0.0486 (12)0.0049 (10)−0.0007 (11)−0.0029 (10)
C260.0626 (17)0.0566 (15)0.079 (2)−0.0013 (13)−0.0202 (16)0.0057 (15)
C270.0716 (19)0.0643 (17)0.0658 (18)0.0079 (16)−0.0233 (15)0.0063 (15)
C280.0672 (17)0.0532 (14)0.0544 (14)0.0103 (13)−0.0025 (13)0.0117 (12)
Br1—C281.877 (3)C12—H120.9300
S1—C251.722 (3)C12—C131.366 (6)
S1—C281.713 (3)C13—H130.9300
O1—H10.83 (4)C13—C141.385 (5)
O1—C231.404 (4)C14—H140.9300
N1—C71.368 (3)C15—H150.9300
N1—C241.313 (3)C15—C161.374 (5)
N2—C81.392 (3)C15—C201.383 (4)
N2—C221.478 (3)C16—H160.9300
N2—C241.362 (3)C16—C171.386 (6)
C1—H1A0.9300C17—H170.9300
C1—C21.383 (4)C17—C181.370 (5)
C1—C61.395 (4)C18—H180.9300
C2—H20.9300C18—C191.383 (5)
C2—C31.392 (5)C19—H190.9300
C3—H30.9300C19—C201.388 (4)
C3—C41.357 (5)C20—C211.502 (4)
C4—H40.9300C21—H21A0.9700
C4—C51.383 (4)C21—H21B0.9700
C5—H50.9300C21—C221.532 (3)
C5—C61.382 (4)C22—H220.9800
C6—C71.483 (3)C22—C231.530 (4)
C7—C81.377 (3)C23—H23A0.9700
C8—C91.486 (3)C23—H23B0.9700
C9—C101.385 (4)C24—C251.471 (3)
C9—C141.376 (4)C25—C261.352 (4)
C10—H100.9300C26—H260.9300
C10—C111.385 (4)C26—C271.412 (4)
C11—H110.9300C27—H270.9300
C11—C121.381 (6)C27—C281.331 (5)
C28—S1—C2590.92 (14)C20—C15—H15119.1
C23—O1—H1105 (3)C15—C16—H16120.0
C24—N1—C7106.5 (2)C15—C16—C17120.0 (3)
C8—N2—C22124.47 (19)C17—C16—H16120.0
C24—N2—C8106.65 (19)C16—C17—H17120.4
C24—N2—C22128.8 (2)C18—C17—C16119.3 (3)
C2—C1—H1A119.8C18—C17—H17120.4
C2—C1—C6120.3 (3)C17—C18—H18119.9
C6—C1—H1A119.8C17—C18—C19120.1 (3)
C1—C2—H2119.9C19—C18—H18119.9
C1—C2—C3120.2 (3)C18—C19—H19119.2
C3—C2—H2119.9C18—C19—C20121.6 (3)
C2—C3—H3120.2C20—C19—H19119.2
C4—C3—C2119.5 (3)C15—C20—C19117.2 (3)
C4—C3—H3120.2C15—C20—C21120.4 (3)
C3—C4—H4119.6C19—C20—C21122.5 (3)
C3—C4—C5120.7 (3)C20—C21—H21A109.0
C5—C4—H4119.6C20—C21—H21B109.0
C4—C5—H5119.6C20—C21—C22113.1 (2)
C6—C5—C4120.9 (3)H21A—C21—H21B107.8
C6—C5—H5119.6C22—C21—H21A109.0
C1—C6—C7119.0 (3)C22—C21—H21B109.0
C5—C6—C1118.4 (3)N2—C22—C21112.3 (2)
C5—C6—C7122.5 (2)N2—C22—H22106.5
N1—C7—C6119.6 (2)N2—C22—C23111.38 (19)
N1—C7—C8109.9 (2)C21—C22—H22106.5
C8—C7—C6130.6 (2)C23—C22—C21113.3 (2)
N2—C8—C9122.65 (19)C23—C22—H22106.5
C7—C8—N2105.4 (2)O1—C23—C22108.6 (2)
C7—C8—C9131.9 (2)O1—C23—H23A110.0
C10—C9—C8119.9 (2)O1—C23—H23B110.0
C14—C9—C8120.9 (2)C22—C23—H23A110.0
C14—C9—C10119.2 (3)C22—C23—H23B110.0
C9—C10—H10119.9H23A—C23—H23B108.3
C11—C10—C9120.2 (3)N1—C24—N2111.6 (2)
C11—C10—H10119.9N1—C24—C25121.9 (2)
C10—C11—H11120.0N2—C24—C25126.5 (2)
C12—C11—C10120.1 (3)C24—C25—S1119.39 (19)
C12—C11—H11120.0C26—C25—S1110.4 (2)
C11—C12—H12120.2C26—C25—C24129.5 (3)
C13—C12—C11119.5 (3)C25—C26—H26123.0
C13—C12—H12120.2C25—C26—C27114.0 (3)
C12—C13—H13119.6C27—C26—H26123.0
C12—C13—C14120.7 (3)C26—C27—H27124.3
C14—C13—H13119.6C28—C27—C26111.4 (3)
C9—C14—C13120.2 (3)C28—C27—H27124.3
C9—C14—H14119.9S1—C28—Br1119.80 (18)
C13—C14—H14119.9C27—C28—Br1126.9 (2)
C16—C15—H15119.1C27—C28—S1113.2 (2)
C16—C15—C20121.9 (3)
S1—C25—C26—C270.6 (4)C10—C11—C12—C131.0 (6)
N1—C7—C8—N2−0.1 (3)C11—C12—C13—C14−0.5 (6)
N1—C7—C8—C9177.5 (2)C12—C13—C14—C9−1.1 (5)
N1—C24—C25—S172.7 (3)C14—C9—C10—C11−1.5 (5)
N1—C24—C25—C26−96.9 (4)C15—C16—C17—C18−0.5 (5)
N2—C8—C9—C1079.5 (3)C15—C20—C21—C22−79.7 (3)
N2—C8—C9—C14−100.2 (3)C16—C15—C20—C190.9 (5)
N2—C22—C23—O162.7 (3)C16—C15—C20—C21−178.7 (3)
N2—C24—C25—S1−107.7 (3)C16—C17—C18—C190.6 (5)
N2—C24—C25—C2682.7 (4)C17—C18—C19—C200.1 (5)
C1—C2—C3—C40.6 (6)C18—C19—C20—C15−0.9 (4)
C1—C6—C7—N1−31.8 (4)C18—C19—C20—C21178.8 (3)
C1—C6—C7—C8147.7 (3)C19—C20—C21—C22100.6 (3)
C2—C1—C6—C51.0 (4)C20—C15—C16—C17−0.3 (5)
C2—C1—C6—C7177.5 (3)C20—C21—C22—N2−66.4 (3)
C2—C3—C4—C50.4 (5)C20—C21—C22—C23166.3 (2)
C3—C4—C5—C6−0.7 (5)C21—C22—C23—O1−169.6 (2)
C4—C5—C6—C10.0 (4)C22—N2—C8—C7176.0 (2)
C4—C5—C6—C7−176.4 (3)C22—N2—C8—C9−1.8 (4)
C5—C6—C7—N1144.6 (3)C22—N2—C24—N1−175.4 (2)
C5—C6—C7—C8−35.8 (4)C22—N2—C24—C255.0 (4)
C6—C1—C2—C3−1.3 (5)C24—N1—C7—C6−179.7 (2)
C6—C7—C8—N2−179.6 (2)C24—N1—C7—C80.6 (3)
C6—C7—C8—C9−2.1 (5)C24—N2—C8—C7−0.5 (3)
C7—N1—C24—N2−1.0 (3)C24—N2—C8—C9−178.3 (2)
C7—N1—C24—C25178.6 (2)C24—N2—C22—C21−71.2 (3)
C7—C8—C9—C10−97.7 (3)C24—N2—C22—C2357.1 (3)
C7—C8—C9—C1482.6 (3)C24—C25—C26—C27170.9 (3)
C8—N2—C22—C21113.1 (2)C25—S1—C28—Br1176.47 (18)
C8—N2—C22—C23−118.7 (2)C25—S1—C28—C270.2 (3)
C8—N2—C24—N11.0 (3)C25—C26—C27—C28−0.4 (4)
C8—N2—C24—C25−178.6 (2)C26—C27—C28—Br1−175.9 (2)
C8—C9—C10—C11178.8 (3)C26—C27—C28—S10.1 (4)
C8—C9—C14—C13−178.2 (3)C28—S1—C25—C24−171.9 (2)
C9—C10—C11—C12−0.1 (6)C28—S1—C25—C26−0.5 (2)
C10—C9—C14—C132.1 (4)
D—H···AD—HH···AD···AD—H···A
O1—H1···N1i0.83 (4)2.04 (4)2.838 (3)162 (4)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1—H1⋯N1i 0.83 (4)2.04 (4)2.838 (3)162 (4)

Symmetry code: (i) .

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Journal:  J Comb Chem       Date:  2010-09-08

3.  Microwave enabled umpulong mechanism based rapid and efficient four- and six-component domino formations of 2-(2'-azaaryl)imidazoles and anti-1,2-diarylethylbenzamides.

Authors:  Bo Jiang; Xiang Wang; Feng Shi; Shu-Jiang Tu; Teng Ai; Austin Ballew; Guigen Li
Journal:  J Org Chem       Date:  2009-12-18       Impact factor: 4.354

4.  2-[4,5-Diphenyl-2-(pyridin-2-yl)-1H-imidazol-1-yl]-3-phenyl-propan-1-ol.

Authors:  Liangru Yang; Yongmei Xiao; Kun He; Jinwei Yuan; Pu Mao
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-05-12

5.  2-(4,5-Diphenyl-2-p-tolyl-1H-imidazol-1-yl)-3-phenyl-propan-1-ol.

Authors:  Yongmei Xiao; Liangru Yang; Kun He; Jinwei Yuan; Pu Mao
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-01-07
  5 in total
  2 in total

1.  2-[2-(2-Nitro-phen-yl)-4,5-diphenyl-1H-imidazol-1-yl]-3-phenyl-propan-1-ol.

Authors:  Yizhen Li; Pu Mao; Yongmei Xiao; Liangru Yang; Lingbo Qu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-04-30

2.  (S)-4,5-Diphenyl-1-[1-phenyl-3-(phenyl-sulfan-yl)propan-2-yl]-2-(thio-phen-2-yl)-1H-imidazole.

Authors:  Jie Gao; Hongyan Wang; Liangru Yang; Yongmei Xiao; Pu Mao
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-11-30
  2 in total

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