Literature DB >> 24860389

(2E)-2-Benzyl-idene-N-phenyl-hydrazinecarboxamide.

S R Layana1, M Sithambaresan2, V L Siji3, M R Sudarsanakumar1, S Suma4.   

Abstract

The mol-ecule of the title compound, C14H13N3O, adopts an E conformation with respect to the azomethine C=N bond, and is roughly planar, with an r.m.s. deviation of the non-H atoms from the least-squares plane of 0.100 (2) Å and a dihedral angle between the terminal benzene rings of 5.74 (12)°. An intramolecular N-H⋯N hydrogen bond closes an S(6) ring. In the crystal, mol-ecules are linked by the pairs of N-H⋯O hydrogen bonds into centrosymmetric dimers. Dimers related by translation along [010] form slanted stacks, the shortest C⋯C inter-molecular distance within the stack being 3.283 (3) Å. Weak C-H⋯π inter-actions link the stacks into a three-dimensional structure.

Entities:  

Year:  2014        PMID: 24860389      PMCID: PMC4011198          DOI: 10.1107/S1600536814008344

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of related compounds, see: Siji et al. (2010 ▶). For biological applications of hydrazinecarboxamide and its derivatives, see: Rivadeneira et al. (2009 ▶); Shalini et al. (2009 ▶). For related structures, see: Annie et al. (2012 ▶); Aravindakshan et al. (2013 ▶).

Experimental

Crystal data

C14H13N3O M = 239.27 Monoclinic, a = 13.6308 (14) Å b = 5.4023 (5) Å c = 17.5751 (19) Å β = 93.065 (4)° V = 1292.3 (2) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 296 K 0.29 × 0.24 × 0.21 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2004 ▶) T min = 0.977, T max = 0.983 9857 measured reflections 2302 independent reflections 1655 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.146 S = 1.04 2300 reflections 171 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.19 e Å−3 Δρmin = −0.14 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶) and Mercury (Macrae et al., 2008 ▶); software used to prepare material for publication: SHELXL97 and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536814008344/yk2104sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814008344/yk2104Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814008344/yk2104Isup3.cml CCDC reference: 997059 Additional supporting information: crystallographic information; 3D view; checkCIF report
C14H13N3OF(000) = 504
Mr = 239.27Dx = 1.230 Mg m3
Monoclinic, P2/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ycCell parameters from 3449 reflections
a = 13.6308 (14) Åθ = 2.7–25.1°
b = 5.4023 (5) ŵ = 0.08 mm1
c = 17.5751 (19) ÅT = 296 K
β = 93.065 (4)°Block, colourless
V = 1292.3 (2) Å30.29 × 0.24 × 0.21 mm
Z = 4
Bruker APEXII CCD area-detector diffractometer2302 independent reflections
Radiation source: fine-focus sealed tube1655 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.023
Detector resolution: 8.33 pixels mm-1θmax = 25.1°, θmin = 2.3°
φ and ω scansh = −16→16
Absorption correction: multi-scan (SADABS; Bruker, 2004)k = −6→6
Tmin = 0.977, Tmax = 0.983l = −20→20
9857 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.146H atoms treated by a mixture of independent and constrained refinement
S = 1.04w = 1/[σ2(Fo2) + (0.0686P)2 + 0.3096P] where P = (Fo2 + 2Fc2)/3
2300 reflections(Δ/σ)max < 0.001
171 parametersΔρmax = 0.19 e Å3
2 restraintsΔρmin = −0.14 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.12555 (9)−0.4737 (3)0.03527 (9)0.0743 (4)
N1−0.03540 (11)−0.0322 (3)0.10278 (9)0.0613 (4)
N2−0.00160 (11)−0.2374 (3)0.06671 (10)0.0678 (5)
N30.15497 (11)−0.1014 (3)0.09396 (10)0.0642 (4)
C1−0.12124 (15)0.3641 (4)0.18518 (12)0.0718 (6)
H1−0.05350.34560.19240.086*
C2−0.1678 (2)0.5526 (4)0.22135 (14)0.0879 (7)
H2−0.13150.66010.25320.105*
C3−0.2675 (2)0.5831 (5)0.21077 (16)0.0924 (8)
H3−0.29890.71080.23530.111*
C4−0.32004 (18)0.4260 (5)0.16432 (16)0.0885 (7)
H4−0.38750.44740.15670.106*
C5−0.27437 (14)0.2354 (4)0.12843 (12)0.0735 (6)
H5−0.31140.12780.09720.088*
C6−0.17410 (13)0.2018 (3)0.13822 (10)0.0585 (5)
C7−0.12822 (13)−0.0028 (4)0.09942 (11)0.0605 (5)
H7−0.1677−0.11450.07150.073*
C80.09629 (13)−0.2821 (4)0.06361 (11)0.0596 (5)
C90.25809 (13)−0.0996 (3)0.10287 (11)0.0593 (5)
C100.29986 (15)0.0908 (4)0.14580 (15)0.0811 (7)
H100.26010.21150.16590.097*
C110.40000 (17)0.1028 (5)0.15888 (18)0.0985 (8)
H110.42750.23000.18860.118*
C120.45930 (17)−0.0700 (5)0.12867 (19)0.1017 (9)
H120.5271−0.05980.13700.122*
C130.41822 (16)−0.2588 (5)0.08601 (17)0.0977 (8)
H130.4587−0.37680.06530.117*
C140.31741 (14)−0.2772 (4)0.07315 (13)0.0773 (6)
H140.2901−0.40790.04480.093*
H2'−0.0434 (12)−0.336 (3)0.0420 (11)0.075 (6)*
H3'0.1243 (14)0.026 (3)0.1121 (12)0.078 (7)*
U11U22U33U12U13U23
O10.0593 (8)0.0682 (9)0.0949 (11)0.0025 (6)−0.0021 (7)−0.0228 (7)
N10.0535 (9)0.0662 (10)0.0646 (10)−0.0012 (7)0.0064 (7)−0.0066 (7)
N20.0501 (9)0.0714 (11)0.0820 (11)−0.0038 (8)0.0036 (8)−0.0216 (9)
N30.0520 (9)0.0623 (10)0.0776 (11)0.0030 (7)−0.0022 (7)−0.0141 (8)
C10.0687 (12)0.0747 (14)0.0718 (13)0.0010 (10)0.0009 (10)−0.0056 (10)
C20.112 (2)0.0756 (15)0.0759 (15)−0.0007 (13)0.0062 (13)−0.0110 (12)
C30.112 (2)0.0763 (15)0.0919 (18)0.0256 (14)0.0291 (15)0.0068 (13)
C40.0737 (14)0.0932 (17)0.0995 (18)0.0234 (13)0.0137 (13)0.0107 (14)
C50.0582 (11)0.0841 (15)0.0783 (14)0.0038 (10)0.0046 (10)0.0023 (11)
C60.0564 (10)0.0630 (11)0.0566 (11)−0.0001 (8)0.0072 (8)0.0048 (9)
C70.0528 (10)0.0684 (12)0.0603 (11)−0.0057 (8)0.0018 (8)−0.0053 (9)
C80.0532 (10)0.0630 (11)0.0623 (11)−0.0005 (9)0.0009 (8)−0.0040 (9)
C90.0517 (10)0.0605 (11)0.0651 (11)0.0007 (8)−0.0017 (8)0.0039 (9)
C100.0625 (12)0.0685 (13)0.1114 (18)−0.0038 (10)−0.0036 (11)−0.0131 (12)
C110.0678 (14)0.0837 (16)0.142 (2)−0.0114 (12)−0.0128 (14)−0.0153 (15)
C120.0534 (12)0.0997 (19)0.151 (3)−0.0060 (13)−0.0056 (14)−0.0021 (17)
C130.0603 (13)0.1020 (19)0.131 (2)0.0146 (13)0.0054 (13)−0.0146 (16)
C140.0589 (11)0.0817 (14)0.0909 (15)0.0045 (10)0.0001 (10)−0.0161 (12)
O1—C81.225 (2)C4—H40.9300
N1—C71.273 (2)C5—C61.380 (3)
N1—N21.369 (2)C5—H50.9300
N2—C81.360 (2)C6—C71.457 (3)
N2—H2'0.877 (9)C7—H70.9300
N3—C81.353 (2)C9—C141.376 (3)
N3—C91.406 (2)C9—C101.380 (3)
N3—H3'0.876 (9)C10—C111.373 (3)
C1—C21.374 (3)C10—H100.9300
C1—C61.380 (3)C11—C121.361 (4)
C1—H10.9300C11—H110.9300
C2—C31.373 (4)C12—C131.368 (4)
C2—H20.9300C12—H120.9300
C3—C41.355 (4)C13—C141.384 (3)
C3—H30.9300C13—H130.9300
C4—C51.374 (3)C14—H140.9300
C7—N1—N2115.97 (15)N1—C7—C6121.55 (17)
C8—N2—N1121.18 (15)N1—C7—H7119.2
C8—N2—H2'119.0 (13)C6—C7—H7119.2
N1—N2—H2'119.7 (13)O1—C8—N3124.84 (16)
C8—N3—C9127.98 (16)O1—C8—N2120.54 (16)
C8—N3—H3'115.4 (14)N3—C8—N2114.62 (17)
C9—N3—H3'116.6 (14)C14—C9—C10119.58 (18)
C2—C1—C6120.6 (2)C14—C9—N3123.85 (17)
C2—C1—H1119.7C10—C9—N3116.54 (17)
C6—C1—H1119.7C11—C10—C9120.2 (2)
C3—C2—C1120.3 (2)C11—C10—H10119.9
C3—C2—H2119.8C9—C10—H10119.9
C1—C2—H2119.8C12—C11—C10120.5 (2)
C4—C3—C2119.6 (2)C12—C11—H11119.7
C4—C3—H3120.2C10—C11—H11119.7
C2—C3—H3120.2C11—C12—C13119.4 (2)
C3—C4—C5120.6 (2)C11—C12—H12120.3
C3—C4—H4119.7C13—C12—H12120.3
C5—C4—H4119.7C12—C13—C14121.1 (2)
C4—C5—C6120.7 (2)C12—C13—H13119.4
C4—C5—H5119.6C14—C13—H13119.4
C6—C5—H5119.6C9—C14—C13119.1 (2)
C1—C6—C5118.23 (19)C9—C14—H14120.4
C1—C6—C7122.55 (17)C13—C14—H14120.4
C5—C6—C7119.22 (18)
C7—N1—N2—C8177.05 (17)C9—N3—C8—N2176.29 (18)
C6—C1—C2—C3−0.5 (3)N1—N2—C8—O1175.52 (17)
C1—C2—C3—C4−0.1 (4)N1—N2—C8—N3−4.3 (3)
C2—C3—C4—C50.7 (4)C8—N3—C9—C147.8 (3)
C3—C4—C5—C6−0.8 (3)C8—N3—C9—C10−170.6 (2)
C2—C1—C6—C50.4 (3)C14—C9—C10—C11−0.1 (4)
C2—C1—C6—C7−179.21 (19)N3—C9—C10—C11178.4 (2)
C4—C5—C6—C10.2 (3)C9—C10—C11—C121.2 (4)
C4—C5—C6—C7179.83 (18)C10—C11—C12—C13−1.1 (5)
N2—N1—C7—C6177.24 (16)C11—C12—C13—C14−0.1 (4)
C1—C6—C7—N1−4.9 (3)C10—C9—C14—C13−1.0 (3)
C5—C6—C7—N1175.51 (18)N3—C9—C14—C13−179.4 (2)
C9—N3—C8—O1−3.5 (3)C12—C13—C14—C91.1 (4)
D—H···AD—HH···AD···AD—H···A
N3—H3′···N10.88 (1)2.20 (2)2.634 (2)110 (2)
N2—H2′···O1i0.88 (1)2.00 (1)2.860 (2)167 (2)
C3—H3···Cg1ii0.932.993.800 (3)146
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the C9–C14 ring.

D—H⋯A D—HH⋯A DA D—H⋯A
N3—H3′⋯N10.88 (1)2.20 (2)2.634 (2)110 (2)
N2—H2′⋯O1i 0.88 (1)2.00 (1)2.860 (2)167 (2)
C3—H3⋯Cg1ii 0.932.993.800 (3)146

Symmetry codes: (i) ; (ii) .

  6 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis, characterization and physiochemical information, along with antimicrobial studies of some metal complexes derived from an ON donor semicarbazone ligand.

Authors:  V L Siji; M R Sudarsana Kumar; S Suma; M R Prathapachandra Kurup
Journal:  Spectrochim Acta A Mol Biomol Spectrosc       Date:  2010-03-06       Impact factor: 4.098

3.  Cyclization of the semicarbazone template of aryl semicarbazones: synthesis and anticonvulsant activity of 4,5-diphenyl-2H-1,2,4-triazol-3(4H)-one.

Authors:  M Shalini; P Yogeeswari; D Sriram; J P Stables
Journal:  Biomed Pharmacother       Date:  2009-03       Impact factor: 6.529

4.  Biological effects of a complex of vanadium(V) with salicylaldehyde semicarbazone in osteoblasts in culture: mechanism of action.

Authors:  Josefina Rivadeneira; Daniel A Barrio; Gabriel Arrambide; Dinorah Gambino; Liliana Bruzzone; Susana B Etcheverry
Journal:  J Inorg Biochem       Date:  2008-11-28       Impact factor: 4.155

5.  (2E)-2-[1-(2-Hy-droxy-4-meth-oxy-phenyl)ethyl-idene]-N-phenyl-hydrazine-carbox-amide monohydrate.

Authors:  C F Annie; Jinsa Mary Jacob; M Sithambaresan; M R Prathapachandra Kurup
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-09-22

6.  (2E)-2-(3-Eth-oxy-2-hy-droxy-benzyl-idene)hydrazinecarboxamide.

Authors:  A Ambili Aravindakshan; M Sithambaresan; M R Prathapachandra Kurup
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-03-23
  6 in total
  1 in total

1.  (2E,7E)-2,7-Bis[(thio-phen-2-yl)methyl-idene]cyclo-hepta-none.

Authors:  C Nithya; M Sithambaresan; S Prathapan; M R Prathapachandra Kurup
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-05-31
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.