| Literature DB >> 23125761 |
C F Annie1, Jinsa Mary Jacob, M Sithambaresan, M R Prathapachandra Kurup.
Abstract
The title compound, C(16)H(17)N(3)O(3)·H(2)O, exists in the E conformation with respect to the azomethine C=N double bond. While the phenyl ring is almost coplanar with the central hydrazinecarboxamide group [dihedral angle = 14.18 (11)°], it is twisted slightly with respect to the other aromatic ring in the mol-ecule, with a dihedral angle of 22.88 (13)°. The packing is dominated by O-H⋯O, N-H⋯O and C-H⋯O hydrogen-bond inter-actions, forming a three-dimensional supra-molecular structure which is augmented by two types of C-H⋯π inter-actions. An intramolecular O-H⋯N interaction is also present in the molecule.Entities:
Year: 2012 PMID: 23125761 PMCID: PMC3470348 DOI: 10.1107/S1600536812039414
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H17N3O3·H2O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 2335 reflections |
| θ = 2.6–28.5° | |
| µ = 0.10 mm−1 | |
| β = 96.813 (7)° | Block, light yellow |
| 0.50 × 0.30 × 0.25 mm | |
| Bruker Kappa APEXII CCD diffractometer | 2809 independent reflections |
| Radiation source: fine-focus sealed tube | 1807 reflections with |
| Graphite monochromator | |
| Detector resolution: 8.33 pixels mm-1 | θmax = 25.0°, θmin = 2.6° |
| ω and φ scans | |
| Absorption correction: multi-scan ( | |
| 12097 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2809 reflections | (Δ/σ)max = 0.002 |
| 230 parameters | Δρmax = 0.22 e Å−3 |
| 6 restraints | Δρmin = −0.19 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.00919 (16) | 0.45528 (15) | 0.7326 (2) | 0.0873 (6) | |
| O2 | 0.28586 (14) | 0.46101 (12) | 0.42646 (18) | 0.0649 (5) | |
| O3 | 0.48111 (13) | 0.39835 (12) | 0.18956 (17) | 0.0673 (5) | |
| O1S | 0.46607 (17) | 0.43758 (13) | 0.6547 (2) | 0.0782 (6) | |
| N1 | 0.34225 (14) | 0.30092 (14) | 0.32720 (19) | 0.0550 (5) | |
| N2 | 0.41511 (16) | 0.25435 (15) | 0.2542 (2) | 0.0579 (5) | |
| N3 | 0.55055 (16) | 0.25697 (15) | 0.1149 (2) | 0.0595 (5) | |
| C1 | 0.1243 (2) | 0.26313 (19) | 0.5438 (3) | 0.0665 (7) | |
| H1 | 0.1149 | 0.1964 | 0.5341 | 0.080* | |
| C2 | 0.0592 (2) | 0.3136 (2) | 0.6243 (3) | 0.0721 (7) | |
| H2 | 0.0057 | 0.2814 | 0.6674 | 0.087* | |
| C3 | 0.07267 (18) | 0.41231 (19) | 0.6422 (3) | 0.0632 (6) | |
| C4 | 0.14813 (18) | 0.46014 (18) | 0.5735 (2) | 0.0605 (6) | |
| H4 | 0.1560 | 0.5270 | 0.5831 | 0.073* | |
| C5 | 0.21263 (16) | 0.40877 (17) | 0.4898 (2) | 0.0525 (6) | |
| C6 | 0.20481 (17) | 0.30831 (17) | 0.4753 (2) | 0.0527 (6) | |
| C7 | 0.27824 (18) | 0.25124 (17) | 0.3976 (2) | 0.0549 (6) | |
| C8 | 0.2817 (2) | 0.14371 (19) | 0.4067 (3) | 0.0725 (7) | |
| H8A | 0.2911 | 0.1172 | 0.3145 | 0.109* | |
| H8B | 0.2149 | 0.1202 | 0.4363 | 0.109* | |
| H8C | 0.3413 | 0.1242 | 0.4754 | 0.109* | |
| C9 | 0.48365 (17) | 0.31043 (17) | 0.1865 (2) | 0.0528 (5) | |
| C10 | 0.63021 (18) | 0.29082 (16) | 0.0333 (2) | 0.0544 (6) | |
| C11 | 0.6348 (2) | 0.38417 (19) | −0.0166 (3) | 0.0703 (7) | |
| H11 | 0.5839 | 0.4297 | 0.0053 | 0.084* | |
| C12 | 0.7142 (2) | 0.4102 (2) | −0.0987 (3) | 0.0797 (8) | |
| H12 | 0.7167 | 0.4735 | −0.1323 | 0.096* | |
| C13 | 0.7897 (2) | 0.3447 (2) | −0.1319 (3) | 0.0858 (9) | |
| H13 | 0.8439 | 0.3628 | −0.1870 | 0.103* | |
| C14 | 0.7843 (3) | 0.2526 (3) | −0.0828 (4) | 0.0974 (11) | |
| H14 | 0.8355 | 0.2074 | −0.1046 | 0.117* | |
| C15 | 0.7047 (2) | 0.2249 (2) | −0.0017 (3) | 0.0787 (8) | |
| H15 | 0.7016 | 0.1611 | 0.0295 | 0.094* | |
| C16 | 0.0259 (3) | 0.5537 (2) | 0.7664 (3) | 0.0955 (10) | |
| H16A | 0.1001 | 0.5636 | 0.8055 | 0.143* | |
| H16B | −0.0211 | 0.5728 | 0.8357 | 0.143* | |
| H16C | 0.0100 | 0.5920 | 0.6812 | 0.143* | |
| H1A | 0.424 (3) | 0.459 (3) | 0.583 (3) | 0.141 (16)* | |
| H1B | 0.486 (3) | 0.4887 (17) | 0.698 (3) | 0.109 (12)* | |
| H3 | 0.548 (2) | 0.1938 (8) | 0.126 (3) | 0.089 (9)* | |
| H2' | 0.318 (2) | 0.4169 (16) | 0.378 (3) | 0.094 (10)* | |
| H2N | 0.4174 (19) | 0.1907 (8) | 0.245 (2) | 0.063 (7)* |
| O1 | 0.0817 (13) | 0.0877 (15) | 0.1018 (14) | 0.0039 (10) | 0.0499 (10) | 0.0000 (11) |
| O2 | 0.0673 (11) | 0.0548 (11) | 0.0776 (11) | −0.0040 (8) | 0.0296 (8) | 0.0036 (8) |
| O3 | 0.0756 (11) | 0.0487 (10) | 0.0802 (12) | 0.0015 (8) | 0.0203 (8) | −0.0082 (8) |
| O1S | 0.0866 (13) | 0.0528 (11) | 0.0914 (14) | −0.0062 (10) | −0.0048 (11) | −0.0055 (10) |
| N1 | 0.0542 (11) | 0.0577 (13) | 0.0540 (11) | 0.0038 (9) | 0.0097 (8) | −0.0022 (8) |
| N2 | 0.0619 (12) | 0.0503 (13) | 0.0637 (12) | 0.0046 (9) | 0.0178 (9) | −0.0037 (9) |
| N3 | 0.0641 (12) | 0.0469 (12) | 0.0710 (13) | 0.0047 (9) | 0.0225 (10) | −0.0005 (9) |
| C1 | 0.0627 (15) | 0.0601 (16) | 0.0788 (17) | −0.0095 (12) | 0.0176 (13) | 0.0023 (12) |
| C2 | 0.0637 (15) | 0.0726 (19) | 0.0847 (18) | −0.0111 (13) | 0.0283 (13) | 0.0069 (14) |
| C3 | 0.0536 (14) | 0.0717 (18) | 0.0668 (15) | 0.0032 (12) | 0.0176 (11) | 0.0055 (12) |
| C4 | 0.0558 (13) | 0.0601 (15) | 0.0673 (15) | 0.0026 (11) | 0.0138 (11) | 0.0012 (11) |
| C5 | 0.0459 (12) | 0.0585 (15) | 0.0536 (13) | −0.0029 (10) | 0.0077 (9) | 0.0074 (10) |
| C6 | 0.0494 (12) | 0.0576 (15) | 0.0505 (12) | −0.0026 (10) | 0.0037 (9) | 0.0044 (10) |
| C7 | 0.0519 (13) | 0.0595 (15) | 0.0518 (13) | −0.0010 (10) | −0.0001 (10) | 0.0014 (10) |
| C8 | 0.0812 (18) | 0.0603 (16) | 0.0766 (17) | −0.0002 (13) | 0.0116 (13) | −0.0021 (12) |
| C9 | 0.0521 (13) | 0.0493 (14) | 0.0560 (14) | 0.0013 (10) | 0.0023 (10) | −0.0033 (10) |
| C10 | 0.0536 (13) | 0.0552 (15) | 0.0548 (13) | 0.0017 (10) | 0.0076 (10) | −0.0023 (10) |
| C11 | 0.0765 (17) | 0.0573 (16) | 0.0808 (17) | 0.0057 (13) | 0.0251 (13) | 0.0006 (13) |
| C12 | 0.097 (2) | 0.0648 (18) | 0.0831 (19) | −0.0106 (15) | 0.0328 (15) | 0.0019 (13) |
| C13 | 0.0797 (19) | 0.095 (2) | 0.089 (2) | −0.0092 (16) | 0.0368 (15) | −0.0005 (17) |
| C14 | 0.093 (2) | 0.089 (2) | 0.120 (3) | 0.0294 (17) | 0.0550 (19) | 0.0167 (18) |
| C15 | 0.0864 (19) | 0.0643 (18) | 0.091 (2) | 0.0191 (14) | 0.0335 (15) | 0.0115 (14) |
| C16 | 0.100 (2) | 0.091 (3) | 0.103 (2) | 0.0114 (18) | 0.0410 (18) | −0.0163 (18) |
| O1—C3 | 1.360 (3) | C4—H4 | 0.9300 |
| O1—C16 | 1.403 (3) | C5—C6 | 1.393 (3) |
| O2—C5 | 1.351 (3) | C6—C7 | 1.462 (3) |
| O2—H2' | 0.881 (10) | C7—C8 | 1.485 (3) |
| O3—C9 | 1.212 (3) | C8—H8A | 0.9600 |
| O1S—H1A | 0.857 (18) | C8—H8B | 0.9600 |
| O1S—H1B | 0.837 (18) | C8—H8C | 0.9600 |
| N1—C7 | 1.289 (3) | C10—C15 | 1.363 (3) |
| N1—N2 | 1.358 (3) | C10—C11 | 1.373 (3) |
| N2—C9 | 1.361 (3) | C11—C12 | 1.368 (3) |
| N2—H2N | 0.882 (10) | C11—H11 | 0.9300 |
| N3—C9 | 1.348 (3) | C12—C13 | 1.363 (4) |
| N3—C10 | 1.400 (3) | C12—H12 | 0.9300 |
| N3—H3 | 0.878 (10) | C13—C14 | 1.354 (4) |
| C1—C2 | 1.360 (4) | C13—H13 | 0.9300 |
| C1—C6 | 1.397 (3) | C14—C15 | 1.370 (4) |
| C1—H1 | 0.9300 | C14—H14 | 0.9300 |
| C2—C3 | 1.379 (4) | C15—H15 | 0.9300 |
| C2—H2 | 0.9300 | C16—H16A | 0.9600 |
| C3—C4 | 1.368 (3) | C16—H16B | 0.9600 |
| C4—C5 | 1.381 (3) | C16—H16C | 0.9600 |
| C3—O1—C16 | 118.8 (2) | C7—C8—H8B | 109.5 |
| C5—O2—H2' | 103 (2) | H8A—C8—H8B | 109.5 |
| H1A—O1S—H1B | 102 (3) | C7—C8—H8C | 109.5 |
| C7—N1—N2 | 119.7 (2) | H8A—C8—H8C | 109.5 |
| N1—N2—C9 | 117.21 (19) | H8B—C8—H8C | 109.5 |
| N1—N2—H2N | 123.3 (16) | O3—C9—N3 | 125.3 (2) |
| C9—N2—H2N | 119.4 (16) | O3—C9—N2 | 122.5 (2) |
| C9—N3—C10 | 127.4 (2) | N3—C9—N2 | 112.2 (2) |
| C9—N3—H3 | 117 (2) | C15—C10—C11 | 119.0 (2) |
| C10—N3—H3 | 115 (2) | C15—C10—N3 | 116.9 (2) |
| C2—C1—C6 | 122.1 (2) | C11—C10—N3 | 124.0 (2) |
| C2—C1—H1 | 118.9 | C12—C11—C10 | 120.0 (2) |
| C6—C1—H1 | 118.9 | C12—C11—H11 | 120.0 |
| C1—C2—C3 | 120.0 (2) | C10—C11—H11 | 120.0 |
| C1—C2—H2 | 120.0 | C13—C12—C11 | 121.0 (3) |
| C3—C2—H2 | 120.0 | C13—C12—H12 | 119.5 |
| O1—C3—C4 | 124.3 (2) | C11—C12—H12 | 119.5 |
| O1—C3—C2 | 115.8 (2) | C14—C13—C12 | 118.6 (3) |
| C4—C3—C2 | 119.9 (2) | C14—C13—H13 | 120.7 |
| C3—C4—C5 | 119.8 (2) | C12—C13—H13 | 120.7 |
| C3—C4—H4 | 120.1 | C13—C14—C15 | 121.2 (3) |
| C5—C4—H4 | 120.1 | C13—C14—H14 | 119.4 |
| O2—C5—C4 | 116.3 (2) | C15—C14—H14 | 119.4 |
| O2—C5—C6 | 121.9 (2) | C10—C15—C14 | 120.1 (3) |
| C4—C5—C6 | 121.8 (2) | C10—C15—H15 | 119.9 |
| C5—C6—C1 | 116.3 (2) | C14—C15—H15 | 119.9 |
| C5—C6—C7 | 122.9 (2) | O1—C16—H16A | 109.5 |
| C1—C6—C7 | 120.8 (2) | O1—C16—H16B | 109.5 |
| N1—C7—C6 | 115.4 (2) | H16A—C16—H16B | 109.5 |
| N1—C7—C8 | 123.0 (2) | O1—C16—H16C | 109.5 |
| C6—C7—C8 | 121.6 (2) | H16A—C16—H16C | 109.5 |
| C7—C8—H8A | 109.5 | H16B—C16—H16C | 109.5 |
| C7—N1—N2—C9 | −177.41 (18) | C5—C6—C7—N1 | −8.6 (3) |
| C6—C1—C2—C3 | −1.0 (4) | C1—C6—C7—N1 | 173.59 (19) |
| C16—O1—C3—C4 | −4.5 (4) | C5—C6—C7—C8 | 168.3 (2) |
| C16—O1—C3—C2 | 174.0 (2) | C1—C6—C7—C8 | −9.5 (3) |
| C1—C2—C3—O1 | −175.5 (2) | C10—N3—C9—O3 | 1.1 (4) |
| C1—C2—C3—C4 | 3.0 (4) | C10—N3—C9—N2 | 179.5 (2) |
| O1—C3—C4—C5 | 176.5 (2) | N1—N2—C9—O3 | −0.1 (3) |
| C2—C3—C4—C5 | −1.8 (4) | N1—N2—C9—N3 | −178.56 (18) |
| C3—C4—C5—O2 | −179.4 (2) | C9—N3—C10—C15 | 165.1 (2) |
| C3—C4—C5—C6 | −1.4 (3) | C9—N3—C10—C11 | −17.3 (4) |
| O2—C5—C6—C1 | −178.8 (2) | C15—C10—C11—C12 | −0.8 (4) |
| C4—C5—C6—C1 | 3.3 (3) | N3—C10—C11—C12 | −178.4 (2) |
| O2—C5—C6—C7 | 3.4 (3) | C10—C11—C12—C13 | −0.2 (4) |
| C4—C5—C6—C7 | −174.6 (2) | C11—C12—C13—C14 | 0.5 (5) |
| C2—C1—C6—C5 | −2.1 (3) | C12—C13—C14—C15 | 0.1 (5) |
| C2—C1—C6—C7 | 175.8 (2) | C11—C10—C15—C14 | 1.5 (4) |
| N2—N1—C7—C6 | 178.56 (17) | N3—C10—C15—C14 | 179.2 (3) |
| N2—N1—C7—C8 | 1.7 (3) | C13—C14—C15—C10 | −1.2 (5) |
| H··· | ||||
| O2—H2′···N1 | 0.88 (1) | 1.71 (2) | 2.526 (2) | 154 (3) |
| N2—H2 | 0.88 (1) | 2.08 (1) | 2.900 (3) | 154 (2) |
| N3—H3···O1 | 0.88 (1) | 2.11 (2) | 2.918 (3) | 153 (3) |
| O1 | 0.86 (2) | 2.12 (2) | 2.925 (3) | 156 (3) |
| O1 | 0.84 (2) | 1.90 (2) | 2.730 (3) | 174 (3) |
| C8—H8 | 0.96 | 2.51 | 3.457 (3) | 167 |
| C11—H11···O3 | 0.93 | 2.31 | 2.881 (3) | 119 |
| C13—H13···O1iv | 0.93 | 2.60 | 3.489 (3) | 160 |
| C8—H8 | 0.96 | 2.92 | 3.543 (3) | 123 |
| C16—H16 | 0.96 | 2.79 | 3.645 (4) | 148 |
Hydrogen-bond geometry (Å, °)
Cg1 is the centroid of the C1–C6 ring.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O2—H2′⋯N1 | 0.88 (1) | 1.71 (2) | 2.526 (2) | 154 (3) |
| N2—H2N⋯O1 | 0.88 (1) | 2.08 (1) | 2.900 (3) | 154 (2) |
| N3—H3⋯O1 | 0.88 (1) | 2.11 (2) | 2.918 (3) | 153 (3) |
| O1 | 0.86 (2) | 2.12 (2) | 2.925 (3) | 156 (3) |
| O1 | 0.84 (2) | 1.90 (2) | 2.730 (3) | 174 (3) |
| C8—H8 | 0.96 | 2.51 | 3.457 (3) | 167 |
| C11—H11⋯O3 | 0.93 | 2.31 | 2.881 (3) | 119 |
| C13—H13⋯O1iv | 0.93 | 2.60 | 3.489 (3) | 160 |
| C8—H8 | 0.96 | 2.92 | 3.543 (3) | 123 |
| C16—H16 | 0.96 | 2.79 | 3.645 (4) | 148 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .