Literature DB >> 23125761

(2E)-2-[1-(2-Hy-droxy-4-meth-oxy-phenyl)ethyl-idene]-N-phenyl-hydrazine-carbox-amide monohydrate.

C F Annie1, Jinsa Mary Jacob, M Sithambaresan, M R Prathapachandra Kurup.   

Abstract

The title compound, C(16)H(17)N(3)O(3)·H(2)O, exists in the E conformation with respect to the azomethine C=N double bond. While the phenyl ring is almost coplanar with the central hydrazinecarboxamide group [dihedral angle = 14.18 (11)°], it is twisted slightly with respect to the other aromatic ring in the mol-ecule, with a dihedral angle of 22.88 (13)°. The packing is dominated by O-H⋯O, N-H⋯O and C-H⋯O hydrogen-bond inter-actions, forming a three-dimensional supra-molecular structure which is augmented by two types of C-H⋯π inter-actions. An intramolecular O-H⋯N interaction is also present in the molecule.

Entities:  

Year:  2012        PMID: 23125761      PMCID: PMC3470348          DOI: 10.1107/S1600536812039414

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the application of hydrazinecarboxamides as enzyme inhibitors and as a source of self-complementary bidirectional hydrogen-bonding motifs, see: Lam et al. (1994 ▶); Chorev & Goodman (1993 ▶); Zhao et al. (1990 ▶). For the synthesis of related compounds, see: Sreekanth et al. (2004 ▶). For standard bond-length data, see: Allen et al. (1987 ▶). For related structures, see: Sithambaresan & Kurup (2011 ▶); Siji et al. (2010 ▶).

Experimental

Crystal data

C16H17N3O3·H2O M = 317.34 Monoclinic, a = 12.4020 (18) Å b = 13.7808 (19) Å c = 9.3919 (10) Å β = 96.813 (7)° V = 1593.8 (4) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 296 K 0.50 × 0.30 × 0.25 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS (Bruker, 2004 ▶) T min = 0.966, T max = 0.976 12097 measured reflections 2809 independent reflections 1807 reflections with I > 2σ(I) R int = 0.083

Refinement

R[F 2 > 2σ(F 2)] = 0.053 wR(F 2) = 0.172 S = 1.02 2809 reflections 230 parameters 6 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.22 e Å−3 Δρmin = −0.19 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: APEX2 and SAINT (Bruker, 2004 ▶); data reduction: SAINT and XPREP (Bruker, 2004 ▶); program(s) used to solve structure: SHELXL97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 2010 ▶); software used to prepare material for publication: SHELXL97 and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S1600536812039414/bv2210sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812039414/bv2210Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812039414/bv2210Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H17N3O3·H2OF(000) = 672
Mr = 317.34Dx = 1.322 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 2335 reflections
a = 12.4020 (18) Åθ = 2.6–28.5°
b = 13.7808 (19) ŵ = 0.10 mm1
c = 9.3919 (10) ÅT = 296 K
β = 96.813 (7)°Block, light yellow
V = 1593.8 (4) Å30.50 × 0.30 × 0.25 mm
Z = 4
Bruker Kappa APEXII CCD diffractometer2809 independent reflections
Radiation source: fine-focus sealed tube1807 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.083
Detector resolution: 8.33 pixels mm-1θmax = 25.0°, θmin = 2.6°
ω and φ scansh = −14→14
Absorption correction: multi-scan (SADABS (Bruker, 2004)k = −15→16
Tmin = 0.966, Tmax = 0.976l = −11→11
12097 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.053Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.172H atoms treated by a mixture of independent and constrained refinement
S = 1.02w = 1/[σ2(Fo2) + (0.0711P)2 + 0.2072P] where P = (Fo2 + 2Fc2)/3
2809 reflections(Δ/σ)max = 0.002
230 parametersΔρmax = 0.22 e Å3
6 restraintsΔρmin = −0.19 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.00919 (16)0.45528 (15)0.7326 (2)0.0873 (6)
O20.28586 (14)0.46101 (12)0.42646 (18)0.0649 (5)
O30.48111 (13)0.39835 (12)0.18956 (17)0.0673 (5)
O1S0.46607 (17)0.43758 (13)0.6547 (2)0.0782 (6)
N10.34225 (14)0.30092 (14)0.32720 (19)0.0550 (5)
N20.41511 (16)0.25435 (15)0.2542 (2)0.0579 (5)
N30.55055 (16)0.25697 (15)0.1149 (2)0.0595 (5)
C10.1243 (2)0.26313 (19)0.5438 (3)0.0665 (7)
H10.11490.19640.53410.080*
C20.0592 (2)0.3136 (2)0.6243 (3)0.0721 (7)
H20.00570.28140.66740.087*
C30.07267 (18)0.41231 (19)0.6422 (3)0.0632 (6)
C40.14813 (18)0.46014 (18)0.5735 (2)0.0605 (6)
H40.15600.52700.58310.073*
C50.21263 (16)0.40877 (17)0.4898 (2)0.0525 (6)
C60.20481 (17)0.30831 (17)0.4753 (2)0.0527 (6)
C70.27824 (18)0.25124 (17)0.3976 (2)0.0549 (6)
C80.2817 (2)0.14371 (19)0.4067 (3)0.0725 (7)
H8A0.29110.11720.31450.109*
H8B0.21490.12020.43630.109*
H8C0.34130.12420.47540.109*
C90.48365 (17)0.31043 (17)0.1865 (2)0.0528 (5)
C100.63021 (18)0.29082 (16)0.0333 (2)0.0544 (6)
C110.6348 (2)0.38417 (19)−0.0166 (3)0.0703 (7)
H110.58390.42970.00530.084*
C120.7142 (2)0.4102 (2)−0.0987 (3)0.0797 (8)
H120.71670.4735−0.13230.096*
C130.7897 (2)0.3447 (2)−0.1319 (3)0.0858 (9)
H130.84390.3628−0.18700.103*
C140.7843 (3)0.2526 (3)−0.0828 (4)0.0974 (11)
H140.83550.2074−0.10460.117*
C150.7047 (2)0.2249 (2)−0.0017 (3)0.0787 (8)
H150.70160.16110.02950.094*
C160.0259 (3)0.5537 (2)0.7664 (3)0.0955 (10)
H16A0.10010.56360.80550.143*
H16B−0.02110.57280.83570.143*
H16C0.01000.59200.68120.143*
H1A0.424 (3)0.459 (3)0.583 (3)0.141 (16)*
H1B0.486 (3)0.4887 (17)0.698 (3)0.109 (12)*
H30.548 (2)0.1938 (8)0.126 (3)0.089 (9)*
H2'0.318 (2)0.4169 (16)0.378 (3)0.094 (10)*
H2N0.4174 (19)0.1907 (8)0.245 (2)0.063 (7)*
U11U22U33U12U13U23
O10.0817 (13)0.0877 (15)0.1018 (14)0.0039 (10)0.0499 (10)0.0000 (11)
O20.0673 (11)0.0548 (11)0.0776 (11)−0.0040 (8)0.0296 (8)0.0036 (8)
O30.0756 (11)0.0487 (10)0.0802 (12)0.0015 (8)0.0203 (8)−0.0082 (8)
O1S0.0866 (13)0.0528 (11)0.0914 (14)−0.0062 (10)−0.0048 (11)−0.0055 (10)
N10.0542 (11)0.0577 (13)0.0540 (11)0.0038 (9)0.0097 (8)−0.0022 (8)
N20.0619 (12)0.0503 (13)0.0637 (12)0.0046 (9)0.0178 (9)−0.0037 (9)
N30.0641 (12)0.0469 (12)0.0710 (13)0.0047 (9)0.0225 (10)−0.0005 (9)
C10.0627 (15)0.0601 (16)0.0788 (17)−0.0095 (12)0.0176 (13)0.0023 (12)
C20.0637 (15)0.0726 (19)0.0847 (18)−0.0111 (13)0.0283 (13)0.0069 (14)
C30.0536 (14)0.0717 (18)0.0668 (15)0.0032 (12)0.0176 (11)0.0055 (12)
C40.0558 (13)0.0601 (15)0.0673 (15)0.0026 (11)0.0138 (11)0.0012 (11)
C50.0459 (12)0.0585 (15)0.0536 (13)−0.0029 (10)0.0077 (9)0.0074 (10)
C60.0494 (12)0.0576 (15)0.0505 (12)−0.0026 (10)0.0037 (9)0.0044 (10)
C70.0519 (13)0.0595 (15)0.0518 (13)−0.0010 (10)−0.0001 (10)0.0014 (10)
C80.0812 (18)0.0603 (16)0.0766 (17)−0.0002 (13)0.0116 (13)−0.0021 (12)
C90.0521 (13)0.0493 (14)0.0560 (14)0.0013 (10)0.0023 (10)−0.0033 (10)
C100.0536 (13)0.0552 (15)0.0548 (13)0.0017 (10)0.0076 (10)−0.0023 (10)
C110.0765 (17)0.0573 (16)0.0808 (17)0.0057 (13)0.0251 (13)0.0006 (13)
C120.097 (2)0.0648 (18)0.0831 (19)−0.0106 (15)0.0328 (15)0.0019 (13)
C130.0797 (19)0.095 (2)0.089 (2)−0.0092 (16)0.0368 (15)−0.0005 (17)
C140.093 (2)0.089 (2)0.120 (3)0.0294 (17)0.0550 (19)0.0167 (18)
C150.0864 (19)0.0643 (18)0.091 (2)0.0191 (14)0.0335 (15)0.0115 (14)
C160.100 (2)0.091 (3)0.103 (2)0.0114 (18)0.0410 (18)−0.0163 (18)
O1—C31.360 (3)C4—H40.9300
O1—C161.403 (3)C5—C61.393 (3)
O2—C51.351 (3)C6—C71.462 (3)
O2—H2'0.881 (10)C7—C81.485 (3)
O3—C91.212 (3)C8—H8A0.9600
O1S—H1A0.857 (18)C8—H8B0.9600
O1S—H1B0.837 (18)C8—H8C0.9600
N1—C71.289 (3)C10—C151.363 (3)
N1—N21.358 (3)C10—C111.373 (3)
N2—C91.361 (3)C11—C121.368 (3)
N2—H2N0.882 (10)C11—H110.9300
N3—C91.348 (3)C12—C131.363 (4)
N3—C101.400 (3)C12—H120.9300
N3—H30.878 (10)C13—C141.354 (4)
C1—C21.360 (4)C13—H130.9300
C1—C61.397 (3)C14—C151.370 (4)
C1—H10.9300C14—H140.9300
C2—C31.379 (4)C15—H150.9300
C2—H20.9300C16—H16A0.9600
C3—C41.368 (3)C16—H16B0.9600
C4—C51.381 (3)C16—H16C0.9600
C3—O1—C16118.8 (2)C7—C8—H8B109.5
C5—O2—H2'103 (2)H8A—C8—H8B109.5
H1A—O1S—H1B102 (3)C7—C8—H8C109.5
C7—N1—N2119.7 (2)H8A—C8—H8C109.5
N1—N2—C9117.21 (19)H8B—C8—H8C109.5
N1—N2—H2N123.3 (16)O3—C9—N3125.3 (2)
C9—N2—H2N119.4 (16)O3—C9—N2122.5 (2)
C9—N3—C10127.4 (2)N3—C9—N2112.2 (2)
C9—N3—H3117 (2)C15—C10—C11119.0 (2)
C10—N3—H3115 (2)C15—C10—N3116.9 (2)
C2—C1—C6122.1 (2)C11—C10—N3124.0 (2)
C2—C1—H1118.9C12—C11—C10120.0 (2)
C6—C1—H1118.9C12—C11—H11120.0
C1—C2—C3120.0 (2)C10—C11—H11120.0
C1—C2—H2120.0C13—C12—C11121.0 (3)
C3—C2—H2120.0C13—C12—H12119.5
O1—C3—C4124.3 (2)C11—C12—H12119.5
O1—C3—C2115.8 (2)C14—C13—C12118.6 (3)
C4—C3—C2119.9 (2)C14—C13—H13120.7
C3—C4—C5119.8 (2)C12—C13—H13120.7
C3—C4—H4120.1C13—C14—C15121.2 (3)
C5—C4—H4120.1C13—C14—H14119.4
O2—C5—C4116.3 (2)C15—C14—H14119.4
O2—C5—C6121.9 (2)C10—C15—C14120.1 (3)
C4—C5—C6121.8 (2)C10—C15—H15119.9
C5—C6—C1116.3 (2)C14—C15—H15119.9
C5—C6—C7122.9 (2)O1—C16—H16A109.5
C1—C6—C7120.8 (2)O1—C16—H16B109.5
N1—C7—C6115.4 (2)H16A—C16—H16B109.5
N1—C7—C8123.0 (2)O1—C16—H16C109.5
C6—C7—C8121.6 (2)H16A—C16—H16C109.5
C7—C8—H8A109.5H16B—C16—H16C109.5
C7—N1—N2—C9−177.41 (18)C5—C6—C7—N1−8.6 (3)
C6—C1—C2—C3−1.0 (4)C1—C6—C7—N1173.59 (19)
C16—O1—C3—C4−4.5 (4)C5—C6—C7—C8168.3 (2)
C16—O1—C3—C2174.0 (2)C1—C6—C7—C8−9.5 (3)
C1—C2—C3—O1−175.5 (2)C10—N3—C9—O31.1 (4)
C1—C2—C3—C43.0 (4)C10—N3—C9—N2179.5 (2)
O1—C3—C4—C5176.5 (2)N1—N2—C9—O3−0.1 (3)
C2—C3—C4—C5−1.8 (4)N1—N2—C9—N3−178.56 (18)
C3—C4—C5—O2−179.4 (2)C9—N3—C10—C15165.1 (2)
C3—C4—C5—C6−1.4 (3)C9—N3—C10—C11−17.3 (4)
O2—C5—C6—C1−178.8 (2)C15—C10—C11—C12−0.8 (4)
C4—C5—C6—C13.3 (3)N3—C10—C11—C12−178.4 (2)
O2—C5—C6—C73.4 (3)C10—C11—C12—C13−0.2 (4)
C4—C5—C6—C7−174.6 (2)C11—C12—C13—C140.5 (5)
C2—C1—C6—C5−2.1 (3)C12—C13—C14—C150.1 (5)
C2—C1—C6—C7175.8 (2)C11—C10—C15—C141.5 (4)
N2—N1—C7—C6178.56 (17)N3—C10—C15—C14179.2 (3)
N2—N1—C7—C81.7 (3)C13—C14—C15—C10−1.2 (5)
D—H···AD—HH···AD···AD—H···A
O2—H2′···N10.88 (1)1.71 (2)2.526 (2)154 (3)
N2—H2N···O1Si0.88 (1)2.08 (1)2.900 (3)154 (2)
N3—H3···O1Si0.88 (1)2.11 (2)2.918 (3)153 (3)
O1S—H1A···O20.86 (2)2.12 (2)2.925 (3)156 (3)
O1S—H1B···O3ii0.84 (2)1.90 (2)2.730 (3)174 (3)
C8—H8C···O3iii0.962.513.457 (3)167
C11—H11···O30.932.312.881 (3)119
C13—H13···O1iv0.932.603.489 (3)160
C8—H8A···Cg1v0.962.923.543 (3)123
C16—H16C···Cg1vi0.962.793.645 (4)148
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the C1–C6 ring.

D—H⋯A D—HH⋯A DA D—H⋯A
O2—H2′⋯N10.88 (1)1.71 (2)2.526 (2)154 (3)
N2—H2N⋯O1S i 0.88 (1)2.08 (1)2.900 (3)154 (2)
N3—H3⋯O1S i 0.88 (1)2.11 (2)2.918 (3)153 (3)
O1S—H1A⋯O20.86 (2)2.12 (2)2.925 (3)156 (3)
O1S—H1B⋯O3ii 0.84 (2)1.90 (2)2.730 (3)174 (3)
C8—H8C⋯O3iii 0.962.513.457 (3)167
C11—H11⋯O30.932.312.881 (3)119
C13—H13⋯O1iv 0.932.603.489 (3)160
C8—H8ACg1v 0.962.923.543 (3)123
C16—H16CCg1vi 0.962.793.645 (4)148

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .

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