Literature DB >> 24860293

Ethyl 3-(10-bromo-anthracen-9-yl)-5-methyl-1,2-oxazole-4-carboxyl-ate.

Chun Li1, Michael J Campbell2, Matthew J Weaver2, Nathan S Duncan2, Janet L Hunting1, Nicholas R Natale2.   

Abstract

In the title compound, C21H16BrNO3, the mean planes of the anthracene tricycle and isoxazole ring are inclined to each other at a dihedral angle of 72.12 (7)°. The carb-oxy group is slightly out of the isoxazole mean plane, with a maximum deviation of 0.070 (5) Å for the carbonyl O atom. In the crystal, pairs of weak C-H⋯O hydrogen bonds link the mol-ecules into dimers, and weak C-H⋯N inter-actions further link these dimers into corrugated layers parallel to the bc plane.

Entities:  

Year:  2013        PMID: 24860293      PMCID: PMC4004437          DOI: 10.1107/S1600536813031395

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of anthryl isoxazoles, see: Mosher & Natale (1995 ▶); Zhou et al. (1997 ▶); Han & Natale (2001 ▶); Rider et al. (2010 ▶); Mirzaei et al. (2012 ▶). For related structures, see: Mosher et al. (1996 ▶); Han et al. (2002 ▶, 2003 ▶); Li et al. (2006 ▶, 2008 ▶). For the anti­tumor activity of aryl isoxazole amides (AIMs), see: Han et al. (2009 ▶); Gajewski et al. (2009 ▶); Balasubramanian et al. (2011 ▶); Neidle (2012 ▶); Kohn et al. (2012 ▶); Shoemaker (2006 ▶).

Experimental

Crystal data

C21H16BrNO3 M = 410.26 Monoclinic, a = 8.8437 (1) Å b = 16.7099 (2) Å c = 11.7157 (2) Å β = 92.419 (1)° V = 1729.77 (4) Å3 Z = 4 Mo Kα radiation μ = 2.40 mm−1 T = 100 K 0.49 × 0.47 × 0.38 mm

Data collection

Bruker SMART BREEZE CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008 ▶) T min = 0.39, T max = 0.47 34958 measured reflections 4290 independent reflections 4128 reflections with I > 2σ(I) R int = 0.020

Refinement

R[F 2 > 2σ(F 2)] = 0.025 wR(F 2) = 0.074 S = 1.05 4290 reflections 237 parameters H-atom parameters constrained Δρmax = 0.51 e Å−3 Δρmin = −0.39 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXL97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXS97 (Sheldrick, 2008 ▶); molecular graphics: OLEX2 (Dolomanov et al., 2009 ▶); software used to prepare material for publication: OLEX2 and publCIF (Westrip, 2010 ▶). Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536813031395/cv5433sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813031395/cv5433Isup2.hkl Click here for additional data file. Supplementary material file. DOI: 10.1107/S1600536813031395/cv5433Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H16BrNO3F(000) = 832
Mr = 410.26Dx = 1.575 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 8.8437 (1) ÅCell parameters from 330 reflections
b = 16.7099 (2) Åθ = 0.3–27.5°
c = 11.7157 (2) ŵ = 2.40 mm1
β = 92.419 (1)°T = 100 K
V = 1729.77 (4) Å3Prism, translucent yellow
Z = 40.49 × 0.47 × 0.38 mm
Bruker SMART BREEZE CCD diffractometer4128 reflections with I > 2σ(I)
Radiation source: 2 kW sealed X-ray tubeRint = 0.020
π and ω scansθmax = 28.3°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Bruker, 2008)h = −11→11
Tmin = 0.39, Tmax = 0.47k = −22→22
34958 measured reflectionsl = −15→14
4290 independent reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.025H-atom parameters constrained
wR(F2) = 0.074w = 1/[σ2(Fo2) + (0.0448P)2 + 1.2294P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max = 0.002
4290 reflectionsΔρmax = 0.51 e Å3
237 parametersΔρmin = −0.39 e Å3
0 restraints
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br10.65922 (2)0.19002 (2)0.12783 (2)0.02178 (7)
O10.29601 (12)0.46676 (6)0.02087 (8)0.0145 (2)
O20.14962 (15)0.57548 (8)−0.00887 (10)0.0261 (3)
O30.06569 (12)0.53843 (6)0.34089 (9)0.0145 (2)
N10.15853 (14)0.46963 (7)0.35626 (10)0.0142 (2)
C10.31314 (18)0.19895 (9)0.06508 (13)0.0166 (3)
H10.38000.15800.04240.020*
C20.16567 (19)0.19731 (9)0.02681 (13)0.0187 (3)
H20.13100.1554−0.02240.022*
C30.06357 (17)0.25744 (9)0.05964 (12)0.0167 (3)
H3−0.03900.25550.03230.020*
C40.11134 (17)0.31807 (8)0.13019 (12)0.0135 (3)
H40.04120.35770.15200.016*
C50.52484 (16)0.45590 (8)0.35132 (12)0.0141 (3)
H50.45710.49690.37250.017*
C60.67305 (17)0.45991 (9)0.38810 (12)0.0171 (3)
H60.70750.50340.43450.020*
C70.77617 (17)0.39918 (10)0.35718 (13)0.0191 (3)
H70.87910.40220.38340.023*
C80.72856 (16)0.33668 (9)0.29027 (13)0.0175 (3)
H80.79930.29690.27010.021*
C90.52055 (16)0.26791 (8)0.17830 (12)0.0133 (2)
C100.31823 (15)0.38718 (8)0.23963 (11)0.0111 (2)
C110.46912 (15)0.39100 (8)0.28134 (11)0.0116 (2)
C120.57441 (16)0.32977 (8)0.24980 (12)0.0132 (3)
C130.36915 (16)0.26146 (8)0.13894 (11)0.0126 (2)
C140.26560 (16)0.32284 (8)0.17184 (11)0.0114 (2)
C150.21490 (15)0.45584 (8)0.25655 (11)0.0111 (2)
C160.16273 (15)0.51365 (8)0.17353 (11)0.0118 (2)
C170.06993 (15)0.56274 (8)0.23177 (12)0.0128 (2)
C18−0.02091 (17)0.63431 (9)0.19866 (13)0.0184 (3)
H18A−0.10800.63840.24740.028*
H18B−0.05670.62950.11860.028*
H18C0.04190.68240.20810.028*
C190.19946 (16)0.52302 (8)0.05278 (12)0.0139 (3)
C200.34574 (17)0.47134 (9)−0.09567 (12)0.0162 (3)
H20A0.41470.5174−0.10440.019*
H20B0.25780.4778−0.15000.019*
C210.42720 (19)0.39376 (10)−0.11786 (13)0.0211 (3)
H21A0.46470.3944−0.19540.032*
H21B0.35710.3488−0.11020.032*
H21C0.51260.3878−0.06240.032*
U11U22U33U12U13U23
Br10.01713 (9)0.01729 (9)0.03139 (10)0.00372 (5)0.00673 (6)−0.00296 (5)
O10.0174 (5)0.0153 (5)0.0111 (4)0.0030 (4)0.0040 (4)0.0021 (4)
O20.0333 (7)0.0279 (6)0.0175 (5)0.0158 (5)0.0050 (5)0.0084 (4)
O30.0153 (5)0.0136 (5)0.0146 (5)0.0031 (4)0.0024 (4)−0.0010 (4)
N10.0152 (6)0.0125 (5)0.0150 (5)0.0029 (4)0.0015 (4)0.0002 (4)
C10.0210 (7)0.0129 (6)0.0162 (6)−0.0005 (5)0.0036 (5)−0.0019 (5)
C20.0237 (8)0.0157 (7)0.0167 (7)−0.0045 (5)0.0010 (6)−0.0026 (5)
C30.0169 (7)0.0167 (6)0.0162 (6)−0.0039 (5)−0.0020 (5)0.0016 (5)
C40.0143 (7)0.0125 (6)0.0135 (6)0.0005 (5)0.0004 (5)0.0020 (5)
C50.0157 (6)0.0142 (6)0.0124 (6)0.0002 (5)0.0003 (5)0.0002 (5)
C60.0177 (7)0.0183 (7)0.0150 (6)−0.0038 (5)−0.0016 (5)−0.0002 (5)
C70.0128 (6)0.0222 (7)0.0219 (7)−0.0011 (5)−0.0023 (5)0.0041 (6)
C80.0121 (6)0.0175 (7)0.0227 (7)0.0020 (5)0.0006 (5)0.0028 (5)
C90.0131 (6)0.0108 (6)0.0162 (6)0.0029 (5)0.0042 (5)0.0010 (5)
C100.0123 (6)0.0110 (6)0.0101 (5)0.0013 (5)0.0013 (4)0.0018 (4)
C110.0126 (6)0.0115 (6)0.0106 (6)0.0000 (5)0.0012 (4)0.0019 (4)
C120.0124 (6)0.0128 (6)0.0143 (6)0.0008 (5)0.0015 (5)0.0033 (5)
C130.0147 (6)0.0107 (6)0.0126 (6)0.0001 (5)0.0024 (5)0.0014 (5)
C140.0125 (6)0.0111 (5)0.0107 (6)−0.0004 (5)0.0013 (5)0.0021 (5)
C150.0108 (6)0.0104 (6)0.0122 (6)−0.0010 (5)−0.0003 (4)−0.0007 (4)
C160.0114 (6)0.0111 (6)0.0129 (6)0.0004 (5)−0.0005 (4)0.0004 (5)
C170.0121 (6)0.0120 (6)0.0144 (6)−0.0012 (5)−0.0008 (5)−0.0009 (5)
C180.0179 (7)0.0135 (6)0.0235 (7)0.0043 (5)−0.0016 (5)−0.0019 (5)
C190.0132 (6)0.0145 (6)0.0139 (6)0.0001 (5)0.0006 (5)−0.0001 (5)
C200.0207 (7)0.0175 (7)0.0106 (6)−0.0008 (5)0.0049 (5)0.0010 (5)
C210.0246 (8)0.0213 (7)0.0180 (7)0.0028 (6)0.0063 (6)−0.0027 (6)
Br1—C91.8996 (13)C8—H80.9500
O1—C191.3340 (17)C8—C121.4290 (19)
O1—C201.4539 (16)C9—C121.4013 (19)
O2—C191.2073 (18)C9—C131.4017 (19)
O3—N11.4197 (15)C10—C111.4031 (18)
O3—C171.3435 (17)C10—C141.4043 (19)
N1—C151.3097 (18)C10—C151.4853 (18)
C1—H10.9500C11—C121.4420 (19)
C1—C21.361 (2)C13—C141.4384 (19)
C1—C131.4314 (19)C15—C161.4332 (18)
C2—H20.9500C16—C171.3636 (19)
C2—C31.415 (2)C16—C191.4731 (18)
C3—H30.9500C17—C181.4832 (19)
C3—C41.363 (2)C18—H18A0.9800
C4—H40.9500C18—H18B0.9800
C4—C141.4316 (19)C18—H18C0.9800
C5—H50.9500C20—H20A0.9900
C5—C61.364 (2)C20—H20B0.9900
C5—C111.4342 (19)C20—C211.511 (2)
C6—H60.9500C21—H21A0.9800
C6—C71.422 (2)C21—H21B0.9800
C7—H70.9500C21—H21C0.9800
C7—C81.362 (2)
C19—O1—C20116.66 (11)C9—C12—C11118.01 (12)
C17—O3—N1109.05 (10)C1—C13—C14118.32 (13)
C15—N1—O3105.62 (11)C9—C13—C1123.80 (13)
C2—C1—H1119.5C9—C13—C14117.85 (12)
C2—C1—C13121.07 (14)C4—C14—C13118.50 (12)
C13—C1—H1119.5C10—C14—C4121.59 (13)
C1—C2—H2119.7C10—C14—C13119.86 (13)
C1—C2—C3120.64 (13)N1—C15—C10120.96 (12)
C3—C2—H2119.7N1—C15—C16111.28 (12)
C2—C3—H3119.8C16—C15—C10127.76 (12)
C4—C3—C2120.50 (14)C15—C16—C19130.21 (12)
C4—C3—H3119.8C17—C16—C15104.43 (12)
C3—C4—H4119.5C17—C16—C19125.33 (12)
C3—C4—C14120.97 (13)O3—C17—C16109.62 (12)
C14—C4—H4119.5O3—C17—C18117.14 (12)
C6—C5—H5119.3C16—C17—C18133.24 (13)
C6—C5—C11121.34 (13)C17—C18—H18A109.5
C11—C5—H5119.3C17—C18—H18B109.5
C5—C6—H6119.9C17—C18—H18C109.5
C5—C6—C7120.18 (14)H18A—C18—H18B109.5
C7—C6—H6119.9H18A—C18—H18C109.5
C6—C7—H7119.7H18B—C18—H18C109.5
C8—C7—C6120.54 (13)O1—C19—C16111.34 (12)
C8—C7—H7119.7O2—C19—O1124.46 (13)
C7—C8—H8119.3O2—C19—C16124.19 (13)
C7—C8—C12121.36 (14)O1—C20—H20A110.5
C12—C8—H8119.3O1—C20—H20B110.5
C12—C9—Br1118.94 (10)O1—C20—C21106.36 (11)
C12—C9—C13123.32 (12)H20A—C20—H20B108.6
C13—C9—Br1117.72 (10)C21—C20—H20A110.5
C11—C10—C14121.29 (12)C21—C20—H20B110.5
C11—C10—C15120.00 (12)C20—C21—H21A109.5
C14—C10—C15118.41 (12)C20—C21—H21B109.5
C5—C11—C12118.23 (12)C20—C21—H21C109.5
C10—C11—C5122.15 (12)H21A—C21—H21B109.5
C10—C11—C12119.57 (12)H21A—C21—H21C109.5
C8—C12—C11118.36 (13)H21B—C21—H21C109.5
C9—C12—C8123.60 (13)
Br1—C9—C12—C8−1.87 (19)C10—C15—C16—C19−2.4 (2)
Br1—C9—C12—C11176.22 (10)C11—C5—C6—C70.1 (2)
Br1—C9—C13—C11.24 (19)C11—C10—C14—C4179.20 (12)
Br1—C9—C13—C14−176.59 (9)C11—C10—C14—C13−3.33 (19)
O3—N1—C15—C10−179.64 (11)C11—C10—C15—N1−75.68 (17)
O3—N1—C15—C160.03 (15)C11—C10—C15—C16104.71 (16)
N1—O3—C17—C16−0.55 (15)C12—C9—C13—C1179.42 (13)
N1—O3—C17—C18179.89 (11)C12—C9—C13—C141.6 (2)
N1—C15—C16—C17−0.35 (16)C13—C1—C2—C3−0.3 (2)
N1—C15—C16—C19178.00 (13)C13—C9—C12—C8179.97 (13)
C1—C2—C3—C40.0 (2)C13—C9—C12—C11−1.9 (2)
C1—C13—C14—C40.65 (19)C14—C10—C11—C5−179.58 (12)
C1—C13—C14—C10−176.89 (12)C14—C10—C11—C122.97 (19)
C2—C1—C13—C9−177.91 (14)C14—C10—C15—N1110.56 (15)
C2—C1—C13—C14−0.1 (2)C14—C10—C15—C16−69.05 (18)
C2—C3—C4—C140.6 (2)C15—C10—C11—C56.85 (19)
C3—C4—C14—C10176.60 (13)C15—C10—C11—C12−170.60 (12)
C3—C4—C14—C13−0.9 (2)C15—C10—C14—C4−7.13 (19)
C5—C6—C7—C80.3 (2)C15—C10—C14—C13170.34 (12)
C5—C11—C12—C80.29 (19)C15—C16—C17—O30.54 (15)
C5—C11—C12—C9−177.91 (12)C15—C16—C17—C18−179.99 (15)
C6—C5—C11—C10−177.89 (13)C15—C16—C19—O10.5 (2)
C6—C5—C11—C12−0.4 (2)C15—C16—C19—O2−178.75 (15)
C6—C7—C8—C12−0.4 (2)C17—O3—N1—C150.32 (14)
C7—C8—C12—C9178.20 (14)C17—C16—C19—O1178.55 (13)
C7—C8—C12—C110.1 (2)C17—C16—C19—O2−0.7 (2)
C9—C13—C14—C4178.60 (12)C19—O1—C20—C21−169.06 (12)
C9—C13—C14—C101.06 (19)C19—C16—C17—O3−177.91 (12)
C10—C11—C12—C8177.84 (12)C19—C16—C17—C181.6 (2)
C10—C11—C12—C9−0.36 (19)C20—O1—C19—O21.5 (2)
C10—C15—C16—C17179.29 (13)C20—O1—C19—C16−177.73 (11)
D—H···AD—HH···AD···AD—H···A
C2—H2···N1i0.952.543.4305 (19)155
C4—H4···O2ii0.952.583.1990 (18)123
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C2—H2⋯N1i 0.952.543.4305 (19)155
C4—H4⋯O2ii 0.952.583.1990 (18)123

Symmetry codes: (i) ; (ii) .

  6 in total

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3.  Improved synthesis of 3-aryl isoxazoles containing fused aromatic rings.

Authors:  Yousef R Mirzaei; Matthew J Weaver; Scott A Steiger; Alison K Kearns; Mariusz P Gajewski; Kevin C Rider; Howard D Beall; N R Natale
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4.  Design, synthesis and biological evaluation of a novel class of anticancer agents: anthracenylisoxazole lexitropsin conjugates.

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Journal:  Bioorg Med Chem       Date:  2008-12-31       Impact factor: 3.641

Review 5.  Targeting G-quadruplexes in gene promoters: a novel anticancer strategy?

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6.  Gene expression profiles of the NCI-60 human tumor cell lines define molecular interaction networks governing cell migration processes.

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1.  AIMing towards improved antitumor efficacy.

Authors:  Matthew J Weaver; Alison K Kearns; Sascha Stump; Chun Li; Mariusz P Gajewski; Kevin C Rider; Donald S Backos; Philip R Reigan; Howard D Beall; Nicholas R Natale
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2.  Syntheses and crystal structures of a nitro-anthracene-isoxazole and its oxidation product.

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