Literature DB >> 21455236

Targeting G-quadruplexes in gene promoters: a novel anticancer strategy?

Shankar Balasubramanian1, Laurence H Hurley, Stephen Neidle.   

Abstract

G-quadruplexes are four-stranded DNA structures that are over-represented in gene promoter regions and are viewed as emerging therapeutic targets in oncology, as transcriptional repression of oncogenes through stabilization of these structures could be a novel anticancer strategy. Many gene promoter G-quadruplexes have physicochemical properties and structural characteristics that might make them druggable, and their structural diversity suggests that a high degree of selectivity might be possible. Here, we describe the evidence for G-quadruplexes in gene promoters and discuss their potential as therapeutic targets, as well as progress in the development of strategies to harness this potential through intervention with small-molecule ligands.

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Year:  2011        PMID: 21455236      PMCID: PMC3119469          DOI: 10.1038/nrd3428

Source DB:  PubMed          Journal:  Nat Rev Drug Discov        ISSN: 1474-1776            Impact factor:   84.694


  139 in total

1.  Electrospray mass spectrometry of telomeric RNA (TERRA) reveals the formation of stable multimeric G-quadruplex structures.

Authors:  Gavin W Collie; Gary N Parkinson; Stephen Neidle; Frédéric Rosu; Edwin De Pauw; Valérie Gabelica
Journal:  J Am Chem Soc       Date:  2010-07-14       Impact factor: 15.419

2.  Inhibition of telomerase by G-quartet DNA structures.

Authors:  A M Zahler; J R Williamson; T R Cech; D M Prescott
Journal:  Nature       Date:  1991-04-25       Impact factor: 49.962

3.  The new models of the human telomere d[AGGG(TTAGGG)3] in K+ solution.

Authors:  Yan Xu; Yuki Noguchi; Hiroshi Sugiyama
Journal:  Bioorg Med Chem       Date:  2006-05-08       Impact factor: 3.641

Review 4.  c-MYC: more than just a matter of life and death.

Authors:  Stella Pelengaris; Mike Khan; Gerard Evan
Journal:  Nat Rev Cancer       Date:  2002-10       Impact factor: 60.716

5.  G-quadruplex-binding benzo[a]phenoxazines down-regulate c-KIT expression in human gastric carcinoma cells.

Authors:  Keith I E McLuckie; Zoë A E Waller; Deborah A Sanders; David Alves; Raphaël Rodriguez; Jyotirmayee Dash; Grahame J McKenzie; Ashok R Venkitaraman; Shankar Balasubramanian
Journal:  J Am Chem Soc       Date:  2011-02-04       Impact factor: 15.419

6.  Human telomeric sequence forms a hybrid-type intramolecular G-quadruplex structure with mixed parallel/antiparallel strands in potassium solution.

Authors:  Attila Ambrus; Ding Chen; Jixun Dai; Tiffanie Bialis; Roger A Jones; Danzhou Yang
Journal:  Nucleic Acids Res       Date:  2006-05-19       Impact factor: 16.971

7.  Quadruplex structures of muscle gene promoter sequences enhance in vivo MyoD-dependent gene expression.

Authors:  Jeny Shklover; Pnina Weisman-Shomer; Anat Yafe; Michael Fry
Journal:  Nucleic Acids Res       Date:  2010-01-06       Impact factor: 16.971

8.  Metastases suppressor NM23-H2 interaction with G-quadruplex DNA within c-MYC promoter nuclease hypersensitive element induces c-MYC expression.

Authors:  Ram Krishna Thakur; Praveen Kumar; Kangkan Halder; Anjali Verma; Anirban Kar; Jean-Luc Parent; Richa Basundra; Akinchan Kumar; Shantanu Chowdhury
Journal:  Nucleic Acids Res       Date:  2008-11-25       Impact factor: 16.971

9.  Formation of the G-quadruplex and i-motif structures in retinoblastoma susceptibility genes (Rb).

Authors:  Yan Xu; Hiroshi Sugiyama
Journal:  Nucleic Acids Res       Date:  2006-02-07       Impact factor: 16.971

10.  Genomic distribution and functional analyses of potential G-quadruplex-forming sequences in Saccharomyces cerevisiae.

Authors:  Steve G Hershman; Qijun Chen; Julia Y Lee; Marina L Kozak; Peng Yue; Li-San Wang; F Brad Johnson
Journal:  Nucleic Acids Res       Date:  2007-11-13       Impact factor: 16.971

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  449 in total

1.  In silico analysis of regulatory and structural motifs of the ovine HSP90AA1 gene.

Authors:  Carmen González; Judit Salces-Ortiz; Jorge H Calvo; M Magdalena Serrano
Journal:  Cell Stress Chaperones       Date:  2016-01-26       Impact factor: 3.667

2.  Sequence-specific recognition of DNA minor groove by an NIR-fluorescence switch-on probe and its potential applications.

Authors:  Nagarjun Narayanaswamy; Shubhajit Das; Pralok K Samanta; Khadija Banu; Guru Prasad Sharma; Neelima Mondal; Suman K Dhar; Swapan K Pati; T Govindaraju
Journal:  Nucleic Acids Res       Date:  2015-09-08       Impact factor: 16.971

Review 3.  Unravelling the genomic targets of small molecules using high-throughput sequencing.

Authors:  Raphaël Rodriguez; Kyle M Miller
Journal:  Nat Rev Genet       Date:  2014-10-14       Impact factor: 53.242

4.  Overlapping but distinct: a new model for G-quadruplex biochemical specificity.

Authors:  Martin Volek; Sofia Kolesnikova; Katerina Svehlova; Pavel Srb; Ráchel Sgallová; Tereza Streckerová; Juan A Redondo; Václav Veverka; Edward A Curtis
Journal:  Nucleic Acids Res       Date:  2021-02-26       Impact factor: 16.971

5.  G-Quadruplex DNA Motifs in the Malaria Parasite Plasmodium falciparum and Their Potential as Novel Antimalarial Drug Targets.

Authors:  Lynne M Harris; Katelyn R Monsell; Florian Noulin; M Toyin Famodimu; Nicolas Smargiasso; Christian Damblon; Paul Horrocks; Catherine J Merrick
Journal:  Antimicrob Agents Chemother       Date:  2018-02-23       Impact factor: 5.191

6.  Microscopic rearrangement of bound minor groove binders detected by NMR.

Authors:  Michael Rettig; Markus W Germann; Mohamed A Ismail; Adalgisa Batista-Parra; Manoj Munde; David W Boykin; W David Wilson
Journal:  J Phys Chem B       Date:  2012-05-02       Impact factor: 2.991

Review 7.  Targeting RNA in mammalian systems with small molecules.

Authors:  Anita Donlic; Amanda E Hargrove
Journal:  Wiley Interdiscip Rev RNA       Date:  2018-05-03       Impact factor: 9.957

8.  Identification of RECQ1-regulated transcriptome uncovers a role of RECQ1 in regulation of cancer cell migration and invasion.

Authors:  Xiao Ling Li; Xing Lu; Swetha Parvathaneni; Sven Bilke; Hongen Zhang; Saravanabhavan Thangavel; Alessandro Vindigni; Toshifumi Hara; Yuelin Zhu; Paul S Meltzer; Ashish Lal; Sudha Sharma
Journal:  Cell Cycle       Date:  2014       Impact factor: 4.534

Review 9.  Binding to the DNA minor groove by heterocyclic dications: from AT-specific monomers to GC recognition with dimers.

Authors:  Rupesh Nanjunda; W David Wilson
Journal:  Curr Protoc Nucleic Acid Chem       Date:  2012-12

10.  Cooperative Heteroligand Interaction with G-Quadruplexes Shows Evidence of Allosteric Binding.

Authors:  Shankar Pandey; Yuanyuan Li; Montwaun D Young; Shankar Mandal; Laichun Lu; Jacob T Shelley; Hanbin Mao
Journal:  Biochemistry       Date:  2020-09-03       Impact factor: 3.162

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