Literature DB >> 24839377

Categories and Functional Units: An Infinite Hierarchical Model for Brain Activations.

Danial Lashkari1, Ramesh Sridharan1, Polina Golland1.   

Abstract

We present a model that describes the structure in the responses of different brain areas to a set of stimuli in terms of stimulus categories (clusters of stimuli) and functional units (clusters of voxels). We assume that voxels within a unit respond similarly to all stimuli from the same category, and design a nonparametric hierarchical model to capture inter-subject variability among the units. The model explicitly encodes the relationship between brain activations and fMRI time courses. A variational inference algorithm derived based on the model learns categories, units, and a set of unit-category activation probabilities from data. When applied to data from an fMRI study of object recognition, the method finds meaningful and consistent clusterings of stimuli into categories and voxels into units.

Entities:  

Year:  2010        PMID: 24839377      PMCID: PMC4022600     

Source DB:  PubMed          Journal:  Adv Neural Inf Process Syst        ISSN: 1049-5258


  14 in total

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Journal:  Magn Reson Med       Date:  1999-12       Impact factor: 4.668

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Journal:  Proc Int Conf Intell Syst Mol Biol       Date:  2000

3.  Probabilistic independent component analysis for functional magnetic resonance imaging.

Authors:  Christian F Beckmann; Stephen M Smith
Journal:  IEEE Trans Med Imaging       Date:  2004-02       Impact factor: 10.048

4.  Feature characterization in fMRI data: the Information Bottleneck approach.

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5.  Beyond mind-reading: multi-voxel pattern analysis of fMRI data.

Authors:  Kenneth A Norman; Sean M Polyn; Greg J Detre; James V Haxby
Journal:  Trends Cogn Sci       Date:  2006-08-08       Impact factor: 20.229

6.  Analysis of fMRI data by blind separation into independent spatial components.

Authors:  M J McKeown; S Makeig; G G Brown; T P Jung; S S Kindermann; A J Bell; T J Sejnowski
Journal:  Hum Brain Mapp       Date:  1998       Impact factor: 5.038

7.  Nonparametric Hierarchical Bayesian Model for Functional Brain Parcellation.

Authors:  Danial Lashkari; Ramesh Sridharan; Edward Vul; Po-Jang Hsieh; Nancy Kanwisher; Polina Golland
Journal:  Conf Comput Vis Pattern Recognit Workshops       Date:  2010-06-13

8.  Spectral biclustering of microarray data: coclustering genes and conditions.

Authors:  Yuval Kluger; Ronen Basri; Joseph T Chang; Mark Gerstein
Journal:  Genome Res       Date:  2003-04       Impact factor: 9.043

9.  Exploratory fMRI analysis without spatial normalization.

Authors:  Danial Lashkari; Polina Golland
Journal:  Inf Process Med Imaging       Date:  2009

10.  Accurate and robust brain image alignment using boundary-based registration.

Authors:  Douglas N Greve; Bruce Fischl
Journal:  Neuroimage       Date:  2009-06-30       Impact factor: 6.556

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  1 in total

1.  The role of diversity in complex ICA algorithms for fMRI analysis.

Authors:  Wei Du; Yuri Levin-Schwartz; Geng-Shen Fu; Sai Ma; Vince D Calhoun; Tülay Adalı
Journal:  J Neurosci Methods       Date:  2016-03-15       Impact factor: 2.390

  1 in total

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