Literature DB >> 19694280

Exploratory fMRI analysis without spatial normalization.

Danial Lashkari1, Polina Golland.   

Abstract

We present an exploratory method for simultaneous parcellation of multisubject fMRI data into functionally coherent areas. The method is based on a solely functional representation of the fMRI data and a hierarchical probabilistic model that accounts for both intersubject and intra-subject forms of variability in fMRI response. We employ a Variational Bayes approximation to fit the model to the data. The resulting algorithm finds a functional parcellation of the individual brains along with a set of population-level clusters, establishing correspondence between these two levels. The model eliminates the need for spatial normalization while still enabling us to fuse data from several subjects. We demonstrate the application of our method on a visual fMRI study.

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Year:  2009        PMID: 19694280      PMCID: PMC2836541          DOI: 10.1007/978-3-642-02498-6_33

Source DB:  PubMed          Journal:  Inf Process Med Imaging        ISSN: 1011-2499


  8 in total

1.  On clustering fMRI time series.

Authors:  C Goutte; P Toft; E Rostrup; F Nielsen; L K Hansen
Journal:  Neuroimage       Date:  1999-03       Impact factor: 6.556

Review 2.  The problem of functional localization in the human brain.

Authors:  Matthew Brett; Ingrid S Johnsrude; Adrian M Owen
Journal:  Nat Rev Neurosci       Date:  2002-03       Impact factor: 34.870

3.  Tensorial extensions of independent component analysis for multisubject FMRI analysis.

Authors:  C F Beckmann; S M Smith
Journal:  Neuroimage       Date:  2005-01-08       Impact factor: 6.556

4.  Dealing with the shortcomings of spatial normalization: multi-subject parcellation of fMRI datasets.

Authors:  Bertrand Thirion; Guillaume Flandin; Philippe Pinel; Alexis Roche; Philippe Ciuciu; Jean-Baptiste Poline
Journal:  Hum Brain Mapp       Date:  2006-08       Impact factor: 5.038

5.  Analysis of a large fMRI cohort: Statistical and methodological issues for group analyses.

Authors:  Bertrand Thirion; Philippe Pinel; Sébastien Mériaux; Alexis Roche; Stanislas Dehaene; Jean-Baptiste Poline
Journal:  Neuroimage       Date:  2007-01-18       Impact factor: 6.556

6.  Detection of spatial activation patterns as unsupervised segmentation of fMRI data.

Authors:  Polina Golland; Yulia Golland; Rafael Malach
Journal:  Med Image Comput Comput Assist Interv       Date:  2007

7.  Structural analysis of fMRI data revisited: improving the sensitivity and reliability of fMRI group studies.

Authors:  Bertrand Thirion; Philippe Pinel; Alan Tucholka; Alexis Roche; Philippe Ciuciu; Jean-François Mangin; Jean-Baptiste Poline
Journal:  IEEE Trans Med Imaging       Date:  2007-09       Impact factor: 10.048

8.  Analysis of fMRI data by blind separation into independent spatial components.

Authors:  M J McKeown; S Makeig; G G Brown; T P Jung; S S Kindermann; A J Bell; T J Sejnowski
Journal:  Hum Brain Mapp       Date:  1998       Impact factor: 5.038

  8 in total
  5 in total

1.  fMRI BOLD response in high-risk college students (Part 1): during exposure to alcohol, marijuana, polydrug and emotional picture cues.

Authors:  Suchismita Ray; Catherine Hanson; Stephen J Hanson; Marsha E Bates
Journal:  Alcohol Alcohol       Date:  2010-08-20       Impact factor: 2.826

2.  Nonparametric Hierarchical Bayesian Model for Functional Brain Parcellation.

Authors:  Danial Lashkari; Ramesh Sridharan; Edward Vul; Po-Jang Hsieh; Nancy Kanwisher; Polina Golland
Journal:  Conf Comput Vis Pattern Recognit Workshops       Date:  2010-06-13

3.  State-space models of mental processes from fMRI.

Authors:  Firdaus Janoos; Shantanu Singh; Raghu Machiraju; William M Wells; Istvan A Mórocz
Journal:  Inf Process Med Imaging       Date:  2011

4.  GraSP: geodesic Graph-based Segmentation with Shape Priors for the functional parcellation of the cortex.

Authors:  N Honnorat; H Eavani; T D Satterthwaite; R E Gur; R C Gur; C Davatzikos
Journal:  Neuroimage       Date:  2014-11-11       Impact factor: 6.556

5.  Categories and Functional Units: An Infinite Hierarchical Model for Brain Activations.

Authors:  Danial Lashkari; Ramesh Sridharan; Polina Golland
Journal:  Adv Neural Inf Process Syst       Date:  2010-01-01
  5 in total

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