| Literature DB >> 24839343 |
Friedrich Schotte1, Hyun Sun Cho1, Jayashree Soman2, Michael Wulff3, John S Olson2, Philip A Anfinrud1.
Abstract
We have developed the method of picosecond Laue crystallography and used this capability to probe ligand dynamics in tetrameric R-state hemoglobin (Hb). Time-resolved, 2 Å-resolution electron density maps of photolyzed HbCO reveal the time-dependent population of CO in the binding (A) and primary docking (B) sites of both α and β subunits from 100 ps to 10 μs. The proximity of the B site in the β subunit is about 0.25 Å closer to its A binding site, and its kBA rebinding rate (~300 μs-1) is six times faster, suggesting distal control of the rebinding dynamics. Geminate rebinding in the β subunit exhibits both prompt and delayed geminate phases. We developed a microscopic model to quantitatively explain the observed kinetics, with three states for the α subunit and four states for the β subunit. This model provides a consistent framework for interpreting rebinding kinetics reported in prior studies of both HbCO and HbO2.Entities:
Keywords: Geminate rebinding; Hemoglobin; Ligand migration; Time-resolved Laue crystallography
Year: 2013 PMID: 24839343 PMCID: PMC4020136 DOI: 10.1016/j.chemphys.2012.12.030
Source DB: PubMed Journal: Chem Phys ISSN: 0301-0104 Impact factor: 2.348