Literature DB >> 24839167

DYNAmic Multi-coIl TEchnique (DYNAMITE) shimming of the rat brain at 11.7 T.

Christoph Juchem1, Peter Herman, Basavaraju G Sanganahalli, Peter B Brown, Scott McIntyre, Terence W Nixon, Dan Green, Fahmeed Hyder, Robin A de Graaf.   

Abstract

The in vivo rat model is a workhorse in neuroscience research, preclinical studies and drug development. A repertoire of MR tools has been developed for its investigation; however, high levels of B0 magnetic field homogeneity are required for meaningful results. The homogenization of magnetic fields in the rat brain, i.e. shimming, is a difficult task because of a multitude of complex, susceptibility-induced field distortions. Conventional shimming with spherical harmonic (SH) functions is capable of compensating for shallow field distortions in limited areas, e.g. in the cortex, but performs poorly in difficult-to-shim subcortical structures or for the entire brain. Based on the recently introduced multi-coil approach for magnetic field modeling, the DYNAmic Multi-coIl TEchnique (DYNAMITE) is introduced for magnetic field shimming of the in vivo rat brain and its benefits for gradient-echo echo-planar imaging (EPI) are demonstrated. An integrated multi-coil/radiofrequency (MC/RF) system comprising 48 individual localized DC coils for B0 shimming and a surface transceive RF coil has been developed that allows MR investigations of the anesthetized rat brain in vivo. DYNAMITE shimming with this MC/RF set-up is shown to reduce the B0 standard deviation to a third of that achieved with current shim technology employing static first- through third-order SH shapes. The EPI signal over the rat brain increased by 31%, and a 24% gain in usable EPI voxels could be realized. DYNAMITE shimming is expected to critically benefit a wide range of preclinical and neuroscientific MR research. Improved magnetic field homogeneity, together with the achievable large brain coverage of this method, will be crucial when signal pathways, cortical circuitry or the brain's default network are studied. Together with the efficiency gains of MC-based shimming compared with SH approaches demonstrated recently, DYNAMITE shimming has the potential to replace conventional SH shim systems in small-bore animal scanners.
Copyright © 2014 John Wiley & Sons, Ltd.

Entities:  

Keywords:  dynamic shimming; magnetic field modeling; multi-coil; shimming; spherical harmonics

Mesh:

Year:  2014        PMID: 24839167      PMCID: PMC4120278          DOI: 10.1002/nbm.3133

Source DB:  PubMed          Journal:  NMR Biomed        ISSN: 0952-3480            Impact factor:   4.044


  40 in total

1.  Toward an in vivo neurochemical profile: quantification of 18 metabolites in short-echo-time (1)H NMR spectra of the rat brain.

Authors:  J Pfeuffer; I Tkác; S W Provencher; R Gruetter
Journal:  J Magn Reson       Date:  1999-11       Impact factor: 2.229

2.  Fast proton spectroscopic imaging with high signal-to-noise ratio: spectroscopic RARE.

Authors:  Wolfgang Dreher; Dieter Leibfritz
Journal:  Magn Reson Med       Date:  2002-03       Impact factor: 4.668

3.  A multisensory zone in rat parietotemporal cortex: intra- and extracellular physiology and thalamocortical connections.

Authors:  Barbara Brett-Green; Eva Fifková; David T Larue; Jeffery A Winer; Daniel S Barth
Journal:  J Comp Neurol       Date:  2003-05-26       Impact factor: 3.215

4.  Coupling of the cortical hemodynamic response to cortical and thalamic neuronal activity.

Authors:  Anna Devor; Istvan Ulbert; Andrew K Dunn; Suresh N Narayanan; Stephanie R Jones; Mark L Andermann; David A Boas; Anders M Dale
Journal:  Proc Natl Acad Sci U S A       Date:  2005-02-25       Impact factor: 11.205

5.  Fully automated shim mapping method for spectroscopic imaging of the mouse brain at 9.4 T.

Authors:  Naoyuki Miyasaka; Kan Takahashi; Hoby P Hetherington
Journal:  Magn Reson Med       Date:  2006-01       Impact factor: 4.668

6.  High resolution single-shot EPI at 7T.

Authors:  Oliver Speck; J Stadler; M Zaitsev
Journal:  MAGMA       Date:  2007-11-01       Impact factor: 2.310

7.  A neural network model of multisensory integration also accounts for unisensory integration in superior colliculus.

Authors:  Juan Carlos Alvarado; Benjamin A Rowland; Terrence R Stanford; Barry E Stein
Journal:  Brain Res       Date:  2008-04-09       Impact factor: 3.252

8.  Dynamic shim updating: a new approach towards optimized whole brain shimming.

Authors:  A M Blamire; D L Rothman; T Nixon
Journal:  Magn Reson Med       Date:  1996-07       Impact factor: 4.668

9.  Dynamic Shimming of the Human Brain at 7 Tesla.

Authors:  Christoph Juchem; Terence W Nixon; Piotr Diduch; Douglas L Rothman; Piotr Starewicz; Robin A de Graaf
Journal:  Concepts Magn Reson Part B Magn Reson Eng       Date:  2010-07-06       Impact factor: 1.176

10.  Developmental and regional changes in the neurochemical profile of the rat brain determined by in vivo 1H NMR spectroscopy.

Authors:  Ivan Tkác; Raghavendra Rao; Michael K Georgieff; Rolf Gruetter
Journal:  Magn Reson Med       Date:  2003-07       Impact factor: 4.668

View more
  10 in total

1.  The public multi-coil information (PUMCIN) policy.

Authors:  Christoph Juchem; Robin A de Graaf
Journal:  Magn Reson Med       Date:  2016-12-01       Impact factor: 4.668

2.  Dynamic multi-coil technique (DYNAMITE) shimming for echo-planar imaging of the human brain at 7 Tesla.

Authors:  Christoph Juchem; S Umesh Rudrapatna; Terence W Nixon; Robin A de Graaf
Journal:  Neuroimage       Date:  2014-11-08       Impact factor: 6.556

3.  Analysis of coil element distribution and dimension for matrix gradient coils.

Authors:  Hongyan He; Shufeng Wei; Huixian Wang; Wenhui Yang
Journal:  MAGMA       Date:  2022-06-11       Impact factor: 2.310

4.  Quantitative β mapping for calibrated fMRI.

Authors:  Christina Y Shu; Basavaraju G Sanganahalli; Daniel Coman; Peter Herman; Douglas L Rothman; Fahmeed Hyder
Journal:  Neuroimage       Date:  2015-11-24       Impact factor: 6.556

Review 5.  B0 magnetic field homogeneity and shimming for in vivo magnetic resonance spectroscopy.

Authors:  Christoph Juchem; Robin A de Graaf
Journal:  Anal Biochem       Date:  2016-06-09       Impact factor: 3.365

6.  Comparison of glomerular activity patterns by fMRI and wide-field calcium imaging: Implications for principles underlying odor mapping.

Authors:  Basavaraju G Sanganahalli; Michelle R Rebello; Peter Herman; Xenophon Papademetris; Gordon M Shepherd; Justus V Verhagen; Fahmeed Hyder
Journal:  Neuroimage       Date:  2015-11-26       Impact factor: 6.556

7.  Brain region and activity-dependent properties of M for calibrated fMRI.

Authors:  Christina Y Shu; Peter Herman; Daniel Coman; Basavaraju G Sanganahalli; Helen Wang; Christoph Juchem; Douglas L Rothman; Robin A de Graaf; Fahmeed Hyder
Journal:  Neuroimage       Date:  2015-10-31       Impact factor: 6.556

8.  DYNAmic Multi-coIl TEchnique (DYNAMITE) shimming of the rat brain at 11.7 T.

Authors:  Christoph Juchem; Peter Herman; Basavaraju G Sanganahalli; Peter B Brown; Scott McIntyre; Terence W Nixon; Dan Green; Fahmeed Hyder; Robin A de Graaf
Journal:  NMR Biomed       Date:  2014-05-17       Impact factor: 4.044

9.  Optimization of a quadrature birdcage coil for functional imaging of squirrel monkey brain at 9.4T.

Authors:  Ming Lu; Zhangyan Yang; Feng Wang; Gary Drake; Li Min Chen; John C Gore; Xinqiang Yan
Journal:  Magn Reson Imaging       Date:  2021-03-17       Impact factor: 3.130

10.  Orthonasal versus retronasal glomerular activity in rat olfactory bulb by fMRI.

Authors:  Basavaraju G Sanganahalli; Keeley L Baker; Garth J Thompson; Peter Herman; Gordon M Shepherd; Justus V Verhagen; Fahmeed Hyder
Journal:  Neuroimage       Date:  2020-02-20       Impact factor: 7.400

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.