Literature DB >> 24826173

2-((1E)-1-{2-[(2Z)-3,4-Diphenyl-2,3-di-hydro-1,3-thia-zol-2-yl-idene]hydrazin-1-yl-idene}eth-yl)pyridin-1-ium bromide monohydrate.

Mehmet Akkurt1, Joel T Mague2, Shaaban K Mohamed3, Alaa A Hassan4, Mustafa R Albayati5.   

Abstract

In the title compound, C22H19N4S(+)·Br(-)·H2O, the dihedral angles between the phenyl groups and the mean plane of the thia-zolyl-idene ring are 34.69 (13) and 64.27 (13)°, respectively, while that between the thia-zolyl-idene and pyridinium rings is 14.73 (13)°. In the crystal, zigzag chains of alternating bromide ions and water mol-ecules associate through O-H⋯Br inter-actions run in channels approximately parallel to the b axis. These chains help form parallel chains of cations through N-H⋯O, C-H⋯N and C-H⋯Br hydrogen bonds.

Entities:  

Year:  2014        PMID: 24826173      PMCID: PMC3998596          DOI: 10.1107/S1600536814006229

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of thia­zoles see: Zambon et al. (2008 ▶); Franklin et al. (2008 ▶); Karegoudar et al. (2008 ▶); Ochiai et al. (2003 ▶). For the biological significance of thia­zole scaffold compounds, see: Masquelin & Obrecht (2001 ▶); Hirai et al. (1980 ▶); Ali & El–Kazak (2010 ▶); Andreani et al. (1996 ▶, 2008 ▶); Budriesi et al. (2008 ▶); Walczynski et al. (2005 ▶). For similar structures, see: Mague et al. (2014 ▶); Mohamed et al. (2013a ▶,b ▶).

Experimental

Crystal data

C22H19N4SBr−·H2O M = 469.40 Orthorhombic, a = 21.8890 (17) Å b = 5.7384 (4) Å c = 16.6941 (13) Å V = 2096.9 (3) Å3 Z = 4 Mo Kα radiation μ = 2.08 mm−1 T = 150 K 0.19 × 0.08 × 0.06 mm

Data collection

Bruker SMART APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2013 ▶) T min = 0.69, T max = 0.89 35645 measured reflections 5394 independent reflections 4943 reflections with I > 2σ(I) R int = 0.046

Refinement

R[F 2 > 2σ(F 2)] = 0.027 wR(F 2) = 0.060 S = 1.05 5394 reflections 263 parameters 71 restraints H-atom parameters constrained Δρmax = 0.60 e Å−3 Δρmin = −0.18 e Å−3 Absolute structure: Flack parameter determined using 2220 quotients [(I +)−(I −)]/[(I +)+(I −)] (Parsons et al., 2013 ▶) Absolute structure parameter: 0.011 (4) Data collection: APEX2 (Bruker, 2013 ▶); cell refinement: SAINT (Bruker, 2013 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: DIAMOND (Brandenburg & Putz, 2012 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536814006229/xu5779sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814006229/xu5779Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814006229/xu5779Isup3.cml CCDC reference: 992782 Additional supporting information: crystallographic information; 3D view; checkCIF report
C22H19N4S+·Br·H2OF(000) = 960
Mr = 469.40Dx = 1.487 Mg m3
Orthorhombic, Pna21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2c -2nCell parameters from 9578 reflections
a = 21.8890 (17) Åθ = 2.2–28.6°
b = 5.7384 (4) ŵ = 2.08 mm1
c = 16.6941 (13) ÅT = 150 K
V = 2096.9 (3) Å3Column, orange
Z = 40.19 × 0.08 × 0.06 mm
Bruker SMART APEX CCD diffractometer5394 independent reflections
Radiation source: fine-focus sealed tube4943 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.046
Detector resolution: 8.3660 pixels mm-1θmax = 28.9°, θmin = 1.9°
φ and ω scansh = −29→29
Absorption correction: multi-scan (SADABS; Bruker, 2013)k = −7→7
Tmin = 0.69, Tmax = 0.89l = −22→21
35645 measured reflections
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.027w = 1/[σ2(Fo2) + (0.0251P)2] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.060(Δ/σ)max = 0.001
S = 1.05Δρmax = 0.60 e Å3
5394 reflectionsΔρmin = −0.18 e Å3
263 parametersAbsolute structure: Flack parameter determined using 2220 quotients [(I+)-(I-)]/[(I+)+(I-)] (Parsons et al., 2013)
71 restraintsAbsolute structure parameter: 0.011 (4)
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement on F2 for ALL reflections except those flagged by the user for potential systematic errors. Weighted R-factors wR and all goodnesses of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The observed criterion of F2 > σ(F2) is used only for calculating -R-factor-obs etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.61850 (3)0.09593 (11)0.85092 (4)0.0229 (2)
N10.51800 (10)0.2131 (3)0.78160 (14)0.0192 (6)
N20.57004 (10)−0.0860 (4)0.71385 (14)0.0217 (6)
N30.61924 (10)−0.2324 (4)0.72594 (15)0.0205 (6)
N40.71202 (10)−0.5216 (4)0.75415 (13)0.0213 (6)
C10.57446 (12)0.3189 (4)0.89084 (17)0.0230 (8)
C20.52293 (11)0.3602 (4)0.84921 (17)0.0206 (7)
C30.56577 (11)0.0597 (4)0.77396 (16)0.0194 (7)
C40.47512 (11)0.5271 (4)0.87249 (16)0.0205 (7)
C50.49212 (15)0.7326 (4)0.91199 (19)0.0265 (8)
C60.44860 (15)0.8887 (5)0.93869 (18)0.0310 (9)
C70.38714 (15)0.8462 (5)0.92659 (19)0.0314 (9)
C80.36944 (14)0.6413 (5)0.88887 (18)0.0281 (8)
C90.41249 (12)0.4834 (5)0.86216 (16)0.0236 (8)
C100.47325 (11)0.2338 (4)0.71884 (18)0.0194 (7)
C110.43411 (12)0.0479 (5)0.70314 (18)0.0259 (8)
C120.39293 (13)0.0661 (5)0.6403 (2)0.0337 (10)
C130.39056 (15)0.2685 (6)0.5947 (2)0.0362 (10)
C140.42835 (15)0.4519 (6)0.61191 (18)0.0351 (10)
C150.47038 (12)0.4360 (5)0.67431 (16)0.0247 (8)
C160.63290 (12)−0.3691 (5)0.66705 (16)0.0208 (7)
C170.60418 (15)−0.3685 (6)0.58542 (18)0.0324 (9)
C180.68144 (11)−0.5385 (4)0.68431 (15)0.0195 (7)
C190.69676 (14)−0.7211 (5)0.63304 (17)0.0252 (8)
C200.74126 (14)−0.8816 (5)0.65600 (18)0.0290 (9)
C210.77059 (14)−0.8562 (6)0.7283 (2)0.0302 (9)
C220.75536 (14)−0.6732 (5)0.77747 (19)0.0265 (9)
Br10.72775 (2)0.20153 (4)0.99633 (2)0.0276 (1)
O10.71716 (11)0.6961 (3)0.89932 (15)0.0354 (7)
H10.585600.403600.937500.0280*
H40.70300−0.405700.787500.0260*
H50.534200.765100.920500.0320*
H60.461001.026600.965600.0370*
H70.357400.955700.943900.0380*
H80.327200.609300.881400.0340*
H90.399600.344000.836500.0280*
H110.43560−0.089200.735000.0310*
H120.36630−0.059900.628400.0400*
H130.362600.279600.551400.0430*
H140.425900.590800.581100.0420*
H150.496800.562900.686100.0300*
H17A0.57680−0.234200.580600.0490*
H17B0.58080−0.512600.577900.0490*
H17C0.63620−0.358300.544500.0490*
H190.67700−0.736100.582700.0300*
H200.75130−1.008200.621800.0350*
H210.80110−0.964400.744200.0360*
H220.77530−0.653800.827600.0320*
H1A0.722700.578800.928500.0420*
H1B0.717700.819800.926200.0420*
U11U22U33U12U13U23
S10.0172 (3)0.0289 (3)0.0225 (3)0.0002 (3)−0.0039 (3)−0.0032 (3)
N10.0174 (11)0.0204 (9)0.0197 (12)−0.0007 (8)−0.0022 (8)−0.0024 (8)
N20.0199 (11)0.0255 (11)0.0198 (11)0.0030 (9)−0.0001 (9)−0.0031 (9)
N30.0171 (11)0.0236 (10)0.0207 (12)−0.0002 (9)−0.0010 (9)−0.0009 (9)
N40.0211 (10)0.0234 (10)0.0193 (12)0.0016 (9)0.0014 (9)−0.0043 (9)
C10.0231 (13)0.0260 (12)0.0198 (14)−0.0024 (10)−0.0016 (11)−0.0049 (10)
C20.0211 (12)0.0227 (11)0.0180 (13)−0.0039 (9)0.0015 (11)−0.0014 (10)
C30.0163 (12)0.0234 (12)0.0186 (13)−0.0019 (10)−0.0011 (10)0.0005 (10)
C40.0255 (13)0.0203 (11)0.0157 (13)−0.0004 (10)0.0031 (10)0.0003 (9)
C50.0332 (15)0.0244 (12)0.0218 (15)−0.0043 (12)0.0038 (12)−0.0016 (10)
C60.0455 (18)0.0220 (13)0.0254 (16)−0.0022 (12)0.0086 (14)−0.0026 (11)
C70.0420 (18)0.0276 (14)0.0247 (16)0.0114 (13)0.0082 (14)0.0017 (11)
C80.0266 (14)0.0366 (14)0.0210 (14)0.0056 (12)0.0026 (12)0.0015 (12)
C90.0255 (13)0.0264 (12)0.0190 (14)−0.0004 (11)−0.0011 (11)−0.0012 (11)
C100.0175 (12)0.0245 (12)0.0162 (13)0.0034 (10)−0.0018 (10)−0.0051 (10)
C110.0204 (13)0.0226 (12)0.0348 (17)0.0012 (11)−0.0028 (11)−0.0047 (11)
C120.0239 (14)0.0354 (16)0.0417 (19)0.0039 (13)−0.0080 (13)−0.0144 (14)
C130.0323 (16)0.0530 (19)0.0234 (16)0.0137 (15)−0.0102 (13)−0.0095 (14)
C140.0458 (19)0.0388 (17)0.0206 (15)0.0114 (15)−0.0038 (13)0.0031 (12)
C150.0284 (14)0.0272 (13)0.0186 (14)0.0025 (11)0.0008 (11)−0.0033 (10)
C160.0191 (12)0.0255 (12)0.0178 (13)−0.0011 (10)0.0011 (10)0.0002 (10)
C170.0326 (16)0.0433 (16)0.0212 (16)0.0109 (14)−0.0024 (12)−0.0033 (13)
C180.0188 (12)0.0229 (11)0.0167 (12)−0.0027 (10)0.0036 (10)0.0001 (10)
C190.0259 (14)0.0322 (14)0.0175 (14)0.0014 (11)0.0009 (11)−0.0057 (11)
C200.0333 (16)0.0281 (14)0.0256 (16)0.0050 (12)0.0066 (12)−0.0080 (12)
C210.0289 (16)0.0307 (14)0.0310 (17)0.0088 (12)0.0025 (12)−0.0009 (13)
C220.0240 (14)0.0310 (15)0.0245 (16)0.0035 (12)−0.0009 (12)−0.0034 (11)
Br10.0380 (2)0.0227 (1)0.0221 (1)−0.0011 (1)−0.0049 (1)−0.0042 (1)
O10.0582 (15)0.0222 (10)0.0257 (12)0.0051 (9)−0.0093 (10)−0.0045 (8)
S1—C11.735 (3)C14—C151.393 (4)
S1—C31.740 (3)C16—C181.469 (4)
O1—H1A0.8400C16—C171.501 (4)
O1—H1B0.8400C18—C191.394 (4)
N1—C21.414 (3)C19—C201.394 (4)
N1—C101.439 (4)C20—C211.375 (4)
N1—C31.373 (3)C21—C221.374 (5)
N2—C31.310 (3)C1—H10.9500
N2—N31.381 (3)C5—H50.9500
N3—C161.293 (4)C6—H60.9500
N4—C181.348 (3)C7—H70.9500
N4—C221.345 (4)C8—H80.9500
N4—H40.8900C9—H90.9500
C1—C21.346 (4)C11—H110.9500
C2—C41.471 (3)C12—H120.9500
C4—C91.404 (4)C13—H130.9500
C4—C51.401 (4)C14—H140.9500
C5—C61.382 (4)C15—H150.9500
C6—C71.382 (5)C17—H17C0.9800
C7—C81.389 (4)C17—H17A0.9800
C8—C91.381 (4)C17—H17B0.9800
C10—C111.393 (4)C19—H190.9500
C10—C151.379 (4)C20—H200.9500
C11—C121.387 (4)C21—H210.9500
C12—C131.390 (5)C22—H220.9500
C13—C141.369 (5)
C1—S1—C390.18 (12)C19—C20—C21119.8 (3)
H1A—O1—H1B111.00C20—C21—C22119.5 (3)
C2—N1—C10125.7 (2)N4—C22—C21119.5 (3)
C3—N1—C10120.3 (2)S1—C1—H1123.00
C2—N1—C3113.5 (2)C2—C1—H1123.00
N3—N2—C3109.4 (2)C6—C5—H5120.00
N2—N3—C16116.0 (2)C4—C5—H5120.00
C18—N4—C22123.7 (2)C5—C6—H6120.00
C22—N4—H4117.00C7—C6—H6120.00
C18—N4—H4119.00C8—C7—H7120.00
S1—C1—C2113.4 (2)C6—C7—H7120.00
C1—C2—C4125.1 (2)C9—C8—H8120.00
N1—C2—C1111.8 (2)C7—C8—H8120.00
N1—C2—C4123.1 (2)C4—C9—H9120.00
N1—C3—N2122.3 (2)C8—C9—H9120.00
S1—C3—N1111.11 (18)C10—C11—H11121.00
S1—C3—N2126.51 (19)C12—C11—H11121.00
C2—C4—C5118.9 (2)C13—C12—H12120.00
C2—C4—C9123.1 (2)C11—C12—H12120.00
C5—C4—C9117.9 (2)C12—C13—H13120.00
C4—C5—C6121.0 (3)C14—C13—H13120.00
C5—C6—C7120.6 (3)C15—C14—H14120.00
C6—C7—C8119.2 (3)C13—C14—H14120.00
C7—C8—C9120.8 (3)C10—C15—H15120.00
C4—C9—C8120.6 (3)C14—C15—H15120.00
C11—C10—C15121.0 (3)C16—C17—H17B109.00
N1—C10—C11119.5 (2)C16—C17—H17C109.00
N1—C10—C15119.5 (2)H17A—C17—H17B109.00
C10—C11—C12119.0 (3)H17A—C17—H17C109.00
C11—C12—C13120.1 (3)H17B—C17—H17C110.00
C12—C13—C14120.3 (3)C16—C17—H17A109.00
C13—C14—C15120.4 (3)C18—C19—H19120.00
C10—C15—C14119.2 (3)C20—C19—H19120.00
N3—C16—C17126.3 (3)C21—C20—H20120.00
N3—C16—C18114.8 (2)C19—C20—H20120.00
C17—C16—C18118.9 (2)C20—C21—H21120.00
C16—C18—C19123.5 (2)C22—C21—H21120.00
N4—C18—C19117.8 (2)N4—C22—H22120.00
N4—C18—C16118.8 (2)C21—C22—H22120.00
C18—C19—C20119.7 (3)
C3—S1—C1—C20.9 (2)C1—C2—C4—C533.9 (4)
C1—S1—C3—N1−0.31 (19)C1—C2—C4—C9−141.5 (3)
C1—S1—C3—N2177.4 (2)C2—C4—C5—C6−176.6 (3)
C3—N1—C2—C11.0 (3)C9—C4—C5—C6−1.0 (4)
C3—N1—C2—C4−175.7 (2)C2—C4—C9—C8176.7 (3)
C10—N1—C2—C1−170.8 (2)C5—C4—C9—C81.3 (4)
C10—N1—C2—C412.5 (4)C4—C5—C6—C7−0.4 (5)
C2—N1—C3—S1−0.3 (3)C5—C6—C7—C81.6 (5)
C2—N1—C3—N2−178.1 (2)C6—C7—C8—C9−1.3 (5)
C10—N1—C3—S1171.96 (17)C7—C8—C9—C4−0.1 (4)
C10—N1—C3—N2−5.8 (4)N1—C10—C11—C12−177.3 (3)
C2—N1—C10—C11−121.3 (3)C15—C10—C11—C121.7 (4)
C2—N1—C10—C1559.7 (4)N1—C10—C15—C14177.9 (3)
C3—N1—C10—C1167.5 (3)C11—C10—C15—C14−1.1 (4)
C3—N1—C10—C15−111.5 (3)C10—C11—C12—C13−0.8 (4)
C3—N2—N3—C16−172.8 (2)C11—C12—C13—C14−0.6 (5)
N3—N2—C3—S18.2 (3)C12—C13—C14—C151.2 (5)
N3—N2—C3—N1−174.4 (2)C13—C14—C15—C10−0.4 (4)
N2—N3—C16—C175.7 (4)N3—C16—C18—N4−7.6 (4)
N2—N3—C16—C18−174.3 (2)N3—C16—C18—C19170.7 (3)
C22—N4—C18—C16177.0 (3)C17—C16—C18—N4172.4 (2)
C22—N4—C18—C19−1.4 (4)C17—C16—C18—C19−9.3 (4)
C18—N4—C22—C210.5 (4)N4—C18—C19—C201.7 (4)
S1—C1—C2—N1−1.2 (3)C16—C18—C19—C20−176.6 (3)
S1—C1—C2—C4175.4 (2)C18—C19—C20—C21−1.3 (4)
N1—C2—C4—C5−149.9 (3)C19—C20—C21—C220.4 (5)
N1—C2—C4—C934.8 (4)C20—C21—C22—N40.0 (5)
D—H···AD—HH···AD···AD—H···A
O1—H1A···Br10.842.453.276 (2)170
O1—H1B···Br1i0.842.493.330 (2)174
N4—H4···O1ii0.891.982.729 (3)141
C15—H15···N2i0.952.623.566 (4)178
C20—H20···Br1iii0.952.723.645 (3)166
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1—H1A⋯Br10.842.453.276 (2)170
O1—H1B⋯Br1i 0.842.493.330 (2)174
N4—H4⋯O1ii 0.891.982.729 (3)141
C15—H15⋯N2i 0.952.623.566 (4)178
C20—H20⋯Br1iii 0.952.723.645 (3)166

Symmetry codes: (i) ; (ii) ; (iii) .

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8.  2-((1E)-1-{2-[(2Z)-4-(4-Bromo-phen-yl)-3-phenyl-2,3-di-hydro-1,3-thia-zol-2-yl-idene]hydrazin-1-yl-idene}eth-yl)pyridin-1-ium bromide monohydrate.

Authors:  Joel T Mague; Shaaban K Mohamed; Mehmet Akkurt; Ahmed T Abd El-Alaziz; Mustafa R Albayati
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-02-22

9.  Use of intensity quotients and differences in absolute structure refinement.

Authors:  Simon Parsons; Howard D Flack; Trixie Wagner
Journal:  Acta Crystallogr B Struct Sci Cryst Eng Mater       Date:  2013-05-17

10.  (1Z,2E)-1-(3,4-Diphenyl-2,3-di-hydro-1,3-thia-zol-2-yl-idene)-2-(1-p-tolyl-ethyl-idene)hydrazine.

Authors:  Shaaban K Mohamed; Joel T Mague; Mehmet Akkurt; Alaa A Hassan; Mustafa R Albayati
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-07-27
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  4 in total

1.  Crystal structure of (E)-1-(3-benzyl-5-phenyl-1,3-thia-zol-2-yl-idene)-2-[(E)-1,2,3,4-tetra-hydro-naphthalen-1-yl-idene]hydrazin-1-ium bromide.

Authors:  Shaaban K Mohamed; Sahar M I Elgarhy; Alaa A Hassan; Güneş Demirtaş; Joel T Mague; Youssef Ramli
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2021-03-23

2.  (2E)-4-(4-Bromo-phen-yl)-2-{2-[(1E)-cyclo-pentyl-idene]hydrazin-1-yl-idene}-3-phenyl-2,3-di-hydro-1,3-thia-zole.

Authors:  Joel T Mague; Shaaban K Mohamed; Mehmet Akkurt; Alaa A Hassan; Mustafa R Albayati
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-05-17

3.  Crystal structure of 4-((1E)-1-{(2Z)-2-[4-(4-bromo-phen-yl)-3-phenyl-2,3-di-hydro-1,3-thia-zol-2-yl-idene]hydrazin-1-yl-idene}eth-yl)phenol hemihydrate.

Authors:  Joel T Mague; Mehmet Akkurt; Shaaban K Mohamed; Alaa A Hassan; Mustafa R Albayati
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-09-24

4.  1-[(Cyclo-hexyl-idene)amino]-3-(prop-2-en-1-yl)thio-urea.

Authors:  Shaaban K Mohamed; Joel T Mague; Mehmet Akkurt; Alaa A Hassan; Mustafa R Albayati
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-06-25
  4 in total

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