Literature DB >> 24940250

(2E)-4-(4-Bromo-phen-yl)-2-{2-[(1E)-cyclo-pentyl-idene]hydrazin-1-yl-idene}-3-phenyl-2,3-di-hydro-1,3-thia-zole.

Joel T Mague1, Shaaban K Mohamed2, Mehmet Akkurt3, Alaa A Hassan4, Mustafa R Albayati5.   

Abstract

In the title compound, C20H18BrN3S, the cyclo-pentane ring adopts a half-chair conformation. The 4-bromo-phenyl and phenyl rings make dihedral angles of 34.6 (1) and 68.52 (6)°, respectively, with the di-hydro-thia-zole ring. In the crystal, the mol-ecules pack in sheets approximately parallel to (101) which are formed by weak C-H⋯Br inter-actions.

Entities:  

Year:  2014        PMID: 24940250      PMCID: PMC4051030          DOI: 10.1107/S1600536814010897

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For variuos medicinal applications of thia­zole scaffold compounds, see: Mahajan et al. (2008 ▶); Abbs et al. (2008 ▶); Chowki et al. (2008 ▶); Karabasanagouda et al. (2008 ▶); Basavaraja et al. (2008 ▶); Bhusari et al. (2000 ▶); Basawaraj et al. (2005 ▶). For similar structures, see: Akkurt et al. (2014 ▶); Mague et al. (2014 ▶); Mohamed et al. (2013 ▶). For ring conformations, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C20H18BrN3S M = 412.34 Monoclinic, a = 12.5079 (3) Å b = 5.5728 (1) Å c = 25.3761 (6) Å β = 96.8480 (11)° V = 1756.20 (7) Å3 Z = 4 Cu Kα radiation μ = 4.35 mm−1 T = 100 K 0.10 × 0.08 × 0.02 mm

Data collection

Bruker D8 VENTURE PHOTON 100 CMOS diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2013 ▶) T min = 0.80, T max = 0.92 12815 measured reflections 3409 independent reflections 2960 reflections with I > 2σ(I) R int = 0.033

Refinement

R[F 2 > 2σ(F 2)] = 0.030 wR(F 2) = 0.072 S = 1.06 3409 reflections 230 parameters 1 restraint H-atom parameters constrained Δρmax = 0.89 e Å−3 Δρmin = −0.26 e Å−3 Data collection: APEX2 (Bruker, 2013 ▶); cell refinement: SAINT (Bruker, 2013 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXT (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg & Putz, 2012 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536814010897/qm2107sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814010897/qm2107Isup2.hkl CCDC reference: 1002511 Additional supporting information: crystallographic information; 3D view; checkCIF report
C20H18BrN3SF(000) = 840
Mr = 412.34Dx = 1.560 Mg m3
Monoclinic, P21/cCu Kα radiation, λ = 1.54178 Å
a = 12.5079 (3) ÅCell parameters from 8908 reflections
b = 5.5728 (1) Åθ = 3.5–72.3°
c = 25.3761 (6) ŵ = 4.35 mm1
β = 96.8480 (11)°T = 100 K
V = 1756.20 (7) Å3Plate, yellow
Z = 40.10 × 0.08 × 0.02 mm
Bruker D8 VENTURE PHOTON 100 CMOS diffractometer3409 independent reflections
Radiation source: INCOATEC IµS micro–focus source2960 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.033
Detector resolution: 10.4167 pixels mm-1θmax = 72.3°, θmin = 3.5°
ω scansh = −14→15
Absorption correction: multi-scan (SADABS; Bruker, 2013)k = −6→6
Tmin = 0.80, Tmax = 0.92l = −31→29
12815 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.030Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.072H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0367P)2 + 0.942P] where P = (Fo2 + 2Fc2)/3
3409 reflections(Δ/σ)max = 0.004
230 parametersΔρmax = 0.89 e Å3
1 restraintΔρmin = −0.26 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes)are estimated using the full covariance matrix. The cell e.s.d.'s are takeninto account individually in the estimation of e.s.d.'s in distances, anglesand torsion angles; correlations between e.s.d.'s in cell parameters are onlyused when they are defined by crystal symmetry. An approximate (isotropic)treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR andgoodness of fit S are based on F2, conventional R-factors R are basedon F, with F set to zero for negative F2. The threshold expression ofF2 > σ(F2) is used only for calculating R-factors(gt) etc. and isnot relevant to the choice of reflections for refinement. R-factors basedon F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. H-atoms were placed incalculated positions (C—H = 0.95 - 0.99 Å) and included as ridingcontributions with isotropic displacement parameters 1.2 times thoseof the attached carbon atoms. At the conclusion of refinement with allatoms at unit occupancy, the largest difference peak appeared in thevicinity of Br1. Refinement of this as a second component of a disorderof Br1 led to improvement in the results and a more realistic value forU(iso) for Br1. The geometry associated with the minor component (Br1A)suggests that there is a small amount of "whole molecule" disorder butsince the refined occupancy of Br1A is only 0.02, there is not enoughinformation from the final difference map to reliably position theremainder of the minor component.
xyzUiso*/UeqOcc. (<1)
Br10.85490 (2)−0.31880 (7)0.43991 (2)0.02218 (11)0.982 (1)
Br1A0.8563 (12)−0.201 (4)0.4313 (4)0.02218 (11)0.0182 (11)
S10.94129 (4)0.58669 (10)0.71625 (2)0.01954 (13)
N10.77696 (15)0.4902 (3)0.64754 (7)0.0186 (4)
N20.74281 (16)0.7923 (4)0.70865 (8)0.0219 (4)
N30.80239 (15)0.9247 (4)0.75009 (7)0.0219 (4)
C10.85169 (18)−0.1224 (4)0.50103 (9)0.0188 (4)
C20.91130 (18)−0.1876 (4)0.54836 (9)0.0206 (5)
H20.9528−0.33080.55070.025*
C30.90938 (18)−0.0397 (4)0.59242 (9)0.0192 (4)
H30.9493−0.08420.62520.023*
C40.84970 (17)0.1732 (4)0.58934 (8)0.0173 (4)
C50.79033 (19)0.2330 (4)0.54094 (9)0.0197 (5)
H50.74920.37670.53820.024*
C60.79050 (19)0.0856 (4)0.49681 (9)0.0209 (5)
H60.74920.12670.46420.025*
C70.86033 (18)0.3344 (4)0.63585 (9)0.0180 (4)
C80.95119 (19)0.3650 (4)0.66889 (9)0.0194 (5)
H81.01480.27440.66660.023*
C90.80684 (18)0.6404 (4)0.69039 (8)0.0183 (4)
C100.66773 (18)0.4827 (4)0.62245 (8)0.0187 (4)
C110.6062 (2)0.2806 (4)0.62887 (9)0.0225 (5)
H110.63440.15170.65080.027*
C120.5018 (2)0.2708 (4)0.60235 (10)0.0265 (5)
H120.45800.13430.60650.032*
C130.46162 (19)0.4581 (5)0.57017 (10)0.0278 (5)
H130.39080.44900.55200.033*
C140.5245 (2)0.6597 (4)0.56423 (9)0.0254 (5)
H140.49680.78790.54200.030*
C150.62813 (19)0.6735 (4)0.59085 (9)0.0219 (5)
H150.67120.81170.58740.026*
C160.74531 (18)1.0603 (4)0.77618 (9)0.0202 (5)
C170.79575 (19)1.2288 (4)0.81892 (9)0.0211 (5)
H17A0.83081.36620.80320.025*
H17B0.84991.14410.84390.025*
C180.70068 (19)1.3126 (5)0.84697 (10)0.0270 (5)
H18A0.71321.47630.86160.032*
H18B0.68821.20200.87620.032*
C190.6054 (2)1.3094 (5)0.80314 (10)0.0282 (5)
H19A0.60501.45490.78070.034*
H19B0.53631.29940.81840.034*
C200.62414 (19)1.0838 (5)0.77104 (9)0.0248 (5)
H20A0.59110.94140.78590.030*
H20B0.59381.10320.73340.030*
U11U22U33U12U13U23
Br10.02681 (14)0.0192 (2)0.02079 (13)0.00088 (11)0.00395 (9)−0.00472 (11)
Br1A0.02681 (14)0.0192 (2)0.02079 (13)0.00088 (11)0.00395 (9)−0.00472 (11)
S10.0204 (3)0.0212 (3)0.0163 (3)0.0003 (2)−0.0011 (2)−0.00170 (19)
N10.0182 (9)0.0184 (9)0.0186 (9)0.0008 (7)0.0001 (7)−0.0038 (7)
N20.0215 (10)0.0251 (10)0.0185 (9)0.0000 (8)−0.0002 (8)−0.0061 (8)
N30.0217 (10)0.0249 (10)0.0182 (9)−0.0002 (8)−0.0008 (8)−0.0037 (8)
C10.0206 (11)0.0158 (10)0.0205 (11)−0.0037 (9)0.0044 (9)−0.0035 (8)
C20.0203 (11)0.0176 (10)0.0240 (11)0.0003 (9)0.0029 (9)0.0018 (9)
C30.0193 (11)0.0187 (10)0.0195 (11)0.0000 (9)0.0015 (9)0.0034 (8)
C40.0168 (10)0.0182 (10)0.0167 (10)−0.0021 (9)0.0017 (8)0.0008 (8)
C50.0225 (11)0.0167 (10)0.0198 (11)0.0035 (9)0.0017 (9)0.0004 (8)
C60.0237 (12)0.0210 (11)0.0172 (11)0.0020 (9)−0.0005 (9)0.0007 (8)
C70.0207 (11)0.0160 (10)0.0173 (10)0.0006 (9)0.0027 (8)0.0021 (8)
C80.0221 (11)0.0181 (10)0.0179 (11)0.0011 (9)0.0020 (9)−0.0007 (8)
C90.0201 (11)0.0183 (10)0.0157 (10)−0.0020 (9)−0.0012 (9)0.0006 (8)
C100.0197 (11)0.0194 (11)0.0171 (10)−0.0006 (9)0.0028 (9)−0.0041 (8)
C110.0264 (12)0.0206 (11)0.0212 (11)−0.0027 (10)0.0059 (9)−0.0005 (9)
C120.0235 (12)0.0260 (12)0.0313 (13)−0.0069 (10)0.0089 (10)−0.0064 (10)
C130.0181 (11)0.0361 (14)0.0286 (13)0.0007 (11)0.0001 (10)−0.0095 (10)
C140.0250 (12)0.0270 (12)0.0228 (11)0.0070 (10)−0.0022 (10)−0.0020 (9)
C150.0226 (12)0.0196 (11)0.0236 (11)−0.0012 (9)0.0028 (9)−0.0022 (9)
C160.0217 (11)0.0207 (11)0.0176 (11)−0.0015 (9)0.0002 (9)−0.0004 (8)
C170.0220 (11)0.0236 (11)0.0174 (11)−0.0024 (9)0.0015 (9)−0.0029 (8)
C180.0245 (12)0.0329 (13)0.0233 (12)0.0004 (11)0.0024 (10)−0.0082 (10)
C190.0240 (12)0.0339 (13)0.0264 (12)0.0056 (11)0.0017 (10)−0.0062 (10)
C200.0221 (12)0.0299 (13)0.0222 (11)−0.0009 (10)0.0014 (9)−0.0056 (9)
Br1—C11.903 (2)C10—C151.387 (3)
Br1A—C11.830 (8)C11—C121.397 (4)
S1—C81.738 (2)C11—H110.9500
S1—C91.756 (2)C12—C131.382 (4)
N1—C91.388 (3)C12—H120.9500
N1—C71.415 (3)C13—C141.390 (4)
N1—C101.437 (3)C13—H130.9500
N2—C91.289 (3)C14—C151.390 (3)
N2—N31.421 (3)C14—H140.9500
N3—C161.277 (3)C15—H150.9500
C1—C21.385 (3)C16—C201.511 (3)
C1—C61.386 (3)C16—C171.514 (3)
C2—C31.391 (3)C17—C181.530 (3)
C2—H20.9500C17—H17A0.9900
C3—C41.399 (3)C17—H17B0.9900
C3—H30.9500C18—C191.530 (3)
C4—C51.398 (3)C18—H18A0.9900
C4—C71.476 (3)C18—H18B0.9900
C5—C61.389 (3)C19—C201.531 (3)
C5—H50.9500C19—H19A0.9900
C6—H60.9500C19—H19B0.9900
C7—C81.340 (3)C20—H20A0.9900
C8—H80.9500C20—H20B0.9900
C10—C111.384 (3)
C8—S1—C990.38 (11)C12—C11—H11120.8
C9—N1—C7113.44 (18)C13—C12—C11120.5 (2)
C9—N1—C10121.16 (18)C13—C12—H12119.7
C7—N1—C10125.08 (18)C11—C12—H12119.7
C9—N2—N3108.28 (19)C12—C13—C14120.2 (2)
C16—N3—N2114.49 (19)C12—C13—H13119.9
C2—C1—C6121.5 (2)C14—C13—H13119.9
C2—C1—Br1A134.4 (6)C15—C14—C13119.9 (2)
C6—C1—Br1A102.0 (7)C15—C14—H14120.0
C2—C1—Br1119.64 (17)C13—C14—H14120.0
C6—C1—Br1118.90 (17)C10—C15—C14119.1 (2)
C1—C2—C3118.9 (2)C10—C15—H15120.4
C1—C2—H2120.6C14—C15—H15120.4
C3—C2—H2120.6N3—C16—C20128.6 (2)
C2—C3—C4121.2 (2)N3—C16—C17121.8 (2)
C2—C3—H3119.4C20—C16—C17109.62 (19)
C4—C3—H3119.4C16—C17—C18104.01 (19)
C5—C4—C3118.4 (2)C16—C17—H17A111.0
C5—C4—C7123.0 (2)C18—C17—H17A111.0
C3—C4—C7118.35 (19)C16—C17—H17B111.0
C6—C5—C4121.0 (2)C18—C17—H17B111.0
C6—C5—H5119.5H17A—C17—H17B109.0
C4—C5—H5119.5C17—C18—C19103.86 (19)
C1—C6—C5119.1 (2)C17—C18—H18A111.0
C1—C6—H6120.5C19—C18—H18A111.0
C5—C6—H6120.5C17—C18—H18B111.0
C8—C7—N1112.5 (2)C19—C18—H18B111.0
C8—C7—C4124.5 (2)H18A—C18—H18B109.0
N1—C7—C4122.84 (19)C18—C19—C20103.9 (2)
C7—C8—S1113.45 (17)C18—C19—H19A111.0
C7—C8—H8123.3C20—C19—H19A111.0
S1—C8—H8123.3C18—C19—H19B111.0
N2—C9—N1123.8 (2)C20—C19—H19B111.0
N2—C9—S1125.86 (17)H19A—C19—H19B109.0
N1—C9—S1110.27 (16)C16—C20—C19103.95 (19)
C11—C10—C15121.8 (2)C16—C20—H20A111.0
C11—C10—N1118.9 (2)C19—C20—H20A111.0
C15—C10—N1119.3 (2)C16—C20—H20B111.0
C10—C11—C12118.4 (2)C19—C20—H20B111.0
C10—C11—H11120.8H20A—C20—H20B109.0
C9—N2—N3—C16−171.4 (2)C10—N1—C9—N2−4.5 (3)
C6—C1—C2—C3−0.1 (3)C7—N1—C9—S10.2 (2)
Br1A—C1—C2—C3159.7 (10)C10—N1—C9—S1174.06 (16)
Br1—C1—C2—C3178.96 (16)C8—S1—C9—N2178.2 (2)
C1—C2—C3—C4−0.8 (3)C8—S1—C9—N1−0.31 (17)
C2—C3—C4—C51.0 (3)C9—N1—C10—C11−109.5 (2)
C2—C3—C4—C7−173.6 (2)C7—N1—C10—C1163.6 (3)
C3—C4—C5—C6−0.2 (3)C9—N1—C10—C1573.0 (3)
C7—C4—C5—C6174.1 (2)C7—N1—C10—C15−113.9 (2)
C2—C1—C6—C50.9 (3)C15—C10—C11—C120.3 (3)
Br1A—C1—C6—C5−164.5 (6)N1—C10—C11—C12−177.2 (2)
Br1—C1—C6—C5−178.20 (17)C10—C11—C12—C130.6 (3)
C4—C5—C6—C1−0.7 (3)C11—C12—C13—C14−0.6 (4)
C9—N1—C7—C80.0 (3)C12—C13—C14—C15−0.2 (4)
C10—N1—C7—C8−173.5 (2)C11—C10—C15—C14−1.1 (3)
C9—N1—C7—C4−174.9 (2)N1—C10—C15—C14176.4 (2)
C10—N1—C7—C411.6 (3)C13—C14—C15—C101.0 (3)
C5—C4—C7—C8−140.5 (2)N2—N3—C16—C204.6 (3)
C3—C4—C7—C833.8 (3)N2—N3—C16—C17−175.20 (19)
C5—C4—C7—N133.8 (3)N3—C16—C17—C18−168.4 (2)
C3—C4—C7—N1−151.9 (2)C20—C16—C17—C1811.8 (3)
N1—C7—C8—S1−0.3 (2)C16—C17—C18—C19−31.0 (2)
C4—C7—C8—S1174.50 (17)C17—C18—C19—C2038.9 (3)
C9—S1—C8—C70.35 (18)N3—C16—C20—C19−167.8 (2)
N3—N2—C9—N1−176.3 (2)C17—C16—C20—C1912.1 (3)
N3—N2—C9—S15.4 (3)C18—C19—C20—C16−31.2 (2)
C7—N1—C9—N2−178.3 (2)
D—H···AD—HH···AD···AD—H···A
C17—H17B···Br1i0.993.033.828 (2)138
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C17—H17B⋯Br1i 0.993.033.828 (2)138

Symmetry code: (i) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  2-((1E)-1-{2-[(2Z)-4-(4-Bromo-phen-yl)-3-phenyl-2,3-di-hydro-1,3-thia-zol-2-yl-idene]hydrazin-1-yl-idene}eth-yl)pyridin-1-ium bromide monohydrate.

Authors:  Joel T Mague; Shaaban K Mohamed; Mehmet Akkurt; Ahmed T Abd El-Alaziz; Mustafa R Albayati
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-02-22

3.  (2E)-4-(4-Bromo-phen-yl)-2-{(2Z)-[1-(4-methyl-phen-yl)ethyl-idene]hydrazinyl-idene}-3-phenyl-2,3-di-hydro-1,3-thia-zole.

Authors:  Shaaban K Mohamed; Mehmet Akkurt; Joel T Mague; Alaa A Hassan; Mustafa R Albayati
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-09-18

4.  2-((1E)-1-{2-[(2Z)-3,4-Diphenyl-2,3-di-hydro-1,3-thia-zol-2-yl-idene]hydrazin-1-yl-idene}eth-yl)pyridin-1-ium bromide monohydrate.

Authors:  Mehmet Akkurt; Joel T Mague; Shaaban K Mohamed; Alaa A Hassan; Mustafa R Albayati
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-03-26
  4 in total

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