Literature DB >> 25484708

Crystal structure of 4-((1E)-1-{(2Z)-2-[4-(4-bromo-phen-yl)-3-phenyl-2,3-di-hydro-1,3-thia-zol-2-yl-idene]hydrazin-1-yl-idene}eth-yl)phenol hemihydrate.

Joel T Mague1, Mehmet Akkurt2, Shaaban K Mohamed3, Alaa A Hassan4, Mustafa R Albayati5.   

Abstract

In the title compound, C23H18BrN3OS·0.5H2O, the bromo-phenyl, phenyl and phenol rings make dihedral angles of 46.5 (1), 66.78 (8) and 15.4 (2)°, respectively, with the mean squares plane of the thia-zol-idene ring. In the crystal, the lattice water mol-ecule is hydrogen bonded to the phenol group and makes a weaker O-H⋯N connection to an inversion-related mol-ecule, forming a ring while weak pairwise C-H⋯S inter-actions involving inversion-related mol-ecules form a second ring. Both these motifs result in the formation of two-dimensional networks lying parallel to (10-1).

Entities:  

Keywords:  C—H⋯S inter­actions; crystal structure; medicinal applications; phenol; thia­zole scaffold compounds

Year:  2014        PMID: 25484708      PMCID: PMC4257180          DOI: 10.1107/S1600536814019473

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the wide spectrum of medicinal applications of thia­zole scaffold compounds, see: Pattan et al. (2009 ▶); Sharma et al. (2009 ▶); Argyropoulou et al. (2009 ▶); Trautman & Longe (1948 ▶); Surray (1949 ▶); Bhattacharya et al. (2005 ▶); Alemagna et al. (1968 ▶); Spector et al. (1998 ▶); Karade et al. (2008 ▶). For a related structure, see: Akkurt et al. (2014 ▶).

Experimental

Crystal data

C23H18BrN3OS·0.5H2O M = 473.38 Triclinic, a = 8.485 (2) Å b = 10.336 (2) Å c = 12.057 (3) Å α = 80.515 (3)° β = 88.008 (3)° γ = 86.249 (4)° V = 1040.3 (4) Å3 Z = 2 Mo Kα radiation μ = 2.10 mm−1 T = 150 K 0.27 × 0.23 × 0.07 mm

Data collection

Bruker SMART APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2013 ▶) T min = 0.51, T max = 0.86 18957 measured reflections 5211 independent reflections 3834 reflections with I > 2σ(I) R int = 0.049

Refinement

R[F 2 > 2σ(F 2)] = 0.046 wR(F 2) = 0.126 S = 1.02 5211 reflections 273 parameters H-atom parameters constrained Δρmax = 0.85 e Å−3 Δρmin = −0.32 e Å−3

Data collection: APEX2 (Bruker, 2013 ▶); cell refinement: SAINT (Bruker, 2013 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXT (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg & Putz, 2012 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536814019473/qm2108sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814019473/qm2108Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814019473/qm2108Isup3.cml Click here for additional data file. . DOI: 10.1107/S1600536814019473/qm2108fig1.tif The title compound with numbering scheme and 50% probability displacement ellipsoids. Click here for additional data file. b . DOI: 10.1107/S1600536814019473/qm2108fig2.tif Packing viewed down the b axis showing the rings formed by the O—H⋯O (red), O—H⋯N (blue) and C—H⋯S (black) inter­actions. CCDC reference: 1021529 Additional supporting information: crystallographic information; 3D view; checkCIF report
C23H18BrN3OS·0.5H2OZ = 2
Mr = 473.38F(000) = 482
Triclinic, P1Dx = 1.511 Mg m3
a = 8.485 (2) ÅMo Kα radiation, λ = 0.71073 Å
b = 10.336 (2) ÅCell parameters from 7895 reflections
c = 12.057 (3) Åθ = 2.4–28.4°
α = 80.515 (3)°µ = 2.10 mm1
β = 88.008 (3)°T = 150 K
γ = 86.249 (4)°Plate, orange
V = 1040.3 (4) Å30.27 × 0.23 × 0.07 mm
Bruker SMART APEX CCD diffractometer5211 independent reflections
Radiation source: fine-focus sealed tube3834 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.049
Detector resolution: 8.3660 pixels mm-1θmax = 28.5°, θmin = 2.0°
φ and ω scansh = −11→11
Absorption correction: multi-scan (SADABS; Bruker, 2013)k = −13→13
Tmin = 0.51, Tmax = 0.86l = −16→16
18957 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.046Hydrogen site location: mixed
wR(F2) = 0.126H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.062P)2 + 0.5209P] where P = (Fo2 + 2Fc2)/3
5211 reflections(Δ/σ)max < 0.001
273 parametersΔρmax = 0.85 e Å3
0 restraintsΔρmin = −0.32 e Å3
Experimental. The diffraction data were obtained from 3 sets of 400 frames, each of width 0.5° in ω, collected at φ = 0.00, 90.00 and 180.00° and 2 sets of 800 frames, each of width 0.45° in φ, collected at ω = -30.00 and 210.00°. The scan time was 15 sec/frame.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. H-atoms attached to carbon were placed in calculated positions (C—H = 0.95 - 0.98 Å) while those attached to oxygen were placed in locations derived from a difference map and their coordinates adjusted to give O—H = 0.84 Å. All were included as riding contributions with isotropic displacement parameters 1.2 - 1.5 times those of the attached atoms.
xyzUiso*/UeqOcc. (<1)
Br1−0.12028 (5)0.13286 (3)−0.19996 (3)0.05610 (15)
S10.40464 (9)0.58630 (7)0.18323 (6)0.03452 (17)
O10.9721 (3)0.8848 (3)0.5879 (3)0.0730 (8)
H11.03940.85620.63680.110*
N10.3970 (3)0.3403 (2)0.16873 (18)0.0301 (5)
N20.5690 (3)0.3796 (2)0.3070 (2)0.0369 (5)
N30.6250 (3)0.4875 (2)0.34845 (19)0.0354 (5)
C10.1997 (3)0.3384 (3)0.0175 (2)0.0290 (5)
C20.1835 (3)0.3850 (3)−0.0973 (2)0.0347 (6)
H20.23820.4593−0.13130.042*
C30.0891 (3)0.3245 (3)−0.1624 (2)0.0370 (6)
H30.07980.3562−0.24060.044*
C40.0090 (3)0.2178 (3)−0.1119 (2)0.0374 (6)
C50.0177 (3)0.1714 (3)0.0027 (2)0.0357 (6)
H5−0.04170.09990.03660.043*
C60.1144 (3)0.2311 (3)0.0667 (2)0.0343 (6)
H60.12310.19900.14490.041*
C70.2959 (3)0.4075 (3)0.0851 (2)0.0296 (5)
C80.2881 (3)0.5384 (3)0.0827 (2)0.0336 (6)
H80.22560.59850.03140.040*
C90.4677 (3)0.4211 (3)0.2289 (2)0.0319 (6)
C100.4530 (3)0.2040 (3)0.1771 (2)0.0304 (5)
C110.4261 (3)0.1177 (3)0.2750 (3)0.0396 (7)
H110.36730.14640.33590.048*
C120.4863 (4)−0.0122 (3)0.2834 (3)0.0457 (8)
H120.4673−0.07270.35010.055*
C130.5730 (4)−0.0532 (3)0.1955 (3)0.0460 (8)
H130.6136−0.14190.20180.055*
C140.6010 (4)0.0336 (3)0.0988 (3)0.0426 (7)
H140.66190.00520.03880.051*
C150.5403 (3)0.1627 (3)0.0889 (2)0.0369 (6)
H150.55860.22270.02170.044*
C160.6881 (3)0.4600 (3)0.4462 (2)0.0321 (6)
C170.6960 (4)0.3259 (3)0.5167 (2)0.0383 (6)
H17A0.64670.26430.47690.058*
H17B0.63990.32960.58860.058*
H17C0.80670.29630.53050.058*
C180.7578 (3)0.5707 (3)0.4874 (2)0.0332 (6)
C190.7384 (4)0.6989 (3)0.4292 (3)0.0410 (7)
H190.67450.71520.36460.049*
C200.8087 (4)0.8027 (3)0.4621 (3)0.0483 (8)
H200.79390.88860.42010.058*
C210.9007 (4)0.7810 (3)0.5567 (3)0.0483 (8)
C220.9198 (4)0.6557 (3)0.6184 (3)0.0455 (7)
H220.98150.64060.68400.055*
C230.8486 (3)0.5521 (3)0.5839 (2)0.0379 (6)
H230.86200.46660.62700.045*
O21.1835 (4)0.8167 (5)0.7301 (4)0.0451 (11)0.5
H2A1.24510.81440.67430.054*0.5
H2B1.19140.74040.76680.054*0.5
U11U22U33U12U13U23
Br10.0777 (3)0.0379 (2)0.0543 (2)−0.00352 (16)−0.03883 (18)−0.00462 (14)
S10.0432 (4)0.0256 (3)0.0347 (4)−0.0034 (3)−0.0061 (3)−0.0030 (3)
O10.0642 (17)0.0498 (16)0.114 (3)−0.0017 (13)−0.0168 (16)−0.0361 (16)
N10.0385 (12)0.0249 (11)0.0263 (11)−0.0011 (9)−0.0074 (9)−0.0010 (8)
N20.0451 (13)0.0337 (13)0.0319 (12)−0.0062 (10)−0.0093 (10)−0.0017 (10)
N30.0430 (13)0.0340 (13)0.0296 (12)−0.0060 (10)−0.0082 (10)−0.0032 (9)
C10.0294 (12)0.0261 (13)0.0301 (13)0.0052 (10)−0.0044 (10)−0.0028 (10)
C20.0343 (14)0.0335 (15)0.0332 (14)0.0016 (11)−0.0020 (11)0.0018 (11)
C30.0408 (15)0.0381 (16)0.0303 (14)0.0058 (12)−0.0102 (12)−0.0014 (11)
C40.0424 (15)0.0304 (15)0.0404 (15)0.0074 (12)−0.0170 (12)−0.0091 (12)
C50.0437 (15)0.0242 (13)0.0386 (15)−0.0005 (11)−0.0093 (12)−0.0019 (11)
C60.0433 (15)0.0288 (14)0.0294 (13)−0.0003 (11)−0.0054 (11)−0.0008 (10)
C70.0319 (13)0.0263 (13)0.0292 (13)−0.0002 (10)−0.0031 (10)−0.0003 (10)
C80.0357 (14)0.0272 (14)0.0367 (15)0.0005 (11)−0.0076 (11)−0.0007 (11)
C90.0386 (14)0.0285 (13)0.0278 (13)−0.0039 (11)−0.0016 (11)−0.0012 (10)
C100.0319 (13)0.0246 (13)0.0338 (14)−0.0020 (10)−0.0096 (11)0.0004 (10)
C110.0404 (15)0.0365 (16)0.0384 (16)0.0003 (12)0.0003 (13)0.0029 (12)
C120.0494 (17)0.0319 (16)0.0494 (18)0.0003 (13)−0.0087 (14)0.0127 (13)
C130.0480 (17)0.0315 (16)0.058 (2)0.0078 (13)−0.0207 (15)−0.0061 (14)
C140.0451 (17)0.0420 (17)0.0427 (17)0.0022 (13)−0.0085 (13)−0.0134 (13)
C150.0424 (15)0.0361 (15)0.0322 (14)−0.0024 (12)−0.0048 (12)−0.0047 (11)
C160.0351 (13)0.0347 (15)0.0245 (13)0.0028 (11)−0.0026 (10)−0.0005 (10)
C170.0488 (16)0.0353 (15)0.0297 (14)0.0007 (13)−0.0087 (12)−0.0013 (11)
C180.0321 (13)0.0376 (15)0.0294 (13)0.0011 (11)−0.0031 (11)−0.0047 (11)
C190.0455 (16)0.0392 (17)0.0382 (16)0.0023 (13)−0.0087 (13)−0.0063 (13)
C200.0512 (18)0.0372 (17)0.057 (2)0.0005 (14)−0.0099 (15)−0.0074 (14)
C210.0410 (16)0.0482 (19)0.061 (2)0.0012 (14)−0.0070 (15)−0.0239 (16)
C220.0374 (15)0.058 (2)0.0430 (17)0.0024 (14)−0.0106 (13)−0.0152 (15)
C230.0360 (14)0.0442 (17)0.0332 (15)0.0004 (12)−0.0038 (12)−0.0057 (12)
O20.0275 (19)0.060 (3)0.057 (3)0.0017 (18)−0.0138 (18)−0.035 (2)
Br1—C41.902 (3)C11—C121.394 (4)
S1—C81.743 (3)C11—H110.9500
S1—C91.760 (3)C12—C131.377 (5)
O1—C211.376 (4)C12—H120.9500
O1—H10.8400C13—C141.372 (5)
N1—C91.371 (3)C13—H130.9500
N1—C71.409 (3)C14—C151.387 (4)
N1—C101.446 (3)C14—H140.9500
N2—C91.297 (4)C15—H150.9500
N2—N31.411 (3)C16—C181.484 (4)
N3—C161.293 (3)C16—C171.500 (4)
C1—C21.397 (4)C17—H17A0.9800
C1—C61.401 (4)C17—H17B0.9800
C1—C71.467 (4)C17—H17C0.9800
C2—C31.385 (4)C18—C191.396 (4)
C2—H20.9500C18—C231.397 (4)
C3—C41.377 (4)C19—C201.380 (5)
C3—H30.9500C19—H190.9500
C4—C51.388 (4)C20—C211.384 (5)
C5—C61.385 (4)C20—H200.9500
C5—H50.9500C21—C221.386 (5)
C6—H60.9500C22—C231.391 (4)
C7—C81.346 (4)C22—H220.9500
C8—H80.9500C23—H230.9500
C10—C111.379 (4)O2—H2A0.8397
C10—C151.384 (4)O2—H2B0.8384
C8—S1—C990.06 (13)C13—C12—C11120.4 (3)
C21—O1—H1109.5C13—C12—H12119.8
C9—N1—C7114.0 (2)C11—C12—H12119.8
C9—N1—C10119.9 (2)C14—C13—C12120.2 (3)
C7—N1—C10124.7 (2)C14—C13—H13119.9
C9—N2—N3109.8 (2)C12—C13—H13119.9
C16—N3—N2115.3 (2)C13—C14—C15120.0 (3)
C2—C1—C6118.6 (2)C13—C14—H14120.0
C2—C1—C7119.8 (2)C15—C14—H14120.0
C6—C1—C7121.6 (2)C10—C15—C14119.8 (3)
C3—C2—C1121.1 (3)C10—C15—H15120.1
C3—C2—H2119.5C14—C15—H15120.1
C1—C2—H2119.5N3—C16—C18116.0 (2)
C4—C3—C2118.9 (3)N3—C16—C17124.2 (3)
C4—C3—H3120.6C18—C16—C17119.8 (2)
C2—C3—H3120.6C16—C17—H17A109.5
C3—C4—C5121.8 (3)C16—C17—H17B109.5
C3—C4—Br1119.5 (2)H17A—C17—H17B109.5
C5—C4—Br1118.7 (2)C16—C17—H17C109.5
C6—C5—C4118.9 (3)H17A—C17—H17C109.5
C6—C5—H5120.6H17B—C17—H17C109.5
C4—C5—H5120.6C19—C18—C23116.8 (3)
C5—C6—C1120.8 (3)C19—C18—C16121.0 (2)
C5—C6—H6119.6C23—C18—C16122.2 (3)
C1—C6—H6119.6C20—C19—C18122.3 (3)
C8—C7—N1112.4 (2)C20—C19—H19118.9
C8—C7—C1125.0 (2)C18—C19—H19118.9
N1—C7—C1122.4 (2)C19—C20—C21119.7 (3)
C7—C8—S1113.1 (2)C19—C20—H20120.2
C7—C8—H8123.5C21—C20—H20120.2
S1—C8—H8123.5O1—C21—C20119.2 (3)
N2—C9—N1123.9 (2)O1—C21—C22121.0 (3)
N2—C9—S1125.6 (2)C20—C21—C22119.8 (3)
N1—C9—S1110.52 (19)C21—C22—C23119.9 (3)
C11—C10—C15120.5 (3)C21—C22—H22120.1
C11—C10—N1119.8 (2)C23—C22—H22120.1
C15—C10—N1119.6 (2)C22—C23—C18121.5 (3)
C10—C11—C12119.1 (3)C22—C23—H23119.2
C10—C11—H11120.5C18—C23—H23119.2
C12—C11—H11120.5H2A—O2—H2B104.8
C9—N2—N3—C16160.3 (2)C8—S1—C9—N1−1.1 (2)
C6—C1—C2—C3−1.9 (4)C9—N1—C10—C1170.7 (3)
C7—C1—C2—C3−177.8 (2)C7—N1—C10—C11−123.7 (3)
C1—C2—C3—C40.8 (4)C9—N1—C10—C15−105.9 (3)
C2—C3—C4—C51.5 (4)C7—N1—C10—C1559.7 (4)
C2—C3—C4—Br1−179.6 (2)C15—C10—C11—C12−0.8 (4)
C3—C4—C5—C6−2.5 (4)N1—C10—C11—C12−177.5 (3)
Br1—C4—C5—C6178.6 (2)C10—C11—C12—C130.8 (5)
C4—C5—C6—C11.3 (4)C11—C12—C13—C140.0 (5)
C2—C1—C6—C50.8 (4)C12—C13—C14—C15−0.7 (5)
C7—C1—C6—C5176.6 (2)C11—C10—C15—C140.1 (4)
C9—N1—C7—C8−0.9 (3)N1—C10—C15—C14176.8 (3)
C10—N1—C7—C8−167.2 (2)C13—C14—C15—C100.7 (4)
C9—N1—C7—C1−175.1 (2)N2—N3—C16—C18175.8 (2)
C10—N1—C7—C118.5 (4)N2—N3—C16—C17−3.3 (4)
C2—C1—C7—C846.9 (4)N3—C16—C18—C197.3 (4)
C6—C1—C7—C8−128.9 (3)C17—C16—C18—C19−173.5 (3)
C2—C1—C7—N1−139.6 (3)N3—C16—C18—C23−171.0 (3)
C6—C1—C7—N144.6 (4)C17—C16—C18—C238.1 (4)
N1—C7—C8—S10.0 (3)C23—C18—C19—C201.9 (4)
C1—C7—C8—S1174.1 (2)C16—C18—C19—C20−176.5 (3)
C9—S1—C8—C70.6 (2)C18—C19—C20—C21−0.7 (5)
N3—N2—C9—N1177.1 (2)C19—C20—C21—O1179.1 (3)
N3—N2—C9—S1−1.5 (3)C19—C20—C21—C22−0.9 (5)
C7—N1—C9—N2−177.5 (3)O1—C21—C22—C23−178.9 (3)
C10—N1—C9—N2−10.4 (4)C20—C21—C22—C231.0 (5)
C7—N1—C9—S11.3 (3)C21—C22—C23—C180.3 (5)
C10—N1—C9—S1168.41 (19)C19—C18—C23—C22−1.7 (4)
C8—S1—C9—N2177.7 (3)C16—C18—C23—C22176.7 (3)
D—H···AD—HH···AD···AD—H···A
O1—H1···O20.841.672.511 (5)173
O2—H2A···N2i0.842.452.898 (5)114
C17—H17B···S1ii0.983.023.925 (3)154
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1—H1⋯O20.841.672.511 (5)173
O2—H2A⋯N2i 0.842.452.898 (5)114
C17—H17B⋯S1ii 0.983.023.925 (3)154

Symmetry codes: (i) ; (ii) .

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