| Literature DB >> 24826152 |
A Sankar1, S Ambalatharasu1, G Peramaiyan1, G Chakkaravarthi2, R Kanagadurai1.
Abstract
In the title 1:1 adduct, C6H5NO3·C6H5NO2, both mol-ecules are almost planar (r.m.s. deviations for the non-H atoms = 0.027 and 0.023 Å for 4-nitro-phenol and 2-carboxyl-atopyridinium, respectively). The pyridine mol-ecule crystallizes as a zwitterion (nominal proton transfer from the carb-oxy-lic acid group to the N atom in the ring). In the crystal, inversion dimers of the zwitterions linked by pairs of N-H⋯O hydrogen bonds generate R 2 (2)(10) loops; two 4-nitro-phenol mol-ecules link to the dimer by O-H⋯O hydrogen bonds, generating a four-molecule aggregate. These are linked by C-H⋯O inter-actions, forming a three-dimensional network.Entities:
Year: 2014 PMID: 24826152 PMCID: PMC3998544 DOI: 10.1107/S1600536814005650
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C6H5NO3·C6H5NO2 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 4728 reflections | |
| θ = 2.9–27.7° | |
| µ = 0.12 mm−1 | |
| α = 101.727 (3)° | |
| β = 92.191 (2)° | Block, colourless |
| γ = 104.758 (4)° | 0.32 × 0.24 × 0.20 mm |
| Bruker Kappa APEXII CCD diffractometer | 3486 independent reflections |
| Radiation source: fine-focus sealed tube | 2327 reflections with |
| Graphite monochromator | |
| ω and φ scan | θmax = 30.4°, θmin = 2.9° |
| Absorption correction: multi-scan ( | |
| 13952 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3486 reflections | (Δ/σ)max < 0.001 |
| 180 parameters | Δρmax = 0.14 e Å−3 |
| 2 restraints | Δρmin = −0.24 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| C1 | 0.3865 (2) | 0.38442 (18) | 0.19001 (9) | 0.0451 (3) | |
| C2 | 0.2381 (2) | 0.2646 (2) | 0.11160 (10) | 0.0498 (3) | |
| H2A | 0.0853 | 0.2230 | 0.1187 | 0.060* | |
| C3 | 0.3152 (2) | 0.20783 (19) | 0.02422 (9) | 0.0474 (3) | |
| H3 | 0.2155 | 0.1288 | −0.0281 | 0.057* | |
| C4 | 0.5424 (2) | 0.26918 (17) | 0.01464 (9) | 0.0414 (3) | |
| C5 | 0.6929 (2) | 0.38640 (18) | 0.09160 (9) | 0.0459 (3) | |
| H5 | 0.8455 | 0.4274 | 0.0840 | 0.055* | |
| C6 | 0.6153 (2) | 0.44171 (18) | 0.17923 (9) | 0.0474 (3) | |
| H6 | 0.7161 | 0.5179 | 0.2317 | 0.057* | |
| C7 | 0.1820 (2) | 0.19479 (19) | 0.45093 (8) | 0.0429 (3) | |
| C8 | −0.1051 (2) | 0.1161 (2) | 0.32506 (10) | 0.0512 (3) | |
| H8 | −0.2284 | 0.1462 | 0.2981 | 0.061* | |
| C9 | −0.0352 (3) | −0.0443 (2) | 0.27958 (10) | 0.0550 (3) | |
| H9 | −0.1090 | −0.1236 | 0.2211 | 0.066* | |
| C10 | 0.1445 (3) | −0.0868 (2) | 0.32101 (10) | 0.0589 (4) | |
| H10 | 0.1930 | −0.1968 | 0.2912 | 0.071* | |
| C11 | 0.2543 (3) | 0.0336 (2) | 0.40725 (9) | 0.0529 (3) | |
| H11 | 0.3772 | 0.0051 | 0.4356 | 0.063* | |
| C12 | 0.2879 (2) | 0.3378 (2) | 0.54544 (9) | 0.0477 (3) | |
| N1 | 0.6252 (2) | 0.21159 (16) | −0.07787 (8) | 0.0501 (3) | |
| N2 | 0.00405 (19) | 0.22997 (16) | 0.40848 (7) | 0.0452 (3) | |
| O1 | 0.29906 (19) | 0.44091 (17) | 0.27221 (8) | 0.0619 (3) | |
| O2 | 0.4895 (2) | 0.11237 (18) | −0.14600 (7) | 0.0689 (3) | |
| O3 | 0.82814 (19) | 0.26305 (17) | −0.08431 (8) | 0.0714 (3) | |
| O4 | 0.2047 (2) | 0.47818 (17) | 0.57395 (7) | 0.0701 (3) | |
| O5 | 0.44519 (18) | 0.29715 (16) | 0.58610 (7) | 0.0666 (3) | |
| H2 | −0.039 (3) | 0.3351 (18) | 0.4342 (11) | 0.066 (5)* | |
| H1 | 0.400 (3) | 0.524 (2) | 0.3119 (12) | 0.085 (6)* |
| C1 | 0.0519 (7) | 0.0382 (6) | 0.0449 (6) | 0.0139 (5) | −0.0003 (5) | 0.0071 (5) |
| C2 | 0.0394 (6) | 0.0514 (7) | 0.0550 (7) | 0.0101 (5) | −0.0036 (5) | 0.0075 (6) |
| C3 | 0.0460 (7) | 0.0433 (6) | 0.0476 (7) | 0.0104 (5) | −0.0116 (5) | 0.0030 (5) |
| C4 | 0.0478 (7) | 0.0346 (6) | 0.0427 (6) | 0.0150 (5) | −0.0034 (5) | 0.0066 (5) |
| C5 | 0.0404 (6) | 0.0410 (6) | 0.0525 (7) | 0.0091 (5) | −0.0041 (5) | 0.0054 (5) |
| C6 | 0.0476 (7) | 0.0409 (6) | 0.0469 (6) | 0.0078 (5) | −0.0091 (5) | 0.0019 (5) |
| C7 | 0.0500 (7) | 0.0472 (7) | 0.0334 (5) | 0.0184 (5) | 0.0041 (5) | 0.0067 (5) |
| C8 | 0.0550 (8) | 0.0496 (7) | 0.0459 (7) | 0.0160 (6) | −0.0074 (6) | 0.0034 (5) |
| C9 | 0.0678 (9) | 0.0471 (7) | 0.0443 (7) | 0.0161 (6) | −0.0051 (6) | −0.0021 (5) |
| C10 | 0.0792 (10) | 0.0547 (8) | 0.0458 (7) | 0.0334 (7) | 0.0042 (7) | −0.0016 (6) |
| C11 | 0.0617 (8) | 0.0616 (8) | 0.0412 (6) | 0.0335 (7) | 0.0005 (6) | 0.0039 (6) |
| C12 | 0.0572 (8) | 0.0530 (7) | 0.0350 (5) | 0.0238 (6) | 0.0008 (5) | 0.0034 (5) |
| N1 | 0.0602 (7) | 0.0435 (6) | 0.0477 (6) | 0.0192 (5) | −0.0009 (5) | 0.0071 (5) |
| N2 | 0.0544 (6) | 0.0435 (6) | 0.0386 (5) | 0.0206 (5) | −0.0001 (4) | 0.0024 (4) |
| O1 | 0.0611 (7) | 0.0658 (7) | 0.0513 (6) | 0.0141 (5) | 0.0066 (5) | −0.0004 (5) |
| O2 | 0.0762 (7) | 0.0787 (7) | 0.0460 (6) | 0.0263 (6) | −0.0106 (5) | −0.0033 (5) |
| O3 | 0.0627 (7) | 0.0734 (7) | 0.0691 (7) | 0.0119 (6) | 0.0161 (5) | 0.0013 (6) |
| O4 | 0.0938 (8) | 0.0667 (7) | 0.0520 (6) | 0.0483 (6) | −0.0173 (5) | −0.0117 (5) |
| O5 | 0.0763 (7) | 0.0785 (7) | 0.0471 (5) | 0.0448 (6) | −0.0138 (5) | −0.0082 (5) |
| C1—O1 | 1.3363 (16) | C8—N2 | 1.3349 (16) |
| C1—C6 | 1.3902 (19) | C8—C9 | 1.3626 (19) |
| C1—C2 | 1.3934 (18) | C8—H8 | 0.9300 |
| C2—C3 | 1.3679 (19) | C9—C10 | 1.364 (2) |
| C2—H2A | 0.9300 | C9—H9 | 0.9300 |
| C3—C4 | 1.3796 (18) | C10—C11 | 1.3801 (19) |
| C3—H3 | 0.9300 | C10—H10 | 0.9300 |
| C4—C5 | 1.3813 (17) | C11—H11 | 0.9300 |
| C4—N1 | 1.4482 (17) | C12—O4 | 1.2325 (16) |
| C5—C6 | 1.3705 (19) | C12—O5 | 1.2356 (15) |
| C5—H5 | 0.9300 | N1—O2 | 1.2222 (15) |
| C6—H6 | 0.9300 | N1—O3 | 1.2252 (15) |
| C7—N2 | 1.3352 (16) | N2—H2 | 0.866 (9) |
| C7—C11 | 1.3676 (18) | O1—H1 | 0.838 (9) |
| C7—C12 | 1.5156 (17) | ||
| O1—C1—C6 | 123.25 (12) | N2—C8—H8 | 120.1 |
| O1—C1—C2 | 117.49 (12) | C9—C8—H8 | 120.1 |
| C6—C1—C2 | 119.25 (12) | C8—C9—C10 | 119.09 (13) |
| C3—C2—C1 | 120.57 (12) | C8—C9—H9 | 120.5 |
| C3—C2—H2A | 119.7 | C10—C9—H9 | 120.5 |
| C1—C2—H2A | 119.7 | C9—C10—C11 | 119.88 (13) |
| C2—C3—C4 | 119.23 (12) | C9—C10—H10 | 120.1 |
| C2—C3—H3 | 120.4 | C11—C10—H10 | 120.1 |
| C4—C3—H3 | 120.4 | C7—C11—C10 | 119.84 (13) |
| C3—C4—C5 | 121.20 (12) | C7—C11—H11 | 120.1 |
| C3—C4—N1 | 119.62 (11) | C10—C11—H11 | 120.1 |
| C5—C4—N1 | 119.18 (12) | O4—C12—O5 | 127.49 (12) |
| C6—C5—C4 | 119.40 (12) | O4—C12—C7 | 116.64 (11) |
| C6—C5—H5 | 120.3 | O5—C12—C7 | 115.84 (11) |
| C4—C5—H5 | 120.3 | O2—N1—O3 | 122.83 (12) |
| C5—C6—C1 | 120.31 (12) | O2—N1—C4 | 118.51 (12) |
| C5—C6—H6 | 119.8 | O3—N1—C4 | 118.65 (11) |
| C1—C6—H6 | 119.8 | C8—N2—C7 | 123.02 (11) |
| N2—C7—C11 | 118.38 (11) | C8—N2—H2 | 117.9 (11) |
| N2—C7—C12 | 116.75 (11) | C7—N2—H2 | 119.0 (11) |
| C11—C7—C12 | 124.87 (12) | C1—O1—H1 | 109.5 (14) |
| N2—C8—C9 | 119.78 (13) | ||
| O1—C1—C2—C3 | 177.46 (13) | C12—C7—C11—C10 | 179.96 (13) |
| C6—C1—C2—C3 | −1.60 (19) | C9—C10—C11—C7 | 0.2 (2) |
| C1—C2—C3—C4 | 0.5 (2) | N2—C7—C12—O4 | −1.96 (19) |
| C2—C3—C4—C5 | 0.09 (19) | C11—C7—C12—O4 | 178.60 (14) |
| C2—C3—C4—N1 | −179.33 (11) | N2—C7—C12—O5 | 176.51 (12) |
| C3—C4—C5—C6 | 0.42 (19) | C11—C7—C12—O5 | −2.9 (2) |
| N1—C4—C5—C6 | 179.84 (11) | C3—C4—N1—O2 | 1.36 (18) |
| C4—C5—C6—C1 | −1.53 (19) | C5—C4—N1—O2 | −178.07 (11) |
| O1—C1—C6—C5 | −176.89 (12) | C3—C4—N1—O3 | −178.10 (12) |
| C2—C1—C6—C5 | 2.11 (19) | C5—C4—N1—O3 | 2.47 (18) |
| N2—C8—C9—C10 | 0.7 (2) | C9—C8—N2—C7 | 0.0 (2) |
| C8—C9—C10—C11 | −0.8 (2) | C11—C7—N2—C8 | −0.6 (2) |
| N2—C7—C11—C10 | 0.5 (2) | C12—C7—N2—C8 | 179.91 (12) |
| H··· | ||||
| O1—H1···O5i | 0.84 (1) | 1.77 (1) | 2.5929 (15) | 165 (2) |
| N2—H2···O4ii | 0.87 (1) | 1.88 (1) | 2.6693 (15) | 151 (2) |
| C5—H5···O3iii | 0.93 | 2.56 | 3.3570 (17) | 143 |
| C9—H9···O2iv | 0.93 | 2.57 | 3.2009 (18) | 126 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1—H1⋯O5i | 0.84 (1) | 1.77 (1) | 2.5929 (15) | 165 (2) |
| N2—H2⋯O4ii | 0.87 (1) | 1.88 (1) | 2.6693 (15) | 151 (2) |
| C5—H5⋯O3iii | 0.93 | 2.56 | 3.3570 (17) | 143 |
| C9—H9⋯O2iv | 0.93 | 2.57 | 3.2009 (18) | 126 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .