Literature DB >> 24826152

2-Carboxyl-atopyridinium-4-nitro-phenol (1/1).

A Sankar1, S Ambalatharasu1, G Peramaiyan1, G Chakkaravarthi2, R Kanagadurai1.   

Abstract

In the title 1:1 adduct, C6H5NO3·C6H5NO2, both mol-ecules are almost planar (r.m.s. deviations for the non-H atoms = 0.027 and 0.023 Å for 4-nitro-phenol and 2-carboxyl-atopyridinium, respectively). The pyridine mol-ecule crystallizes as a zwitterion (nominal proton transfer from the carb-oxy-lic acid group to the N atom in the ring). In the crystal, inversion dimers of the zwitterions linked by pairs of N-H⋯O hydrogen bonds generate R 2 (2)(10) loops; two 4-nitro-phenol mol-ecules link to the dimer by O-H⋯O hydrogen bonds, generating a four-molecule aggregate. These are linked by C-H⋯O inter-actions, forming a three-dimensional network.

Entities:  

Year:  2014        PMID: 24826152      PMCID: PMC3998544          DOI: 10.1107/S1600536814005650

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a related structure, see: Pandi et al. (2012 ▶).

Experimental

Crystal data

C6H5NO3·C6H5NO2 M = 262.22 Triclinic, a = 6.1743 (4) Å b = 7.0512 (3) Å c = 14.2222 (8) Å α = 101.727 (3)° β = 92.191 (2)° γ = 104.758 (4)° V = 583.60 (6) Å3 Z = 2 Mo Kα radiation μ = 0.12 mm−1 T = 295 K 0.32 × 0.24 × 0.20 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2004 ▶) T min = 0.963, T max = 0.977 13952 measured reflections 3486 independent reflections 2327 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.130 S = 1.04 3486 reflections 180 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.14 e Å−3 Δρmin = −0.24 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536814005650/hb7209sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814005650/hb7209Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814005650/hb7209Isup3.cml CCDC reference: 991427 Additional supporting information: crystallographic information; 3D view; checkCIF report
C6H5NO3·C6H5NO2Z = 2
Mr = 262.22F(000) = 272
Triclinic, P1Dx = 1.492 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.1743 (4) ÅCell parameters from 4728 reflections
b = 7.0512 (3) Åθ = 2.9–27.7°
c = 14.2222 (8) ŵ = 0.12 mm1
α = 101.727 (3)°T = 295 K
β = 92.191 (2)°Block, colourless
γ = 104.758 (4)°0.32 × 0.24 × 0.20 mm
V = 583.60 (6) Å3
Bruker Kappa APEXII CCD diffractometer3486 independent reflections
Radiation source: fine-focus sealed tube2327 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.028
ω and φ scanθmax = 30.4°, θmin = 2.9°
Absorption correction: multi-scan (SADABS; Bruker, 2004)h = −8→8
Tmin = 0.963, Tmax = 0.977k = −10→9
13952 measured reflectionsl = −17→20
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.045Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.130H atoms treated by a mixture of independent and constrained refinement
S = 1.04w = 1/[σ2(Fo2) + (0.0602P)2 + 0.0686P] where P = (Fo2 + 2Fc2)/3
3486 reflections(Δ/σ)max < 0.001
180 parametersΔρmax = 0.14 e Å3
2 restraintsΔρmin = −0.24 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/Ueq
C10.3865 (2)0.38442 (18)0.19001 (9)0.0451 (3)
C20.2381 (2)0.2646 (2)0.11160 (10)0.0498 (3)
H2A0.08530.22300.11870.060*
C30.3152 (2)0.20783 (19)0.02422 (9)0.0474 (3)
H30.21550.1288−0.02810.057*
C40.5424 (2)0.26918 (17)0.01464 (9)0.0414 (3)
C50.6929 (2)0.38640 (18)0.09160 (9)0.0459 (3)
H50.84550.42740.08400.055*
C60.6153 (2)0.44171 (18)0.17923 (9)0.0474 (3)
H60.71610.51790.23170.057*
C70.1820 (2)0.19479 (19)0.45093 (8)0.0429 (3)
C8−0.1051 (2)0.1161 (2)0.32506 (10)0.0512 (3)
H8−0.22840.14620.29810.061*
C9−0.0352 (3)−0.0443 (2)0.27958 (10)0.0550 (3)
H9−0.1090−0.12360.22110.066*
C100.1445 (3)−0.0868 (2)0.32101 (10)0.0589 (4)
H100.1930−0.19680.29120.071*
C110.2543 (3)0.0336 (2)0.40725 (9)0.0529 (3)
H110.37720.00510.43560.063*
C120.2879 (2)0.3378 (2)0.54544 (9)0.0477 (3)
N10.6252 (2)0.21159 (16)−0.07787 (8)0.0501 (3)
N20.00405 (19)0.22997 (16)0.40848 (7)0.0452 (3)
O10.29906 (19)0.44091 (17)0.27221 (8)0.0619 (3)
O20.4895 (2)0.11237 (18)−0.14600 (7)0.0689 (3)
O30.82814 (19)0.26305 (17)−0.08431 (8)0.0714 (3)
O40.2047 (2)0.47818 (17)0.57395 (7)0.0701 (3)
O50.44519 (18)0.29715 (16)0.58610 (7)0.0666 (3)
H2−0.039 (3)0.3351 (18)0.4342 (11)0.066 (5)*
H10.400 (3)0.524 (2)0.3119 (12)0.085 (6)*
U11U22U33U12U13U23
C10.0519 (7)0.0382 (6)0.0449 (6)0.0139 (5)−0.0003 (5)0.0071 (5)
C20.0394 (6)0.0514 (7)0.0550 (7)0.0101 (5)−0.0036 (5)0.0075 (6)
C30.0460 (7)0.0433 (6)0.0476 (7)0.0104 (5)−0.0116 (5)0.0030 (5)
C40.0478 (7)0.0346 (6)0.0427 (6)0.0150 (5)−0.0034 (5)0.0066 (5)
C50.0404 (6)0.0410 (6)0.0525 (7)0.0091 (5)−0.0041 (5)0.0054 (5)
C60.0476 (7)0.0409 (6)0.0469 (6)0.0078 (5)−0.0091 (5)0.0019 (5)
C70.0500 (7)0.0472 (7)0.0334 (5)0.0184 (5)0.0041 (5)0.0067 (5)
C80.0550 (8)0.0496 (7)0.0459 (7)0.0160 (6)−0.0074 (6)0.0034 (5)
C90.0678 (9)0.0471 (7)0.0443 (7)0.0161 (6)−0.0051 (6)−0.0021 (5)
C100.0792 (10)0.0547 (8)0.0458 (7)0.0334 (7)0.0042 (7)−0.0016 (6)
C110.0617 (8)0.0616 (8)0.0412 (6)0.0335 (7)0.0005 (6)0.0039 (6)
C120.0572 (8)0.0530 (7)0.0350 (5)0.0238 (6)0.0008 (5)0.0034 (5)
N10.0602 (7)0.0435 (6)0.0477 (6)0.0192 (5)−0.0009 (5)0.0071 (5)
N20.0544 (6)0.0435 (6)0.0386 (5)0.0206 (5)−0.0001 (4)0.0024 (4)
O10.0611 (7)0.0658 (7)0.0513 (6)0.0141 (5)0.0066 (5)−0.0004 (5)
O20.0762 (7)0.0787 (7)0.0460 (6)0.0263 (6)−0.0106 (5)−0.0033 (5)
O30.0627 (7)0.0734 (7)0.0691 (7)0.0119 (6)0.0161 (5)0.0013 (6)
O40.0938 (8)0.0667 (7)0.0520 (6)0.0483 (6)−0.0173 (5)−0.0117 (5)
O50.0763 (7)0.0785 (7)0.0471 (5)0.0448 (6)−0.0138 (5)−0.0082 (5)
C1—O11.3363 (16)C8—N21.3349 (16)
C1—C61.3902 (19)C8—C91.3626 (19)
C1—C21.3934 (18)C8—H80.9300
C2—C31.3679 (19)C9—C101.364 (2)
C2—H2A0.9300C9—H90.9300
C3—C41.3796 (18)C10—C111.3801 (19)
C3—H30.9300C10—H100.9300
C4—C51.3813 (17)C11—H110.9300
C4—N11.4482 (17)C12—O41.2325 (16)
C5—C61.3705 (19)C12—O51.2356 (15)
C5—H50.9300N1—O21.2222 (15)
C6—H60.9300N1—O31.2252 (15)
C7—N21.3352 (16)N2—H20.866 (9)
C7—C111.3676 (18)O1—H10.838 (9)
C7—C121.5156 (17)
O1—C1—C6123.25 (12)N2—C8—H8120.1
O1—C1—C2117.49 (12)C9—C8—H8120.1
C6—C1—C2119.25 (12)C8—C9—C10119.09 (13)
C3—C2—C1120.57 (12)C8—C9—H9120.5
C3—C2—H2A119.7C10—C9—H9120.5
C1—C2—H2A119.7C9—C10—C11119.88 (13)
C2—C3—C4119.23 (12)C9—C10—H10120.1
C2—C3—H3120.4C11—C10—H10120.1
C4—C3—H3120.4C7—C11—C10119.84 (13)
C3—C4—C5121.20 (12)C7—C11—H11120.1
C3—C4—N1119.62 (11)C10—C11—H11120.1
C5—C4—N1119.18 (12)O4—C12—O5127.49 (12)
C6—C5—C4119.40 (12)O4—C12—C7116.64 (11)
C6—C5—H5120.3O5—C12—C7115.84 (11)
C4—C5—H5120.3O2—N1—O3122.83 (12)
C5—C6—C1120.31 (12)O2—N1—C4118.51 (12)
C5—C6—H6119.8O3—N1—C4118.65 (11)
C1—C6—H6119.8C8—N2—C7123.02 (11)
N2—C7—C11118.38 (11)C8—N2—H2117.9 (11)
N2—C7—C12116.75 (11)C7—N2—H2119.0 (11)
C11—C7—C12124.87 (12)C1—O1—H1109.5 (14)
N2—C8—C9119.78 (13)
O1—C1—C2—C3177.46 (13)C12—C7—C11—C10179.96 (13)
C6—C1—C2—C3−1.60 (19)C9—C10—C11—C70.2 (2)
C1—C2—C3—C40.5 (2)N2—C7—C12—O4−1.96 (19)
C2—C3—C4—C50.09 (19)C11—C7—C12—O4178.60 (14)
C2—C3—C4—N1−179.33 (11)N2—C7—C12—O5176.51 (12)
C3—C4—C5—C60.42 (19)C11—C7—C12—O5−2.9 (2)
N1—C4—C5—C6179.84 (11)C3—C4—N1—O21.36 (18)
C4—C5—C6—C1−1.53 (19)C5—C4—N1—O2−178.07 (11)
O1—C1—C6—C5−176.89 (12)C3—C4—N1—O3−178.10 (12)
C2—C1—C6—C52.11 (19)C5—C4—N1—O32.47 (18)
N2—C8—C9—C100.7 (2)C9—C8—N2—C70.0 (2)
C8—C9—C10—C11−0.8 (2)C11—C7—N2—C8−0.6 (2)
N2—C7—C11—C100.5 (2)C12—C7—N2—C8179.91 (12)
D—H···AD—HH···AD···AD—H···A
O1—H1···O5i0.84 (1)1.77 (1)2.5929 (15)165 (2)
N2—H2···O4ii0.87 (1)1.88 (1)2.6693 (15)151 (2)
C5—H5···O3iii0.932.563.3570 (17)143
C9—H9···O2iv0.932.573.2009 (18)126
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1—H1⋯O5i 0.84 (1)1.77 (1)2.5929 (15)165 (2)
N2—H2⋯O4ii 0.87 (1)1.88 (1)2.6693 (15)151 (2)
C5—H5⋯O3iii 0.932.563.3570 (17)143
C9—H9⋯O2iv 0.932.573.2009 (18)126

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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