Literature DB >> 24815373

An investigation of the potential of DIP-STR markers for DNA mixture analyses.

G Cereda1, A Biedermann2, D Hall3, F Taroni2.   

Abstract

The genetic characterization of unbalanced mixed stains remains an important area where improvement is imperative. In fact, using the standard tools of forensic DNA profiling (i.e., STR markers), the profile of the minor contributor in mixed DNA stains cannot be successfully detected if its quantitative share of DNA is less than 10% of the mixed trace. This is due to the fact that the major contributor's profile "masks" that of the minor contributor. Besides known remedies to this problem, such as Y-STR analysis, a new compound genetic marker that consists of a Deletion/Insertion Polymorphism (DIP) linked to a Short Tandem Repeat (STR) polymorphism, has recently been developed and proposed. These novel markers are called DIP-STR markers. This paper compares, from a statistical and forensic perspective, the potential usefulness of these novel DIP-STR markers (i) with traditional STR markers in cases of moderately unbalanced mixtures, and (ii) with Y-STR markers in cases of female-male mixtures. This is done through a comparison of the distribution of 100,000 likelihood ratio values obtained using each method on simulated mixtures. This procedure is performed assuming, in turn, the prosecution's and the defence's point of view.
Copyright © 2014 Elsevier Ireland Ltd. All rights reserved.

Entities:  

Keywords:  Deletion/Insertion Polymorphism; Graphical models; Likelihood ratio; Unbalanced DNA mixture

Mesh:

Substances:

Year:  2014        PMID: 24815373     DOI: 10.1016/j.fsigen.2014.04.001

Source DB:  PubMed          Journal:  Forensic Sci Int Genet        ISSN: 1872-4973            Impact factor:   4.882


  8 in total

Review 1.  Separation/extraction, detection, and interpretation of DNA mixtures in forensic science (review).

Authors:  Ruiyang Tao; Shouyu Wang; Jiashuo Zhang; Jingyi Zhang; Zihao Yang; Xiang Sheng; Yiping Hou; Suhua Zhang; Chengtao Li
Journal:  Int J Legal Med       Date:  2018-05-25       Impact factor: 2.686

2.  Inferring biogeographic ancestry with compound markers of slow and fast evolving polymorphisms.

Authors:  Amandine Moriot; Carla Santos; Ana Freire-Aradas; Christopher Phillips; Diana Hall
Journal:  Eur J Hum Genet       Date:  2018-07-11       Impact factor: 4.246

3.  A Nonparametric Bayesian Approach to the Rare Type Match Problem.

Authors:  Giulia Cereda; Richard D Gill
Journal:  Entropy (Basel)       Date:  2020-04-13       Impact factor: 2.524

4.  Typing of semen-containing mixtures using ARMS-based semen-specific CpG-InDel/STR markers.

Authors:  Zeqin Li; Yidan Li; Na Liu; Fang Yuan; Feng Liu; Jinding Liu; Keming Yun; Jiangwei Yan; Gengqian Zhang
Journal:  Int J Legal Med       Date:  2022-05-28       Impact factor: 2.686

5.  Comparison between MACSprep™ forensic sperm microbead kit and Erase Sperm Isolation kit for the enrichment of sperm fractions recovered from sexual assault samples.

Authors:  Frederic Grosjean; Marylou Favre; Vincent Castella
Journal:  Int J Legal Med       Date:  2022-06-30       Impact factor: 2.686

6.  DIP-microhaplotypes: new markers for detection of unbalanced DNA mixtures.

Authors:  Jinding Liu; Ting Hao; Xiaojuan Cheng; Jiaqi Wang; Wenyan Li; Zidong Liu; Jie Shi; Zeqin Li; Jianbo Ren; Keming Yun; Gengqian Zhang
Journal:  Int J Legal Med       Date:  2020-05-05       Impact factor: 2.686

7.  A novel multiplex assay of SNP-STR markers for forensic purpose.

Authors:  Tian Wei; Fei Liao; Yaowu Wang; Chao Pan; Chao Xiao; Daixin Huang
Journal:  PLoS One       Date:  2018-07-18       Impact factor: 3.240

8.  Multi-Indel: A Microhaplotype Marker Can Be Typed Using Capillary Electrophoresis Platforms.

Authors:  Shengqiu Qu; Meili Lv; Jiaming Xue; Jing Zhu; Li Wang; Hui Jian; Yuqing Liu; Ranran Zhang; Lagabaiyila Zha; Weibo Liang; Lin Zhang
Journal:  Front Genet       Date:  2020-10-23       Impact factor: 4.599

  8 in total

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