Literature DB >> 24805122

Routes for breaching and protecting genetic privacy.

Yaniv Erlich1, Arvind Narayanan2.   

Abstract

We are entering an era of ubiquitous genetic information for research, clinical care and personal curiosity. Sharing these data sets is vital for progress in biomedical research. However, a growing concern is the ability to protect the genetic privacy of the data originators. Here, we present an overview of genetic privacy breaching strategies. We outline the principles of each technique, indicate the underlying assumptions, and assess their technological complexity and maturation. We then review potential mitigation methods for privacy-preserving dissemination of sensitive data and highlight different cases that are relevant to genetic applications.

Entities:  

Mesh:

Year:  2014        PMID: 24805122      PMCID: PMC4151119          DOI: 10.1038/nrg3723

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  73 in total

1.  Found on the web, with DNA: a boy's father.

Authors:  Rob Stein
Journal:  Washington Post       Date:  2005-11-13

2.  Pseudonymization of radiology data for research purposes.

Authors:  Rita Noumeir; Alain Lemay; Jean-Marc Lina
Journal:  J Digit Imaging       Date:  2007-09       Impact factor: 4.056

3.  A mechanism for controlled access to GWAS data: experience of the GAIN Data Access Committee.

Authors:  Erin M Ramos; Corina Din-Lovinescu; Ebony B Bookman; Lisa J McNeil; Carl C Baker; Georgy Godynskiy; Emily L Harris; Thomas Lehner; Catherine McKeon; Joel Moss; Vaurice L Starks; Stephen T Sherry; Teri A Manolio; Laura Lyman Rodriguez
Journal:  Am J Hum Genet       Date:  2013-04-04       Impact factor: 11.025

4.  Power to the people: participant ownership of clinical trial data.

Authors:  Sharon F Terry; Patrick F Terry
Journal:  Sci Transl Med       Date:  2011-02-09       Impact factor: 17.956

5.  Technical and policy approaches to balancing patient privacy and data sharing in clinical and translational research.

Authors:  Bradley Malin; David Karp; Richard H Scheuermann
Journal:  J Investig Med       Date:  2010-01       Impact factor: 2.895

6.  Abstractions for Genomics.

Authors:  Vineet Bafna; Christos Kozanitis; Alin Deutsch; Lucila Ohno-Machado; Andrew Heiberg; George Varghese
Journal:  Commun ACM       Date:  2013-01       Impact factor: 4.654

7.  Detection of sharing by descent, long-range phasing and haplotype imputation.

Authors:  Augustine Kong; Gisli Masson; Michael L Frigge; Arnaldur Gylfason; Pasha Zusmanovich; Gudmar Thorleifsson; Pall I Olason; Andres Ingason; Stacy Steinberg; Thorunn Rafnar; Patrick Sulem; Magali Mouy; Frosti Jonsson; Unnur Thorsteinsdottir; Daniel F Gudbjartsson; Hreinn Stefansson; Kari Stefansson
Journal:  Nat Genet       Date:  2008-09       Impact factor: 38.330

8.  Predicting human age with bloodstains by sjTREC quantification.

Authors:  Xue-ling Ou; Jun Gao; Huan Wang; Hong-sheng Wang; Hui-ling Lu; Hong-yu Sun
Journal:  PLoS One       Date:  2012-08-03       Impact factor: 3.240

9.  An integrated map of genetic variation from 1,092 human genomes.

Authors:  Goncalo R Abecasis; Adam Auton; Lisa D Brooks; Mark A DePristo; Richard M Durbin; Robert E Handsaker; Hyun Min Kang; Gabor T Marth; Gil A McVean
Journal:  Nature       Date:  2012-11-01       Impact factor: 49.962

10.  Analysis of 6,515 exomes reveals the recent origin of most human protein-coding variants.

Authors:  Wenqing Fu; Timothy D O'Connor; Goo Jun; Hyun Min Kang; Goncalo Abecasis; Suzanne M Leal; Stacey Gabriel; Mark J Rieder; David Altshuler; Jay Shendure; Deborah A Nickerson; Michael J Bamshad; Joshua M Akey
Journal:  Nature       Date:  2012-11-28       Impact factor: 49.962

View more
  102 in total

Review 1.  Benefits and Risks of Sharing Genomic Information.

Authors:  Dhikshitha Balaji; Sharon F Terry
Journal:  Genet Test Mol Biomarkers       Date:  2015-11-20

2.  Quantification of private information leakage from phenotype-genotype data: linking attacks.

Authors:  Arif Harmanci; Mark Gerstein
Journal:  Nat Methods       Date:  2016-02-01       Impact factor: 28.547

Review 3.  Privacy challenges and research opportunities for genomic data sharing.

Authors:  Luca Bonomi; Yingxiang Huang; Lucila Ohno-Machado
Journal:  Nat Genet       Date:  2020-06-29       Impact factor: 38.330

Review 4.  Progress Toward Cancer Data Ecosystems.

Authors:  Robert L Grossman
Journal:  Cancer J       Date:  2018 May/Jun       Impact factor: 3.360

5.  How to Accurately and Privately Identify Anomalies.

Authors:  Hafiz Asif; Periklis A Papakonstantinou; Jaideep Vaidya
Journal:  Conf Comput Commun Secur       Date:  2019-11

6.  How should the legal framework for the protection of human genomic data be formulated?-Implications from the revision processes of the Act on the Protection of Personal Information (PPI Act).

Authors:  Natsuko Yamamoto; Minae Kawashima; Takanori Fujita; Masatomo Suzuki; Kazuto Kato
Journal:  J Hum Genet       Date:  2015-01-15       Impact factor: 3.172

7.  Re-identifiability of genomic data and the GDPR: Assessing the re-identifiability of genomic data in light of the EU General Data Protection Regulation.

Authors:  Mahsa Shabani; Luca Marelli
Journal:  EMBO Rep       Date:  2019-05-24       Impact factor: 8.807

8.  Linkage disequilibrium matches forensic genetic records to disjoint genomic marker sets.

Authors:  Michael D Edge; Bridget F B Algee-Hewitt; Trevor J Pemberton; Jun Z Li; Noah A Rosenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-15       Impact factor: 11.205

9.  Expanding Access to Large-Scale Genomic Data While Promoting Privacy: A Game Theoretic Approach.

Authors:  Zhiyu Wan; Yevgeniy Vorobeychik; Weiyi Xia; Ellen Wright Clayton; Murat Kantarcioglu; Bradley Malin
Journal:  Am J Hum Genet       Date:  2017-01-05       Impact factor: 11.025

Review 10.  An overview of human genetic privacy.

Authors:  Xinghua Shi; Xintao Wu
Journal:  Ann N Y Acad Sci       Date:  2016-09-14       Impact factor: 5.691

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.