Literature DB >> 2479900

Mineral catalysis of the formation of dimers of 5'-AMP in aqueous solution: the possible role of montmorillonite clays in the prebiotic synthesis of RNA.

J P Ferris1, G Ertem, V Agarwal.   

Abstract

The reaction of the 5'-AMP with water soluble carbodiimide (EDAC) in the presence of Na+-montmorillonite 22A results in the formation of 2',5'-(pA)2 (18.9%), 3',5'-(pA)2 (11%), and AppA (4.8%). When poly(U) is used in place of the clay the product yields are 2',5'-(pA)2 (15.5%), 3',5'-(pA)2 (3.7%) and AppA (14.9%). The 3',5'-cyclic dinucleotide, 3',5'-c(pA)2, is also formed when poly(U) is used. AppA is the principal reaction product when neither clay nor poly(U) is present in the reaction mixture. Products which contain the phosphodiester bond are formed at different ionic strengths, pH and temperatures using Na+-montmorillonite. Phosphodiester bond formation was not observed when Cu2+-montmorillonite was used or when DISN was used in the place of EDAC. The extent catalysis of phosphodiester bond formation varied with the particular clay mineral used. Those Na+-clays which bind 5'-AMP more strongly are better catalysts. Cu2+-montmorillonite, which binds 5'-AMP strongly, exhibits no catalytic activity.

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Year:  1989        PMID: 2479900     DOI: 10.1007/bf01808150

Source DB:  PubMed          Journal:  Orig Life Evol Biosph        ISSN: 0169-6149            Impact factor:   1.950


  18 in total

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Authors:  H Sawai; L E Orgel
Journal:  J Am Chem Soc       Date:  1975-06-11       Impact factor: 15.419

2.  Montmorillonite: a multifunctional mineral catalyst for the prebiological formation of phosphate esters.

Authors:  J P Ferris; C H Huang; W J Hagan
Journal:  Orig Life Evol Biosph       Date:  1988       Impact factor: 1.950

3.  Prebiotic synthesis: problems and challenges.

Authors:  J P Ferris
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1987

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Authors:  G F Joyce; A W Schwartz; S L Miller; L E Orgel
Journal:  Proc Natl Acad Sci U S A       Date:  1987-07       Impact factor: 11.205

5.  Mode of action and base specificity of a nuclease from the silkworm.

Authors:  E Soeda; J Mukai; S Akune
Journal:  J Biochem       Date:  1968-01       Impact factor: 3.387

6.  Computer-assisted characterization of oligoribonucleotides by their ultraviolet absorption.

Authors:  J N Toal; G W Rushizky; A W Pratt; H A Sober
Journal:  Anal Biochem       Date:  1968-04       Impact factor: 3.365

7.  Helix formation between polyribonucleotides and purines, purine nucleosides and nucleotides. II.

Authors:  F B Howard; J Frazier; M F Singer; H T Miles
Journal:  J Mol Biol       Date:  1966-04       Impact factor: 5.469

8.  The adsorption and reaction of adenine nucleotides on montmorillonite.

Authors:  J P Ferris; W J Hagan
Journal:  Orig Life Evol Biosph       Date:  1986       Impact factor: 1.950

9.  The adsorption of nucleotides and polynucleotides on montmorillonite clay.

Authors:  J P Ferris; G Ertem; V K Agarwal
Journal:  Orig Life Evol Biosph       Date:  1989       Impact factor: 1.950

10.  Preparation of ligation intermediates and related polynucleotide pyrophosphates.

Authors:  B C Chu; L E Orgel
Journal:  Biochim Biophys Acta       Date:  1984-05-15
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  22 in total

1.  Abiotic synthesis of amino acids under hydrothermal conditions and the origin of life: a perpetual phenomenon?

Authors:  R J Hennet; N G Holm; M H Engel
Journal:  Naturwissenschaften       Date:  1992-08

2.  Formation of activated biomolecules by condensation on mineral surfaces--a comparison of peptide bond formation and phosphate condensation.

Authors:  Thomas Georgelin; Maguy Jaber; Houssein Bazzi; Jean-François Lambert
Journal:  Orig Life Evol Biosph       Date:  2013-11-26       Impact factor: 1.950

Review 3.  Walking over 4 Gya: Chemical Evolution from Photochemistry to Mineral and Organic Chemistries Leading to an RNA World.

Authors:  Kunio Kawamura; Marie-Christine Maurel
Journal:  Orig Life Evol Biosph       Date:  2017-04-21       Impact factor: 1.950

4.  Emergence of self-reproduction in cooperative chemical evolution of prebiological molecules.

Authors:  Maya Fishkis
Journal:  Orig Life Evol Biosph       Date:  2010-09-01       Impact factor: 1.950

5.  The binding and reactions of nucleotides and polynucleotides on iron oxide hydroxide polymorphs.

Authors:  N G Holm; G Ertem; J P Ferris
Journal:  Orig Life Evol Biosph       Date:  1993-06       Impact factor: 1.950

6.  Clay catalysis of oligonucleotide formation: kinetics of the reaction of the 5'-phosphorimidazolides of nucleotides with the non-basic heterocycles uracil and hypoxanthine.

Authors:  K Kawamura; J P Ferris
Journal:  Orig Life Evol Biosph       Date:  1999-12       Impact factor: 1.950

7.  Oligomerization reactions of deoxyribonucleotides on montmorillonite clay: the effect of mononucleotide structure on phosphodiester bond formation.

Authors:  J P Ferris
Journal:  Orig Life Evol Biosph       Date:  1989       Impact factor: 1.950

8.  Montmorillonite, oligonucleotides, RNA and origin of life.

Authors:  Gözen Ertem
Journal:  Orig Life Evol Biosph       Date:  2004-12       Impact factor: 1.950

9.  Steps towards the formation of a protocell: the possible role of short peptides.

Authors:  Maya Fishkis
Journal:  Orig Life Evol Biosph       Date:  2007-09-14       Impact factor: 1.950

10.  Formation of RNA oligomers on montmorillonite: site of catalysis.

Authors:  G Ertem; J P Ferris
Journal:  Orig Life Evol Biosph       Date:  1998-10       Impact factor: 1.950

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