Literature DB >> 11536623

The adsorption of nucleotides and polynucleotides on montmorillonite clay.

J P Ferris1, G Ertem, V K Agarwal.   

Abstract

The binding of adenine derivatives to Na(+)-montmorillonite increases in the order 5'AMP, 3'-AMP, 5'ADP < adenosine < purine, adenine. With the exception of cytosine, cytosine derivatives bind less strongly than the corresponding adenine derivatives in the order 5'-CMP < cytidine < cytosine. There is little difference in the binding of uracil derivatives and these compounds bind less strongly than the corresponding adenine analogs. It is concluded that the adenine ring in adenine derivatives is protonated by the acidic montmorillonite surface and binding is a consequence of the electrostatic interaction between the protonated base and the negative charges on the surface of the montmorillonite. Different binding trends were observed with Cu(2+)-montmorillonite with AMP binding more strongly than adenosine and UMP binding more strongly than uridine. It is concluded that ligation to the Cu2+ is a major force in the binding of nucleotides to Cu(2+)-montmorillonite and are not readily washed from the clay. Factors contributing to the binding are discussed. Watson-Crick hydrogen bonding of 5'-AMP to poly(U) and 5'GMP to poly(C) was observed when the homopolymers are bound to the surface of the clay. No association of 5'-UMP to poly(U) bound to clay was detected. The possible role of montmorillonite clays in the prebiotic formation of RNA is discussed.

Entities:  

Keywords:  NASA Discipline Exobiology; Non-NASA Center

Mesh:

Substances:

Year:  1989        PMID: 11536623     DOI: 10.1007/bf01808149

Source DB:  PubMed          Journal:  Orig Life Evol Biosph        ISSN: 0169-6149            Impact factor:   1.950


  14 in total

1.  Montmorillonite: a multifunctional mineral catalyst for the prebiological formation of phosphate esters.

Authors:  J P Ferris; C H Huang; W J Hagan
Journal:  Orig Life Evol Biosph       Date:  1988       Impact factor: 1.950

2.  The biogeochemical cycle of the adsorbed template. I: Formation of the template.

Authors:  D Lazard; N Lahav; J B Orenberg
Journal:  Orig Life Evol Biosph       Date:  1987       Impact factor: 1.950

3.  Sites and thermodynamic quantities associated with proton and metal ion interaction with ribonucleic acid, deoxyribonucleic acid, and their constituent bases, nucleosides, and nucleotides.

Authors:  R M Izatt; J J Christensen; J H Rytting
Journal:  Chem Rev       Date:  1971-10       Impact factor: 60.622

4.  Nonenzymatic synthesis of oligoadenylates on a polyuridylic acid template.

Authors:  J Sulston; R Lohrmann; L E Orgel; H T Miles
Journal:  Proc Natl Acad Sci U S A       Date:  1968-03       Impact factor: 11.205

5.  A possible role of fluctuating clay-water systems in the production of ordered prebiotic oligomers.

Authors:  N Lahav; D H White
Journal:  J Mol Evol       Date:  1980-09       Impact factor: 2.395

6.  Clay and the origin of life.

Authors:  C Ponnamperuma; A Shimoyama; E Friebele
Journal:  Orig Life       Date:  1982-03

7.  Helix formation between polyribonucleotides and purines, purine nucleosides and nucleotides. II.

Authors:  F B Howard; J Frazier; M F Singer; H T Miles
Journal:  J Mol Biol       Date:  1966-04       Impact factor: 5.469

8.  The adsorption and reaction of adenine nucleotides on montmorillonite.

Authors:  J P Ferris; W J Hagan
Journal:  Orig Life Evol Biosph       Date:  1986       Impact factor: 1.950

9.  The biogeochemical cycle of the adsorbed template. II: Selective adsorption of mononucleotides on adsorbed polynucleotide templates.

Authors:  D Lazard; N Lahav; J B Orenberg
Journal:  Orig Life Evol Biosph       Date:  1988       Impact factor: 1.950

10.  Clays in prebiological chemistry.

Authors:  M Rao; D G Odom; J Oró
Journal:  J Mol Evol       Date:  1980-08       Impact factor: 2.395

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  24 in total

1.  Adsorption of 5'-AMP and catalytic synthesis of 5'-ADP onto phosphate surfaces: correlation to solid matrix structures.

Authors:  A C Tessis; H Salim De Amorim; M Farina; F DeSouza-Barros; A Vieyra
Journal:  Orig Life Evol Biosph       Date:  1995-08       Impact factor: 1.950

Review 2.  A review of conditions affecting the radiolysis due to 40K on nucleic acid bases and their derivatives adsorbed on clay minerals: implications in prebiotic chemistry.

Authors:  F G Mosqueira; G Albarran; A Negron-Mendoza
Journal:  Orig Life Evol Biosph       Date:  1996-02       Impact factor: 1.950

3.  Binding of adenine and adenine-related compounds to the clay montmorillonite and the mineral hydroxylapatite.

Authors:  D Winter; G Zubay
Journal:  Orig Life Evol Biosph       Date:  1995-06       Impact factor: 1.950

4.  Effect of inhibitors on the montmorillonite clay-catalyzed formation of RNA: studies on the reaction pathway.

Authors:  K J Wang; J P Ferris
Journal:  Orig Life Evol Biosph       Date:  2001 Aug-Oct       Impact factor: 1.950

5.  Cations as mediators of the adsorption of nucleic acids on clay surfaces in prebiotic environments.

Authors:  Marco Franchi; James P Ferris; Enzo Gallori
Journal:  Orig Life Evol Biosph       Date:  2003-02       Impact factor: 1.950

6.  Homochiral selectivity in RNA synthesis: montmorillonite-catalyzed quaternary reactions of D, L-purine with D, L- pyrimidine nucleotides.

Authors:  Prakash C Joshi; Michael F Aldersley; James P Ferris
Journal:  Orig Life Evol Biosph       Date:  2010-08-20       Impact factor: 1.950

7.  Catalysis and prebiotic RNA synthesis.

Authors:  J P Ferris
Journal:  Orig Life Evol Biosph       Date:  1993-12       Impact factor: 1.950

8.  Salinity Effects on the Adsorption of Nucleic Acid Compounds on Na-Montmorillonite: a Prebiotic Chemistry Experiment.

Authors:  Saúl A Villafañe-Barajas; João Paulo T Baú; María Colín-García; Alicia Negrón-Mendoza; Alejandro Heredia-Barbero; Teresa Pi-Puig; Dimas A M Zaia
Journal:  Orig Life Evol Biosph       Date:  2018-02-01       Impact factor: 1.950

9.  Montmorillonite, oligonucleotides, RNA and origin of life.

Authors:  Gözen Ertem
Journal:  Orig Life Evol Biosph       Date:  2004-12       Impact factor: 1.950

10.  Possible role of metal(II) octacyanomolybdate(IV) in chemical evolution: interaction with ribose nucleotides.

Authors:  Anand Kumar
Journal:  Orig Life Evol Biosph       Date:  2012-12-21       Impact factor: 1.950

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