Literature DB >> 24797072

Fidelity of histone gene regulation is obligatory for genome replication and stability.

Prachi N Ghule, Rong-Lin Xie, Ricardo Medina, Jennifer L Colby, Stephen N Jones, Jane B Lian, Janet L Stein, Andre J van Wijnen, Gary S Stein.   

Abstract

Fidelity of chromatin organization is crucial for normal cell cycle progression, and perturbations in packaging of DNA may predispose to transformation. Histone H4 protein is the most highly conserved chromatin protein, required for nucleosome assembly, with multiple histone H4 gene copies encoding identical protein. There is a long-standing recognition of the linkage of histone gene expression and DNA replication. A fundamental and unresolved question is the mechanism that couples histone biosynthesis with DNA replication and fidelity of cell cycle control. Here, we conditionally ablated the obligatory histone H4 transcription factor HINFP to cause depletion of histone H4 in mammalian cells. Deregulation of histone H4 results in catastrophic cellular and molecular defects that lead to genomic instability. Histone H4 depletion increases nucleosome spacing, impedes DNA synthesis, alters chromosome complement, and creates replicative stress. Our study provides functional evidence that the tight coupling between DNA replication and histone synthesis is reciprocal.

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Year:  2014        PMID: 24797072      PMCID: PMC4097655          DOI: 10.1128/MCB.01567-13

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  57 in total

1.  The histone gene transcription factor HiNF-P stabilizes its cell cycle regulatory co-activator p220NPAT.

Authors:  Ricardo Medina; Andre J van Wijnen; Gary S Stein; Janet L Stein
Journal:  Biochemistry       Date:  2006-12-26       Impact factor: 3.162

Review 2.  Formation of the 3' end of histone mRNA: getting closer to the end.

Authors:  Zbigniew Dominski; William F Marzluff
Journal:  Gene       Date:  2007-05-04       Impact factor: 3.688

3.  Expression of NPAT, a novel substrate of cyclin E-CDK2, promotes S-phase entry.

Authors:  J Zhao; B Dynlacht; T Imai; T Hori; E Harlow
Journal:  Genes Dev       Date:  1998-02-15       Impact factor: 11.361

4.  A biomarker that identifies senescent human cells in culture and in aging skin in vivo.

Authors:  G P Dimri; X Lee; G Basile; M Acosta; G Scott; C Roskelley; E E Medrano; M Linskens; I Rubelj; O Pereira-Smith
Journal:  Proc Natl Acad Sci U S A       Date:  1995-09-26       Impact factor: 11.205

5.  Requirement of protein synthesis for the coupling of histone mRNA levels and DNA replication.

Authors:  S Helms; L Baumbach; G Stein; J Stein
Journal:  FEBS Lett       Date:  1984-03-12       Impact factor: 4.124

6.  Establishment of histone gene regulation and cell cycle checkpoint control in human embryonic stem cells.

Authors:  Klaus A Becker; Janet L Stein; Jane B Lian; Andre J van Wijnen; Gary S Stein
Journal:  J Cell Physiol       Date:  2007-02       Impact factor: 6.384

7.  DNA damage induces downregulation of histone gene expression through the G1 checkpoint pathway.

Authors:  Chuan Su; Guang Gao; Sandra Schneider; Christopher Helt; Carsten Weiss; Michael A O'Reilly; Dirk Bohmann; Jiyong Zhao
Journal:  EMBO J       Date:  2004-02-19       Impact factor: 11.598

8.  A multifaceted FISH approach to study endogenous RNAs and DNAs in native nuclear and cell structures.

Authors:  Meg Byron; Lisa L Hall; Jeanne B Lawrence
Journal:  Curr Protoc Hum Genet       Date:  2013-01

Review 9.  Cell cycle dependent phosphorylation and subnuclear organization of the histone gene regulator p220(NPAT) in human embryonic stem cells.

Authors:  Prachi N Ghule; Klaus A Becker; J Wade Harper; Jane B Lian; Janet L Stein; Andre J van Wijnen; Gary S Stein
Journal:  J Cell Physiol       Date:  2007-10       Impact factor: 6.384

10.  Systems-wide RNAi analysis of CASP8AP2/FLASH shows transcriptional deregulation of the replication-dependent histone genes and extensive effects on the transcriptome of colorectal cancer cells.

Authors:  Amanda B Hummon; Jason J Pitt; Jordi Camps; Georg Emons; Susan B Skube; Konrad Huppi; Tamara L Jones; Tim Beissbarth; Frank Kramer; Marian Grade; Michael J Difilippantonio; Thomas Ried; Natasha J Caplen
Journal:  Mol Cancer       Date:  2012-01-04       Impact factor: 27.401

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  16 in total

Review 1.  Coordinating cell cycle-regulated histone gene expression through assembly and function of the Histone Locus Body.

Authors:  Robert J Duronio; William F Marzluff
Journal:  RNA Biol       Date:  2017-01-06       Impact factor: 4.652

2.  p53 checkpoint ablation exacerbates the phenotype of Hinfp dependent histone H4 deficiency.

Authors:  Prachi N Ghule; Rong-Lin Xie; Jennifer L Colby; Stephen N Jones; Jane B Lian; Andre J van Wijnen; Janet L Stein; Gary S Stein
Journal:  Cell Cycle       Date:  2015-06-01       Impact factor: 4.534

3.  Intranuclear and higher-order chromatin organization of the major histone gene cluster in breast cancer.

Authors:  Andrew J Fritz; Prachi N Ghule; Joseph R Boyd; Coralee E Tye; Natalie A Page; Deli Hong; David J Shirley; Adam S Weinheimer; Ahmet R Barutcu; Diana L Gerrard; Seth Frietze; Andre J van Wijnen; Sayyed K Zaidi; Anthony N Imbalzano; Jane B Lian; Janet L Stein; Gary S Stein
Journal:  J Cell Physiol       Date:  2017-06-22       Impact factor: 6.384

Review 4.  Histone availability as a strategy to control gene expression.

Authors:  Félix Prado; Silvia Jimeno-González; José C Reyes
Journal:  RNA Biol       Date:  2016-05-21       Impact factor: 4.652

5.  dCas9-targeted locus-specific protein isolation method identifies histone gene regulators.

Authors:  Chiahao Tsui; Carla Inouye; Michaella Levy; Andrew Lu; Laurence Florens; Michael P Washburn; Robert Tjian
Journal:  Proc Natl Acad Sci U S A       Date:  2018-03-05       Impact factor: 11.205

6.  Cell cycle gene expression networks discovered using systems biology: Significance in carcinogenesis.

Authors:  Robert E Scott; Prachi N Ghule; Janet L Stein; Gary S Stein
Journal:  J Cell Physiol       Date:  2015-10       Impact factor: 6.384

7.  Maternal expression and early induction of histone gene transcription factor Hinfp sustains development in pre-implantation embryos.

Authors:  Prachi N Ghule; Rong-Lin Xie; Jennifer L Colby; Jaime A Rivera-Pérez; Stephen N Jones; Jane B Lian; Janet L Stein; Andre J van Wijnen; Gary S Stein
Journal:  Dev Biol       Date:  2016-09-05       Impact factor: 3.582

8.  DDB1 and CUL4 associated factor 11 (DCAF11) mediates degradation of Stem-loop binding protein at the end of S phase.

Authors:  Umidahan Djakbarova; William F Marzluff; M Murat Köseoğlu
Journal:  Cell Cycle       Date:  2016-06-02       Impact factor: 4.534

9.  Promotion of Cell Viability and Histone Gene Expression by the Acetyltransferase Gcn5 and the Protein Phosphatase PP2A in Saccharomyces cerevisiae.

Authors:  Emily L Petty; Anne Lafon; Shannon L Tomlinson; Bryce A Mendelsohn; Lorraine Pillus
Journal:  Genetics       Date:  2016-06-17       Impact factor: 4.562

Review 10.  Higher order genomic organization and regulatory compartmentalization for cell cycle control at the G1/S-phase transition.

Authors:  Prachi N Ghule; David J Seward; Andrew J Fritz; Joseph R Boyd; Andre J van Wijnen; Jane B Lian; Janet L Stein; Gary S Stein
Journal:  J Cell Physiol       Date:  2018-05-10       Impact factor: 6.384

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