Literature DB >> 24795804

FP Tethering: a screening technique to rapidly identify compounds that disrupt protein-protein interactions.

Jean M Lodge1, T Justin Rettenmaier2, James A Wells2, William C Pomerantz3, Anna K Mapp4.   

Abstract

Tethering is a screening technique for discovering small-molecule fragments that bind to pre-determined sites via formation of a disulphide bond. Tethering screens traditionally rely upon mass spectrometry to detect disulphide bind formation, which requires a time-consuming liquid chromatography step. Here we show that Tethering can be performed rapidly and inexpensively using a homogenous fluorescence polarization (FP) assay that detects displacement of a peptide ligand from the protein target as an indirect readout of disulphide formation. We apply this method, termed FP Tethering, to identify fragments that disrupt the protein-protein interaction between the KIX domain of the transcriptional coactivator CBP and the transcriptional activator peptide pKID.

Entities:  

Year:  2014        PMID: 24795804      PMCID: PMC4005387          DOI: 10.1039/C3MD00356F

Source DB:  PubMed          Journal:  Medchemcomm        ISSN: 2040-2503            Impact factor:   3.597


  21 in total

Review 1.  Fluorescence polarization and anisotropy in high throughput screening: perspectives and primer.

Authors:  J C Owicki
Journal:  J Biomol Screen       Date:  2000-10

2.  Discovery of a potent small molecule IL-2 inhibitor through fragment assembly.

Authors:  Andrew C Braisted; Johan D Oslob; Warren L Delano; Jennifer Hyde; Robert S McDowell; Nathan Waal; Chul Yu; Michelle R Arkin; Brian C Raimundo
Journal:  J Am Chem Soc       Date:  2003-04-02       Impact factor: 15.419

3.  Fluorescence polarization competition assay: the range of resolvable inhibitor potency is limited by the affinity of the fluorescent ligand.

Authors:  Xinyi Huang
Journal:  J Biomol Screen       Date:  2003-02

Review 4.  Fine-tuning multiprotein complexes using small molecules.

Authors:  Andrea D Thompson; Amanda Dugan; Jason E Gestwicki; Anna K Mapp
Journal:  ACS Chem Biol       Date:  2012-07-23       Impact factor: 5.100

Review 5.  Ligand binding assays at equilibrium: validation and interpretation.

Authors:  Edward C Hulme; Mike A Trevethick
Journal:  Br J Pharmacol       Date:  2010-11       Impact factor: 8.739

6.  Solution structure of the KIX domain of CBP bound to the transactivation domain of CREB: a model for activator:coactivator interactions.

Authors:  I Radhakrishnan; G C Pérez-Alvarado; D Parker; H J Dyson; M R Montminy; P E Wright
Journal:  Cell       Date:  1997-12-12       Impact factor: 41.582

7.  Kinetic template-guided tethering of fragments.

Authors:  Rebecca H Nonoo; Alan Armstrong; David J Mann
Journal:  ChemMedChem       Date:  2012-10-02       Impact factor: 3.466

8.  Structurally distinct modes of recognition of the KIX domain of CBP by Jun and CREB.

Authors:  Kathleen M Campbell; Kevin J Lumb
Journal:  Biochemistry       Date:  2002-11-26       Impact factor: 3.162

9.  Turning a protein kinase on or off from a single allosteric site via disulfide trapping.

Authors:  Jack D Sadowsky; Mark A Burlingame; Dennis W Wolan; Christopher L McClendon; Matthew P Jacobson; James A Wells
Journal:  Proc Natl Acad Sci U S A       Date:  2011-03-23       Impact factor: 11.205

10.  Cooperativity in transcription factor binding to the coactivator CREB-binding protein (CBP). The mixed lineage leukemia protein (MLL) activation domain binds to an allosteric site on the KIX domain.

Authors:  Natalie K Goto; Tsaffrir Zor; Maria Martinez-Yamout; H Jane Dyson; Peter E Wright
Journal:  J Biol Chem       Date:  2002-08-29       Impact factor: 5.157

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  15 in total

1.  Design, synthesis and biological evaluation of regioisomers of 666-15 as inhibitors of CREB-mediated gene transcription.

Authors:  Fuchun Xie; Bingbing X Li; Xiangshu Xiao
Journal:  Bioorg Med Chem Lett       Date:  2016-12-31       Impact factor: 2.823

2.  Dissecting allosteric effects of activator-coactivator complexes using a covalent small molecule ligand.

Authors:  Ningkun Wang; Jean M Lodge; Carol A Fierke; Anna K Mapp
Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-21       Impact factor: 11.205

3.  Protein-observed (19)F-NMR for fragment screening, affinity quantification and druggability assessment.

Authors:  Clifford T Gee; Keith E Arntson; Andrew K Urick; Neeraj K Mishra; Laura M L Hawk; Andrea J Wisniewski; William C K Pomerantz
Journal:  Nat Protoc       Date:  2016-07-14       Impact factor: 13.491

4.  Fragment screening and druggability assessment for the CBP/p300 KIX domain through protein-observed 19F NMR spectroscopy.

Authors:  Clifford T Gee; Edward J Koleski; William C K Pomerantz
Journal:  Angew Chem Int Ed Engl       Date:  2015-02-04       Impact factor: 15.336

5.  Peptide Tethering: Pocket-Directed Fragment Screening for Peptidomimetic Inhibitor Discovery.

Authors:  Ashley E Modell; Frank Marrone; Nihar R Panigrahi; Yingkai Zhang; Paramjit S Arora
Journal:  J Am Chem Soc       Date:  2022-01-14       Impact factor: 15.419

Review 6.  Targeting Non-Catalytic Cysteine Residues Through Structure-Guided Drug Discovery.

Authors:  Kenneth K Hallenbeck; David M Turner; Adam R Renslo; Michelle R Arkin
Journal:  Curr Top Med Chem       Date:  2017       Impact factor: 3.295

7.  Novel Type of Prodrug Activation through a Long-Range O,N-Acyl Transfer: A Case of Water-Soluble CREB Inhibitor.

Authors:  Bingbing X Li; Fuchun Xie; Qiuhua Fan; Kerry M Barnhart; Curtis E Moore; Arnold L Rheingold; Xiangshu Xiao
Journal:  ACS Med Chem Lett       Date:  2014-08-22       Impact factor: 4.345

8.  Prepaying the entropic cost for allosteric regulation in KIX.

Authors:  Sean M Law; Jessica K Gagnon; Anna K Mapp; Charles L Brooks
Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-07       Impact factor: 11.205

Review 9.  Systematic Targeting of Protein-Protein Interactions.

Authors:  Ashley E Modell; Sarah L Blosser; Paramjit S Arora
Journal:  Trends Pharmacol Sci       Date:  2016-06-04       Impact factor: 14.819

10.  Visualizing and trapping transient oligomers in amyloid assembly pathways.

Authors:  Emma E Cawood; Theodoros K Karamanos; Andrew J Wilson; Sheena E Radford
Journal:  Biophys Chem       Date:  2020-11-10       Impact factor: 2.352

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