Literature DB >> 12656598

Discovery of a potent small molecule IL-2 inhibitor through fragment assembly.

Andrew C Braisted1, Johan D Oslob, Warren L Delano, Jennifer Hyde, Robert S McDowell, Nathan Waal, Chul Yu, Michelle R Arkin, Brian C Raimundo.   

Abstract

Using a site-directed fragment discovery method called tethering, we have identified a 60 nM small molecule antagonist of a cytokine/receptor interaction (IL-2/IL2Ralpha) with cell-based activity. Starting with a low micromolar hit, we employed a combination of tethering, structural biology, and computational analysis to design a focused set of 20 compounds. Eight of these compounds were at least 5-fold more active than the original hit. One of these compounds showed a 50-fold enhancement and represents the highest affinity inhibitor reported against this protein-protein target class. This method of coupling selected fragments with a low micromolar hit shows great potential for generating high-affinity lead compounds.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 12656598     DOI: 10.1021/ja034247i

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  40 in total

1.  Hot-spot mimicry of a cytokine receptor by a small molecule.

Authors:  Christopher D Thanos; Warren L DeLano; James A Wells
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-10       Impact factor: 11.205

Review 2.  From laptop to benchtop to bedside: structure-based drug design on protein targets.

Authors:  Lu Chen; John K Morrow; Hoang T Tran; Sharangdhar S Phatak; Lei Du-Cuny; Shuxing Zhang
Journal:  Curr Pharm Des       Date:  2012       Impact factor: 3.116

3.  A general method for discovering inhibitors of protein-DNA interactions using photonic crystal biosensors.

Authors:  Leo L Chan; Maria Pineda; James T Heeres; Paul J Hergenrother; Brian T Cunningham
Journal:  ACS Chem Biol       Date:  2008-07-18       Impact factor: 5.100

4.  Inhibition of protein-protein interactions with low molecular weight compounds.

Authors:  Marilyn M Matthews; David J Weber; Paul S Shapiro; Andrew Coop; Alexander D Mackerell
Journal:  Curr Trends Med Chem       Date:  2008-01-01

5.  Ligand deconstruction: Why some fragment binding positions are conserved and others are not.

Authors:  Dima Kozakov; David R Hall; Stefan Jehle; Sefan Jehle; Lingqi Luo; Stefan O Ochiana; Elizabeth V Jones; Michael Pollastri; Karen N Allen; Adrian Whitty; Sandor Vajda
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-27       Impact factor: 11.205

6.  A biocatalytic method for the chemoselective aerobic oxidation of aldehydes to carboxylic acids.

Authors:  Tanja Knaus; Vasilis Tseliou; Luke D Humphreys; Nigel S Scrutton; Francesco G Mutti
Journal:  Green Chem       Date:  2018-07-10       Impact factor: 10.182

7.  Structural conservation of druggable hot spots in protein-protein interfaces.

Authors:  Dima Kozakov; David R Hall; Gwo-Yu Chuang; Regina Cencic; Ryan Brenke; Laurie E Grove; Dmitri Beglov; Jerry Pelletier; Adrian Whitty; Sandor Vajda
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-01       Impact factor: 11.205

8.  Arginine mimetics using α-guanidino acids: introduction of functional groups and stereochemistry adjacent to recognition guanidiniums in peptides.

Authors:  Shalini Balakrishnan; Michael J Scheuermann; Neal J Zondlo
Journal:  Chembiochem       Date:  2011-12-23       Impact factor: 3.164

Review 9.  Small molecules, big targets: drug discovery faces the protein-protein interaction challenge.

Authors:  Duncan E Scott; Andrew R Bayly; Chris Abell; John Skidmore
Journal:  Nat Rev Drug Discov       Date:  2016-04-11       Impact factor: 84.694

10.  Discovery of an allosteric site in the caspases.

Authors:  Jeanne A Hardy; Joni Lam; Jack T Nguyen; Tom O'Brien; James A Wells
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-16       Impact factor: 11.205

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.