Literature DB >> 24792952

Designed abscisic acid analogs as antagonists of PYL-PP2C receptor interactions.

Jun Takeuchi1, Masanori Okamoto2, Tomonori Akiyama3, Takuya Muto4, Shunsuke Yajima3, Masayuki Sue5, Mitsunori Seo6, Yuri Kanno6, Tsunashi Kamo7, Akira Endo8, Eiji Nambara9, Nobuhiro Hirai10, Toshiyuki Ohnishi11, Sean R Cutler12, Yasushi Todoroki13.   

Abstract

The plant stress hormone abscisic acid (ABA) is critical for several abiotic stress responses. ABA signaling is normally repressed by group-A protein phosphatases 2C (PP2Cs), but stress-induced ABA binds Arabidopsis PYR/PYL/RCAR (PYL) receptors, which then bind and inhibit PP2Cs. X-ray structures of several receptor-ABA complexes revealed a tunnel above ABA's 3' ring CH that opens at the PP2C binding interface. Here, ABA analogs with sufficiently long 3' alkyl chains were predicted to traverse this tunnel and block PYL-PP2C interactions. To test this, a series of 3'-alkylsulfanyl ABAs were synthesized with different alkyl chain lengths. Physiological, biochemical and structural analyses revealed that a six-carbon alkyl substitution produced a potent ABA antagonist that was sufficiently active to block multiple stress-induced ABA responses in vivo. This study provides a new approach for the design of ABA analogs, and the results validated structure-based design for this target class.

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Year:  2014        PMID: 24792952     DOI: 10.1038/nchembio.1524

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  53 in total

1.  Structural basis for basal activity and autoactivation of abscisic acid (ABA) signaling SnRK2 kinases.

Authors:  Ley-Moy Ng; Fen-Fen Soon; X Edward Zhou; Graham M West; Amanda Kovach; Kelly M Suino-Powell; Michael J Chalmers; Jun Li; Eu-Leong Yong; Jian-Kang Zhu; Patrick R Griffin; Karsten Melcher; H Eric Xu
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-12       Impact factor: 11.205

2.  PRODRG: a tool for high-throughput crystallography of protein-ligand complexes.

Authors:  Alexander W Schüttelkopf; Daan M F van Aalten
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-07-21

3.  Differences between the structural requirements for ABA 8'-hydroxylase inhibition and for ABA activity.

Authors:  Kotomi Ueno; Yoshiharu Araki; Nobuhiro Hirai; Shigeki Saito; Masaharu Mizutani; Kanzo Sakata; Yasushi Todoroki
Journal:  Bioorg Med Chem       Date:  2005-05-16       Impact factor: 3.641

4.  Central functions of bicarbonate in S-type anion channel activation and OST1 protein kinase in CO2 signal transduction in guard cell.

Authors:  Shaowu Xue; Honghong Hu; Amber Ries; Ebe Merilo; Hannes Kollist; Julian I Schroeder
Journal:  EMBO J       Date:  2011-03-18       Impact factor: 11.598

5.  Abscinazole-E2B, a practical and selective inhibitor of ABA 8'-hydroxylase CYP707A.

Authors:  Mariko Okazaki; Monrudee Kittikorn; Kotomi Ueno; Masaharu Mizutani; Nobuhiro Hirai; Satoru Kondo; Toshiyuki Ohnishi; Yasushi Todoroki
Journal:  Bioorg Med Chem       Date:  2012-04-05       Impact factor: 3.641

6.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

7.  Abscisic acid inhibits type 2C protein phosphatases via the PYR/PYL family of START proteins.

Authors:  Sang-Youl Park; Pauline Fung; Noriyuki Nishimura; Davin R Jensen; Hiroaki Fujii; Yang Zhao; Shelley Lumba; Julia Santiago; Americo Rodrigues; Tsz-Fung F Chow; Simon E Alfred; Dario Bonetta; Ruth Finkelstein; Nicholas J Provart; Darrell Desveaux; Pedro L Rodriguez; Peter McCourt; Jian-Kang Zhu; Julian I Schroeder; Brian F Volkman; Sean R Cutler
Journal:  Science       Date:  2009-04-30       Impact factor: 47.728

8.  Activation of dimeric ABA receptors elicits guard cell closure, ABA-regulated gene expression, and drought tolerance.

Authors:  Masanori Okamoto; Francis C Peterson; Andrew Defries; Sang-Youl Park; Akira Endo; Eiji Nambara; Brian F Volkman; Sean R Cutler
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-01       Impact factor: 11.205

9.  Complex structures of the abscisic acid receptor PYL3/RCAR13 reveal a unique regulatory mechanism.

Authors:  Xingliang Zhang; Qi Zhang; Qi Xin; Lin Yu; Zheng Wang; Wei Wu; Lun Jiang; Guoqiang Wang; Wenli Tian; Zengqin Deng; Yang Wang; Zhao Liu; Jiafu Long; Zhizhong Gong; Zhongzhou Chen
Journal:  Structure       Date:  2012-05-09       Impact factor: 5.006

Review 10.  Scaling and assessment of data quality.

Authors:  Philip Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14
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  28 in total

Review 1.  ABA and cytokinins: challenge and opportunity for plant stress research.

Authors:  Paul E Verslues
Journal:  Plant Mol Biol       Date:  2016-02-24       Impact factor: 4.076

2.  A Novel Chemical Inhibitor of ABA Signaling Targets All ABA Receptors.

Authors:  Yajin Ye; Lijuan Zhou; Xue Liu; Hao Liu; Deqiang Li; Minjie Cao; Haifeng Chen; Lin Xu; Jian-Kang Zhu; Yang Zhao
Journal:  Plant Physiol       Date:  2017-02-13       Impact factor: 8.340

3.  Abscisic Acid Receptors and Coreceptors Modulate Plant Water Use Efficiency and Water Productivity.

Authors:  Zhenyu Yang; Jinghui Liu; Fabien Poree; Rudi Schaeufele; Hendrik Helmke; Jens Frackenpohl; Stefan Lehr; Pascal von Koskull-Döring; Alexander Christmann; Hans Schnyder; Urs Schmidhalter; Erwin Grill
Journal:  Plant Physiol       Date:  2019-03-18       Impact factor: 8.340

Review 4.  Plant synthetic biology for molecular engineering of signalling and development.

Authors:  Jennifer L Nemhauser; Keiko U Torii
Journal:  Nat Plants       Date:  2016-03-02       Impact factor: 15.793

5.  Substituted Phthalimide AC94377 Is a Selective Agonist of the Gibberellin Receptor GID1.

Authors:  Kai Jiang; Masato Otani; Hiroaki Shimotakahara; Jung-Min Yoon; Seung-Hyun Park; Tomoko Miyaji; Takeshi Nakano; Hidemitsu Nakamura; Masatoshi Nakajima; Tadao Asami
Journal:  Plant Physiol       Date:  2016-11-29       Impact factor: 8.340

6.  Identification of Arabidopsis thaliana NRT1/PTR FAMILY (NPF) proteins capable of transporting plant hormones.

Authors:  Yasutaka Chiba; Takafumi Shimizu; Shinya Miyakawa; Yuri Kanno; Tomokazu Koshiba; Yuji Kamiya; Mitsunori Seo
Journal:  J Plant Res       Date:  2015-03-24       Impact factor: 2.629

7.  Rapid hyperosmotic-induced Ca2+ responses in Arabidopsis thaliana exhibit sensory potentiation and involvement of plastidial KEA transporters.

Authors:  Aaron B Stephan; Hans-Henning Kunz; Eric Yang; Julian I Schroeder
Journal:  Proc Natl Acad Sci U S A       Date:  2016-08-15       Impact factor: 11.205

8.  Plant signaling: abscisic acid receptor hole-in-one.

Authors:  Ken-ichiro Hayashi; Toshinori Kinoshita
Journal:  Nat Chem Biol       Date:  2014-06       Impact factor: 15.040

9.  Discovery and identification of 2-methoxy-1-naphthaldehyde as a novel strigolactone-signaling inhibitor.

Authors:  Okishi Mashita; Hikaru Koishihara; Kosuke Fukui; Hidemitsu Nakamura; Tadao Asami
Journal:  J Pestic Sci       Date:  2016-08-20       Impact factor: 1.519

10.  N availability modulates the role of NPF3.1, a gibberellin transporter, in GA-mediated phenotypes in Arabidopsis.

Authors:  Laure C David; Patrick Berquin; Yuri Kanno; Mitsunori Seo; Françoise Daniel-Vedele; Sylvie Ferrario-Méry
Journal:  Planta       Date:  2016-08-19       Impact factor: 4.116

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