Literature DB >> 24790283

A polyphasic taxonomy of Daldinia (Xylariaceae).

Marc Stadler1, Thomas Læssøe2, Jacques Fournier3, Cony Decock4, Beata Schmieschek5, Hans-Volker Tichy6, Derek Peršoh7.   

Abstract

For a monograph based on a polythetic concept, several thousands of herbarium specimens, and several hundreds of freshly collected and cultured specimens of Daldinia and allied Xylariaceae, originating from around the world, were studied for morphological traits, including by SEM, and chemically by HPLC profiles using UV-visible and mass spectrometric detection. Emphasis was given to tropical material, and importantly, ancient specimens, including as many types as possible, were tracked and studied to review earlier taxonomic concepts. An epitype of D. eschscholtzii was selected as representative of the morphochemotype that is most widely distributed in the tropics. Six new species of Daldinia from the tropics and the southern Hemisphere are described. Daldinia asphalatum is resurrected, and D. cudonia is regarded as its synonym. In addition, the following binomials are epi-, iso-, neo- and/or lectotypified: Daldinia asphalatum, D. caldariorum, D. clavata, D. cuprea, D. durissima, D. eschscholtzii, D. grandis, D. loculata, and D. vernicosa. Annellosporium and Versiomyces are regarded as synonyms of Daldinia. Many new synonymies in Daldinia are proposed, and some previously published names are rejected. In total, 47 taxa in Daldinia are recognised and a key is provided. Their biogeography, chorology, and ecology, as well as the importance of their secondary metabolites, are also discussed. The previous definition of the genus is emended. The species concept is based mainly on morphological and other phenotype-derived characters because, despite diligent search, no molecular data or cultures of several of the accepted species could be obtained. Daldinia is segregated into five major groups, based on phenotypic characteristics. Some unnamed but aberrant specimens were not found in good condition and are therefore not formally described as new species. However, they are illustrated in detail in a hope that this will facilitate the discovery of fresh material in future. A preliminary molecular phylogeny based on 5.8S/ITS nrDNA including numerous representatives of all hitherto described taxa for which cultures are extant, was found basically in agreement with the above mentioned segregation of the genus, based on morphological and chemotaxonomic evidence. In the rDNA based phylogenetic tree, Daldinia appears clearly distinct from members of the genera Annulohypoxylon and Hypoxylon; nevertheless, representatives of small genera of predominantly tropical origin (Entonaema, Phylacia, Ruwenzoria, Rhopalostroma, Thamnomyces) appear to have evolved from daldinioid ancestors and are nested inside the Daldinia clade. Interestingly, these findings correlate with chemotaxonomic characters to a great extent, especially regarding the distribution of marker metabolites in their mycelial cultures. Hence, the current study revealed for the first time that fungal secondary metabolite profiles can have taxonomic value beyond the species rank and even coincide with phylogenetic data. TAXONOMIC NOVELTIES: Daldinia andina sp. nov., D. australis sp. nov., D. hausknechtii sp. nov., D. rehmii sp. nov., D. starbaeckii sp. nov., D. theissenii sp. nov., D. cahuchosa comb. nov., D. nemorosa comb. nov.

Entities:  

Keywords:  Ascomycota; Xylariales; biodiversity; chemotaxonomy; systematics

Year:  2014        PMID: 24790283      PMCID: PMC3953824          DOI: 10.3114/sim0016

Source DB:  PubMed          Journal:  Stud Mycol        ISSN: 0166-0616            Impact factor:   16.097


  39 in total

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Authors:  A G Kozlovsky; V P Zhelifonova; V M Adanin; S M Ozerskaya; U Gräfe
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2.  Changes in secondary metabolism during stromatal ontogeny of Hypoxylon fragiforme.

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3.  Cohaerins A and B, azaphilones from the fungus Hypoxylon cohaerens, and comparison of HPLC-based metabolite profiles in Hypoxylon sect. Annulata.

Authors:  Dang Ngoc Quang; Toshihiro Hashimoto; Yoko Nomura; Hartmund Wollweber; Veronika Hellwig; Jacques Fournier; Marc Stadler; Yoshinori Asakawa
Journal:  Phytochemistry       Date:  2005-04       Impact factor: 4.072

4.  Apoptosis induction in HCT116 cells by cytochalasins isolated from the fungus Daldinia vernicosa.

Authors:  H Nagasawa; F Nagura; S B Mohamad; Y Uto; J W Zhu; T Tsukuda; T Hashimoto; Y Asakawa; H Hori
Journal:  Phytomedicine       Date:  2000-01       Impact factor: 5.340

5.  Molecular phylogeny of Hypoxylon and closely related genera.

Authors:  Huei-Mei Hsieh; Yu-Ming Ju; Jack D Rogers
Journal:  Mycologia       Date:  2005 Jul-Aug       Impact factor: 2.696

6.  Immunosuppressive polyketides from mantis-associated Daldinia eschscholzii.

Authors:  Ying L Zhang; Jie Zhang; Nan Jiang; Yan H Lu; Lu Wang; Su H Xu; Wei Wang; Gao F Zhang; Qiang Xu; Hui M Ge; Jing Ma; Yong C Song; Ren X Tan
Journal:  J Am Chem Soc       Date:  2011-03-24       Impact factor: 15.419

7.  Lepraric acid derivatives as chemotaxonomic markers in Hypoxylon aeruginosum, Chlorostroma subcubisporum and C. cyaninum, sp. nov.

Authors:  Thomas Laessøe; Prasert Srikitikulchai; Jacques Fournier; Bärbel Köpcke; Marc Stadler
Journal:  Fungal Biol       Date:  2010-03-27

8.  Natural aromatic steroids as potential molecular fossils from the fruiting bodies of the ascomycete Daldinia concentrica.

Authors:  Xiang-Dong Qin; Ji-Kai Liu
Journal:  J Nat Prod       Date:  2004-12       Impact factor: 4.050

9.  Affinities of Phylacia and the daldinoid Xylariaceae, inferred from chemotypes of cultures and ribosomal DNA sequences.

Authors:  Jens Bitzer; Thomas Laessøe; Jacques Fournier; Volker Kummer; Cony Decock; Hans-Volker Tichy; Meike Piepenbring; Derek Persoh; Marc Stadler
Journal:  Mycol Res       Date:  2007-07-26

10.  Chemical constituents of the ascomycete Daldinia concentrica.

Authors:  Dang Ngoc Quang; Toshihiro Hashimoto; Masami Tanaka; Manuela Baumgartner; Marc Stadler; Yoshinori Asakawa
Journal:  J Nat Prod       Date:  2002-12       Impact factor: 4.050

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  31 in total

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2.  Mitochondrial damage produced by phytotoxic chromenone and chromanone derivatives from endophytic fungus Daldinia eschscholtzii strain GsE13.

Authors:  Mónica Flores-Reséndiz; Patricia Lappe-Oliveras; Martha Lydia Macías-Rubalcava
Journal:  Appl Microbiol Biotechnol       Date:  2021-05-10       Impact factor: 4.813

3.  Volatiles from the ascomycete Daldinia cf. childiae (Hypoxylaceae), originating from China.

Authors:  Lukas Lauterbach; Tao Wang; Marc Stadler; Jeroen S Dickschat
Journal:  Medchemcomm       Date:  2019-03-26       Impact factor: 3.597

4.  Hygrophorus sect. Olivaceoumbrini: new boundaries, extended biogeography and unexpected diversity unravelled by transatlantic studies.

Authors:  J-M Bellanger; R Lebeuf; E Sesli; M Loizides; C Schwarz; P-A Moreau; K Liimatainen; E Larsson
Journal:  Persoonia       Date:  2021-07-02       Impact factor: 11.658

5.  Three New Species of Hypoxylon (Xylariales, Ascomycota) on a Multigene Phylogeny from Medog in Southwest China.

Authors:  Zi-Kun Song; An-Hong Zhu; Zhen-Dong Liu; Zhi Qu; Yu Li; Hai-Xia Ma
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6.  Proteomic Characterization of Lignocellulolytic Enzymes Secreted by the Insect-Associated Fungus Daldinia decipiens oita, Isolated from a Forest in Northern Japan.

Authors:  Chiaki Hori; Ruopu Song; Kazuki Matsumoto; Ruy Matsumoto; Benjamin B Minkoff; Shuzo Oita; Hideho Hara; Taichi E Takasuka
Journal:  Appl Environ Microbiol       Date:  2020-04-01       Impact factor: 4.792

7.  Effect of Isolation Conditions on Diversity of Endolichenic Fungal Communities from a Foliose Lichen, Parmotrema tinctorum.

Authors:  Ji Ho Yang; Seung-Yoon Oh; Wonyong Kim; Jung-Jae Woo; Hyeonjae Kim; Jae-Seoun Hur
Journal:  J Fungi (Basel)       Date:  2021-04-26

Review 8.  The importance of mass spectrometric dereplication in fungal secondary metabolite analysis.

Authors:  Kristian F Nielsen; Thomas O Larsen
Journal:  Front Microbiol       Date:  2015-02-17       Impact factor: 5.640

9.  Daldiniaeschsone A, a Rare Tricyclic Polyketide Having a Chromone Unit Fused to a δ-Lactone and Its Symmetrical Biphenyl Dimer, Daldiniaeschsone B, from an Endophytic Fungus Daldinia eschscholtzii SDBR-CMUNKC745.

Authors:  Natnicha Wutthiwong; Virayu Suthiphasilp; Aknarin Pintatum; Nakarin Suwannarach; Jaturong Kumla; Saisamorn Lumyong; Tharakorn Maneerat; Rawiwan Charoensup; Sarot Cheenpracha; Thunwadee Limtharakul; Stephen G Pyne; Surat Laphookhieo
Journal:  J Fungi (Basel)       Date:  2021-05-02

10.  Multigene Phylogeny Reveals Haploanthostomella elaeidis gen. et sp. nov. and Familial Replacement of Endocalyx (Xylariales, Sordariomycetes, Ascomycota).

Authors:  Sirinapa Konta; Kevin D Hyde; Prapassorn D Eungwanichayapant; Samantha C Karunarathna; Milan C Samarakoon; Jianchu Xu; Lucas A P Dauner; Sasith Tharanga Aluthwattha; Saisamorn Lumyong; Saowaluck Tibpromma
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