Literature DB >> 24789182

Multicenter feasibility study to assess external quality assessment panels for Xpert MTB/RIF assay in South Africa.

Lesley Scott1, Heidi Albert2, Chris Gilpin3, Heather Alexander4, Kyle DeGruy4, Wendy Stevens5.   

Abstract

External quality assessment (EQA) for the Xpert MTB/RIF assay is part of the quality system required for clinical and laboratory practice. Five newly developed EQA panels that use different matrices, including a lyophilized sample (Vircell, Granada, Spain), a dried tube specimen (CDC), liquid (Maine Molecular Quality Control, Inc. [MMQCI], Scarborough, ME), artificial sputum (Global Laboratory Initiative [GLI]), and a dried culture spot (National Health Laboratory Services [NHLS]), were evaluated at 11 GeneXpert testing sites in South Africa. The panels comprised Mycobacterium tuberculosis complex (MTBC)-negative, MTBC-positive (including rifampin [RIF] susceptible and RIF resistant), and nontuberculosis mycobacterial material that was inactivated and safe for transportation. Twelve qualitative and quantitative variables were scored as acceptable (1) or unacceptable (0); the overall panel performance score for the Vircell, CDC, GLI, and NHLS panels was 9 of 12, while the MMQCI panel scored 6 of 12 (owing to the need for cold chain maintenance). All panels showed good compatibility with Xpert MTB/RIF testing, and none showed PCR inhibition. The use of a liquid or dry matrix did not appear to be a distinguishing criterion, as both matrices had reduced scores on insufficient volumes, a need for extra consumables, and the ability to transfer to the Xpert MTB/RIF cartridge. EQA is an important component of the quality system required for diagnostic testing programs, but it must be complemented by routine monitoring of performance indicators and instrument verification. This study aims to introduce EQA concepts for Xpert MTB/RIF testing and evaluates five potential EQA panels.
Copyright © 2014, American Society for Microbiology. All Rights Reserved.

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Year:  2014        PMID: 24789182      PMCID: PMC4097739          DOI: 10.1128/JCM.03533-13

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  11 in total

1.  The use of an automated quantitative polymerase chain reaction (Xpert MTB/RIF) to predict the sputum smear status of tuberculosis patients.

Authors:  Grant Theron; Lancelot Pinto; Jonny Peter; Hemant Kumar Mishra; Hridesh Kumar Mishra; Richard van Zyl-Smit; Surendra Kumar Sharma; Keertan Dheda
Journal:  Clin Infect Dis       Date:  2011-12-01       Impact factor: 9.079

2.  Perspectives on introduction and implementation of new point-of-care diagnostic tests.

Authors:  Kara M Palamountain; Jeff Baker; Elliot P Cowan; Shaffiq Essajee; Laura T Mazzola; Mutsumi Metzler; Marco Schito; Wendy S Stevens; Gloria J Young; Gonzalo J Domingo
Journal:  J Infect Dis       Date:  2012-03-07       Impact factor: 5.226

3.  Dried culture spots for Xpert MTB/RIF external quality assessment: results of a phase 1 pilot study in South Africa.

Authors:  L E Scott; N Gous; B E Cunningham; B D Kana; O Perovic; L Erasmus; G J Coetzee; H Koornhof; W Stevens
Journal:  J Clin Microbiol       Date:  2011-10-05       Impact factor: 5.948

Review 4.  Laboratory medicine in Africa: a barrier to effective health care.

Authors:  Cathy A Petti; Christopher R Polage; Thomas C Quinn; Allan R Ronald; Merle A Sande
Journal:  Clin Infect Dis       Date:  2005-12-20       Impact factor: 9.079

Review 5.  Does external evaluation of laboratories improve patient safety?

Authors:  Michael A Noble
Journal:  Clin Chem Lab Med       Date:  2007       Impact factor: 3.694

Review 6.  Laboratory diagnosis of tuberculosis in resource-poor countries: challenges and opportunities.

Authors:  Linda M Parsons; Akos Somoskövi; Cristina Gutierrez; Evan Lee; C N Paramasivan; Alash'le Abimiku; Steven Spector; Giorgio Roscigno; John Nkengasong
Journal:  Clin Microbiol Rev       Date:  2011-04       Impact factor: 26.132

7.  Scaling up HIV rapid testing in developing countries: comprehensive approach for implementing quality assurance.

Authors:  Bharat S Parekh; Mireille B Kalou; George Alemnji; Chin-Yih Ou; Guy-Michel Gershy-Damet; John N Nkengasong
Journal:  Am J Clin Pathol       Date:  2010-10       Impact factor: 2.493

8.  Rapid molecular detection of tuberculosis and rifampin resistance.

Authors:  Catharina C Boehme; Pamela Nabeta; Doris Hillemann; Mark P Nicol; Shubhada Shenai; Fiorella Krapp; Jenny Allen; Rasim Tahirli; Robert Blakemore; Roxana Rustomjee; Ana Milovic; Martin Jones; Sean M O'Brien; David H Persing; Sabine Ruesch-Gerdes; Eduardo Gotuzzo; Camilla Rodrigues; David Alland; Mark D Perkins
Journal:  N Engl J Med       Date:  2010-09-01       Impact factor: 91.245

9.  Rapid detection of Mycobacterium tuberculosis and rifampin resistance by use of on-demand, near-patient technology.

Authors:  Danica Helb; Martin Jones; Elizabeth Story; Catharina Boehme; Ellen Wallace; Ken Ho; JoAnn Kop; Michelle R Owens; Richard Rodgers; Padmapriya Banada; Hassan Safi; Robert Blakemore; N T Ngoc Lan; Edward C Jones-López; Michael Levi; Michele Burday; Irene Ayakaka; Roy D Mugerwa; Bill McMillan; Emily Winn-Deen; Lee Christel; Peter Dailey; Mark D Perkins; David H Persing; David Alland
Journal:  J Clin Microbiol       Date:  2009-10-28       Impact factor: 5.948

10.  Laboratory systems and services are critical in global health: time to end the neglect?

Authors:  John N Nkengasong; Peter Nsubuga; Okey Nwanyanwu; Guy-Michel Gershy-Damet; Giorgio Roscigno; Marc Bulterys; Barry Schoub; Kevin M DeCock; Deborah Birx
Journal:  Am J Clin Pathol       Date:  2010-09       Impact factor: 2.493

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  14 in total

1.  A pilot evaluation of external quality assessment of GenoType MTBDRplus versions 1 and 2 using dried culture spot material.

Authors:  N Gous; L E Isherwood; A David; W Stevens; L E Scott
Journal:  J Clin Microbiol       Date:  2015-01-21       Impact factor: 5.948

2.  Impact of External Quality Assurance on the Quality of Xpert MTB/RIF Testing in Viet Nam.

Authors:  Vidyanidhi Gumma; Kyle DeGruy; Davara Bennett; Thanh Nguyen Thi Kim; Heidi Albert; Kyle B Bond; Steve Gutreuter; Heather Alexander; Lan Ngyuen Thi Phong; Thomas H Rush; Nhung Nguyen Viet; Hung Nguyen Van
Journal:  J Clin Microbiol       Date:  2019-02-27       Impact factor: 5.948

3.  Development and validation of external quality assessment panels for mycobacterial culture testing to diagnose tuberculosis in China.

Authors:  Jian Du; Wei Shu; Yuhong Liu; Yufeng Wang; Ying Zhan; Kexin Yu; Jingtao Gao; Liang Li; Yu Pang
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2019-07-24       Impact factor: 3.267

Review 4.  Evaluation of the Cepheid Xpert MTB/RIF assay.

Authors:  Thomas M Shinnick; Angela M Starks; Heather L Alexander; Kenneth G Castro
Journal:  Expert Rev Mol Diagn       Date:  2014-11-06       Impact factor: 5.225

Review 5.  Diagnosis of opportunistic infections: HIV co-infections - tuberculosis.

Authors:  Lesley Scott; Pedro da Silva; Catharina C Boehme; Wendy Stevens; Christopher M Gilpin
Journal:  Curr Opin HIV AIDS       Date:  2017-03       Impact factor: 4.283

6.  [Colombia need a modern national epidemiological surveillance system and to enlarge the use of molecular diagnosis in infectious diseases].

Authors:  Jorge Enrique Gómez Marín
Journal:  Infectio       Date:  2014-07-16

Review 7.  Practice Guidelines for Clinical Microbiology Laboratories: Mycobacteria.

Authors:  Betty A Forbes; Geraldine S Hall; Melissa B Miller; Susan M Novak; Marie-Claire Rowlinson; Max Salfinger; Akos Somoskövi; David M Warshauer; Michael L Wilson
Journal:  Clin Microbiol Rev       Date:  2018-01-31       Impact factor: 26.132

8.  The use of digital PCR to improve the application of quantitative molecular diagnostic methods for tuberculosis.

Authors:  Alison S Devonshire; Denise M O'Sullivan; Isobella Honeyborne; Gerwyn Jones; Maria Karczmarczyk; Jernej Pavšič; Alice Gutteridge; Mojca Milavec; Pablo Mendoza; Heinz Schimmel; Fran Van Heuverswyn; Rebecca Gorton; Daniela Maria Cirillo; Emanuele Borroni; Kathryn Harris; Marinus Barnard; Anthenette Heydenrych; Norah Ndusilo; Carole L Wallis; Keshree Pillay; Thomas Barry; Kate Reddington; Elvira Richter; Erkan Mozioğlu; Sema Akyürek; Burhanettin Yalçınkaya; Muslum Akgoz; Jana Žel; Carole A Foy; Timothy D McHugh; Jim F Huggett
Journal:  BMC Infect Dis       Date:  2016-08-03       Impact factor: 3.090

Review 9.  Development, roll-out and impact of Xpert MTB/RIF for tuberculosis: what lessons have we learnt and how can we do better?

Authors:  Heidi Albert; Ruvandhi R Nathavitharana; Chris Isaacs; Madhukar Pai; Claudia M Denkinger; Catharina C Boehme
Journal:  Eur Respir J       Date:  2016-07-13       Impact factor: 16.671

10.  Rolling Out Xpert® MTB/RIF for TB Detection in HIV-Infected Populations:An Opportunity for Systems Strengthening.

Authors:  Ishani Pathmanathan; Anand Date; William L Coggin; John Nkengasong; Amy S Piatek; Heather Alexander
Journal:  Afr J Lab Med       Date:  2017-03-31
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