Literature DB >> 24779996

Gene expression regulation in photomorphogenesis from the perspective of the central dogma.

Shu-Hsing Wu1.   

Abstract

Depending on the environment a young seedling encounters, the developmental program following seed germination could be skotomorphogenesis in the dark or photomorphogenesis in the light. Light signals are interpreted by a repertoire of photoreceptors followed by sophisticated gene expression networks, eventually resulting in developmental changes. The expression and functions of photoreceptors and key signaling molecules are highly coordinated and regulated at multiple levels of the central dogma in molecular biology. Light activates gene expression through the actions of positive transcriptional regulators and the relaxation of chromatin by histone acetylation. Small regulatory RNAs help attenuate the expression of light-responsive genes. Alternative splicing, protein phosphorylation/dephosphorylation, the formation of diverse transcriptional complexes, and selective protein degradation all contribute to proteome diversity and change the functions of individual proteins.

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Year:  2014        PMID: 24779996     DOI: 10.1146/annurev-arplant-050213-040337

Source DB:  PubMed          Journal:  Annu Rev Plant Biol        ISSN: 1543-5008            Impact factor:   26.379


  37 in total

Review 1.  Integration of nutrient, energy, light, and hormone signalling via TOR in plants.

Authors:  Yue Wu; Lin Shi; Lei Li; Liwen Fu; Yanlin Liu; Yan Xiong; Jen Sheen
Journal:  J Exp Bot       Date:  2019-04-15       Impact factor: 6.992

2.  New insights into the response of maize to fluctuations in the light environment.

Authors:  Jianzhou Qu; Xiaonan Gou; Wenxin Zhang; Ting Li; Jiquan Xue; Dongwei Guo; Shutu Xu
Journal:  Mol Genet Genomics       Date:  2021-02-25       Impact factor: 3.291

3.  Shedding some blue light on alternative promoter usage in plants.

Authors:  Brian D Gregory
Journal:  Proc Natl Acad Sci U S A       Date:  2018-07-03       Impact factor: 11.205

4.  NADPH Thioredoxin Reductase C and Thioredoxins Act Concertedly in Seedling Development.

Authors:  Valle Ojeda; Juan Manuel Pérez-Ruiz; Maricruz González; Victoria A Nájera; Mariam Sahrawy; Antonio J Serrato; Peter Geigenberger; Francisco Javier Cejudo
Journal:  Plant Physiol       Date:  2017-05-12       Impact factor: 8.340

Review 5.  Light Signaling, Root Development, and Plasticity.

Authors:  Kasper van Gelderen; Chiakai Kang; Ronald Pierik
Journal:  Plant Physiol       Date:  2017-09-22       Impact factor: 8.340

Review 6.  From milliseconds to lifetimes: tracking the dynamic behavior of transcription factors in gene networks.

Authors:  Ying Li; Kranthi Varala; Gloria M Coruzzi
Journal:  Trends Genet       Date:  2015-06-10       Impact factor: 11.639

7.  Mass Spectrometric Analyses Reveal a Central Role for Ubiquitylation in Remodeling the Arabidopsis Proteome during Photomorphogenesis.

Authors:  Victor Aguilar-Hernández; Do-Young Kim; Robert J Stankey; Mark Scalf; Lloyd M Smith; Richard D Vierstra
Journal:  Mol Plant       Date:  2017-04-28       Impact factor: 13.164

Review 8.  RNA Biology in Retinal Development and Disease.

Authors:  Lina Zelinger; Anand Swaroop
Journal:  Trends Genet       Date:  2018-01-31       Impact factor: 11.639

9.  Linking chloroplast relocation to different responses of photosynthesis to blue and red radiation in low and high light-acclimated leaves of Arabidopsis thaliana (L.).

Authors:  Erhard E Pfündel; Gwendal Latouche; Armin Meister; Zoran G Cerovic
Journal:  Photosynth Res       Date:  2018-01-27       Impact factor: 3.573

10.  Phytochrome Coordinates with a hnRNP to Regulate Alternative Splicing via an Exonic Splicing Silencer.

Authors:  Bou-Yun Lin; Chueh-Ju Shih; Hsin-Yu Hsieh; Hsiu-Chen Chen; Shih-Long Tu
Journal:  Plant Physiol       Date:  2019-09-09       Impact factor: 8.340

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