Literature DB >> 24768215

Deconvolution filtering: temporal smoothing revisited.

Keith Bush1, Josh Cisler2.   

Abstract

Inferences made from analysis of BOLD data regarding neural processes are potentially confounded by multiple competing sources: cardiac and respiratory signals, thermal effects, scanner drift, and motion-induced signal intensity changes. To address this problem, we propose deconvolution filtering, a process of systematically deconvolving and reconvolving the BOLD signal via the hemodynamic response function such that the resultant signal is composed of maximally likely neural and neurovascular signals. To test the validity of this approach, we compared the accuracy of BOLD signal variants (i.e., unfiltered, deconvolution filtered, band-pass filtered, and optimized band-pass filtered BOLD signals) in identifying useful properties of highly confounded, simulated BOLD data: (1) reconstructing the true, unconfounded BOLD signal, (2) correlation with the true, unconfounded BOLD signal, and (3) reconstructing the true functional connectivity of a three-node neural system. We also tested this approach by detecting task activation in BOLD data recorded from healthy adolescent girls (control) during an emotion processing task. Results for the estimation of functional connectivity of simulated BOLD data demonstrated that analysis (via standard estimation methods) using deconvolution filtered BOLD data achieved superior performance to analysis performed using unfiltered BOLD data and was statistically similar to well-tuned band-pass filtered BOLD data. Contrary to band-pass filtering, however, deconvolution filtering is built upon physiological arguments and has the potential, at low TR, to match the performance of an optimal band-pass filter. The results from task estimation on real BOLD data suggest that deconvolution filtering provides superior or equivalent detection of task activations relative to comparable analyses on unfiltered signals and also provides decreased variance over the estimate. In turn, these results suggest that standard preprocessing of the BOLD signal ignores significant sources of noise that can be effectively removed without damaging the underlying signal.
Copyright © 2014 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  BOLD signal; Deconvolution; Filtering; Functional connectivity; Imaging analysis; fMRI

Mesh:

Year:  2014        PMID: 24768215      PMCID: PMC4111265          DOI: 10.1016/j.mri.2014.03.002

Source DB:  PubMed          Journal:  Magn Reson Imaging        ISSN: 0730-725X            Impact factor:   2.546


  35 in total

1.  Comparing functional (PET) images: the assessment of significant change.

Authors:  K J Friston; C D Frith; P F Liddle; R S Frackowiak
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2.  AFNI: software for analysis and visualization of functional magnetic resonance neuroimages.

Authors:  R W Cox
Journal:  Comput Biomed Res       Date:  1996-06

3.  Dynamics of blood flow and oxygenation changes during brain activation: the balloon model.

Authors:  R B Buxton; E C Wong; L R Frank
Journal:  Magn Reson Med       Date:  1998-06       Impact factor: 4.668

4.  Movement-related effects in fMRI time-series.

Authors:  K J Friston; S Williams; R Howard; R S Frackowiak; R Turner
Journal:  Magn Reson Med       Date:  1996-03       Impact factor: 4.668

5.  Characterizing evoked hemodynamics with fMRI.

Authors:  K J Friston; C D Frith; R Turner; R S Frackowiak
Journal:  Neuroimage       Date:  1995-06       Impact factor: 6.556

6.  Analysis of fMRI time-series revisited--again.

Authors:  K J Worsley; K J Friston
Journal:  Neuroimage       Date:  1995-09       Impact factor: 6.556

7.  Analysis of fMRI time-series revisited.

Authors:  K J Friston; A P Holmes; J B Poline; P J Grasby; S C Williams; R S Frackowiak; R Turner
Journal:  Neuroimage       Date:  1995-03       Impact factor: 6.556

8.  Characterizing dynamic brain responses with fMRI: a multivariate approach.

Authors:  K J Friston; C D Frith; R S Frackowiak; R Turner
Journal:  Neuroimage       Date:  1995-06       Impact factor: 6.556

9.  Functional connectivity in the motor cortex of resting human brain using echo-planar MRI.

Authors:  B Biswal; F Z Yetkin; V M Haughton; J S Hyde
Journal:  Magn Reson Med       Date:  1995-10       Impact factor: 4.668

10.  Decoding neural events from fMRI BOLD signal: a comparison of existing approaches and development of a new algorithm.

Authors:  Keith Bush; Josh Cisler
Journal:  Magn Reson Imaging       Date:  2013-04-17       Impact factor: 2.546

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  2 in total

1.  Improving the precision of fMRI BOLD signal deconvolution with implications for connectivity analysis.

Authors:  Keith Bush; Josh Cisler; Jiang Bian; Gokce Hazaroglu; Onder Hazaroglu; Clint Kilts
Journal:  Magn Reson Imaging       Date:  2015-07-28       Impact factor: 2.546

2.  A deconvolution-based approach to identifying large-scale effective connectivity.

Authors:  Keith Bush; Suijian Zhou; Josh Cisler; Jiang Bian; Onder Hazaroglu; Keenan Gillispie; Kenji Yoshigoe; Clint Kilts
Journal:  Magn Reson Imaging       Date:  2015-08-04       Impact factor: 2.546

  2 in total

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