Literature DB >> 24764858

2-{[2-(2-Hy-droxy-5-meth-oxy-benzyl-idene)hydrazin-1-yl-idene]meth-yl}-4-meth-oxy-phenol.

Muhammad Taha1, Syed Adnan Ali Shah2, Sadia Sultan2, Nor Hadiani Ismail3, Sammer Yousuf4.   

Abstract

The title phenyl-hydrazine derivative, C16H16N2O4, has a crystallographically imposed centre of symmetry. Except for the methyl group, all non-H atoms are almost coplanar (r.m.s. deviation = 0.0095 Å). Intra-molecular O-H⋯N hydrogen bonds are observed, generating S(6) graph-set ring motifs.

Entities:  

Year:  2014        PMID: 24764858      PMCID: PMC3998297          DOI: 10.1107/S1600536813034636

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications and the biological activity of phenyl­hydrazine derivatives, see: Khan et al. (2013 ▶); Patel et al. (1984 ▶); Taha, Baharudin et al. (2013 ▶); Taha, Ismail et al. (2013 ▶); Khan, Shah et al. (2012 ▶); Khan, Taha et al. (2012 ▶). For structures of related compounds, see: Taha et al. (2012 ▶); Kargar et al. (2012 ▶); Zhang et al. (2008 ▶).

Experimental

Crystal data

C16H16N2O4 M = 300.31 Monoclinic, a = 6.7132 (4) Å b = 15.9369 (10) Å c = 6.8022 (4) Å β = 91.192 (2)° V = 727.59 (8) Å3 Z = 2 Mo Kα radiation μ = 0.10 mm−1 T = 273 K 0.58 × 0.22 × 0.17 mm

Data collection

Bruker SMART APEX CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2000 ▶) T min = 0.944, T max = 0.983 4243 measured reflections 1327 independent reflections 1093 reflections with I > 2σ(I) R int = 0.016

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.101 S = 1.06 1327 reflections 106 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.14 e Å−3 Δρmin = −0.12 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL, PARST (Nardelli, 1995 ▶) and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536813034636/rz5090sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813034636/rz5090Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536813034636/rz5090Isup3.cml CCDC reference: Additional supporting information: crystallographic information; 3D view; checkCIF report
C16H16N2O4F(000) = 316
Mr = 300.31Dx = 1.371 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 1747 reflections
a = 6.7132 (4) Åθ = 2.6–27.0°
b = 15.9369 (10) ŵ = 0.10 mm1
c = 6.8022 (4) ÅT = 273 K
β = 91.192 (2)°Needle, yellow
V = 727.59 (8) Å30.58 × 0.22 × 0.17 mm
Z = 2
Bruker SMART APEX CCD area-detector diffractometer1327 independent reflections
Radiation source: fine-focus sealed tube1093 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.016
ω scanθmax = 25.5°, θmin = 2.6°
Absorption correction: multi-scan (SADABS; Bruker, 2000)h = −8→7
Tmin = 0.944, Tmax = 0.983k = −18→19
4243 measured reflectionsl = −7→8
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.034H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.101w = 1/[σ2(Fo2) + (0.0505P)2 + 0.0718P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max < 0.001
1327 reflectionsΔρmax = 0.14 e Å3
106 parametersΔρmin = −0.12 e Å3
0 restraintsExtinction correction: SHELXTL (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.031 (6)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.45722 (17)0.62697 (7)−0.27087 (17)0.0865 (4)
O2−0.21947 (15)0.62524 (8)0.17505 (19)0.0767 (4)
H2−0.199 (3)0.5903 (15)0.284 (3)0.118 (8)*
N1−0.01775 (16)0.52608 (7)0.41923 (16)0.0588 (3)
C10.1157 (2)0.67416 (8)−0.2207 (2)0.0626 (4)
H1C0.11360.7055−0.33610.075*
C2−0.0501 (2)0.67158 (9)−0.1050 (2)0.0636 (4)
H2B−0.16320.7015−0.14360.076*
C3−0.0522 (2)0.62571 (8)0.0666 (2)0.0562 (4)
C40.12003 (18)0.58088 (7)0.12530 (19)0.0518 (3)
C50.28603 (19)0.58474 (8)0.0070 (2)0.0585 (4)
H5A0.40080.55590.04530.070*
C60.2857 (2)0.63003 (8)−0.1651 (2)0.0594 (4)
C70.4762 (3)0.68202 (11)−0.4318 (2)0.0842 (5)
H7A0.60650.6762−0.48560.126*
H7B0.45770.7388−0.38840.126*
H7C0.37730.6686−0.53070.126*
C80.12864 (19)0.53066 (8)0.3019 (2)0.0564 (4)
H8A0.24420.50060.33140.068*
U11U22U33U12U13U23
O10.0721 (7)0.0981 (9)0.0899 (8)0.0108 (6)0.0178 (6)0.0323 (6)
O20.0593 (6)0.0892 (8)0.0818 (8)0.0171 (5)0.0052 (5)0.0019 (6)
N10.0624 (7)0.0524 (6)0.0614 (7)−0.0025 (5)−0.0015 (5)0.0012 (5)
C10.0741 (9)0.0526 (8)0.0607 (9)0.0041 (6)−0.0104 (7)0.0025 (6)
C20.0633 (8)0.0590 (8)0.0678 (9)0.0147 (6)−0.0135 (7)−0.0034 (6)
C30.0529 (7)0.0509 (7)0.0647 (9)0.0039 (5)−0.0051 (6)−0.0089 (6)
C40.0528 (7)0.0427 (6)0.0597 (8)−0.0012 (5)−0.0049 (6)−0.0028 (5)
C50.0524 (7)0.0519 (7)0.0711 (9)0.0051 (5)−0.0038 (6)0.0063 (6)
C60.0591 (8)0.0535 (7)0.0654 (9)−0.0007 (6)−0.0010 (6)0.0039 (6)
C70.0942 (12)0.0909 (12)0.0679 (10)−0.0096 (9)0.0087 (9)0.0141 (8)
C80.0549 (7)0.0473 (7)0.0666 (9)−0.0004 (5)−0.0045 (6)−0.0006 (6)
O1—C61.3713 (17)C2—H2B0.9300
O1—C71.4105 (18)C3—C41.4101 (18)
O2—C31.3563 (16)C4—C51.3894 (17)
O2—H20.93 (2)C4—C81.4436 (18)
N1—C81.2809 (15)C5—C61.3752 (19)
N1—N1i1.394 (2)C5—H5A0.9300
C1—C21.377 (2)C7—H7A0.9600
C1—C61.386 (2)C7—H7B0.9600
C1—H1C0.9300C7—H7C0.9600
C2—C31.377 (2)C8—H8A0.9300
C6—O1—C7118.38 (12)C6—C5—C4121.95 (12)
C3—O2—H2109.0 (13)C6—C5—H5A119.0
C8—N1—N1i113.84 (13)C4—C5—H5A119.0
C2—C1—C6119.96 (14)O1—C6—C5116.20 (12)
C2—C1—H1C120.0O1—C6—C1124.77 (13)
C6—C1—H1C120.0C5—C6—C1119.03 (13)
C1—C2—C3121.54 (12)O1—C7—H7A109.5
C1—C2—H2B119.2O1—C7—H7B109.5
C3—C2—H2B119.2H7A—C7—H7B109.5
O2—C3—C2119.17 (12)O1—C7—H7C109.5
O2—C3—C4121.76 (13)H7A—C7—H7C109.5
C2—C3—C4119.07 (13)H7B—C7—H7C109.5
C5—C4—C3118.45 (12)N1—C8—C4122.15 (12)
C5—C4—C8119.20 (11)N1—C8—H8A118.9
C3—C4—C8122.35 (12)C4—C8—H8A118.9
C6—C1—C2—C3−0.1 (2)C7—O1—C6—C5−170.46 (14)
C1—C2—C3—O2−179.95 (12)C7—O1—C6—C110.2 (2)
C1—C2—C3—C40.4 (2)C4—C5—C6—O1−178.37 (12)
O2—C3—C4—C5−179.65 (11)C4—C5—C6—C11.0 (2)
C2—C3—C4—C5−0.03 (18)C2—C1—C6—O1178.72 (13)
O2—C3—C4—C81.09 (19)C2—C1—C6—C5−0.6 (2)
C2—C3—C4—C8−179.29 (12)N1i—N1—C8—C4179.45 (12)
C3—C4—C5—C6−0.68 (19)C5—C4—C8—N1178.39 (12)
C8—C4—C5—C6178.60 (12)C3—C4—C8—N1−2.36 (19)
D—H···AD—HH···AD···AD—H···A
O2—H2···N10.94 (2)1.82 (2)2.6451 (16)145.0 (18)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O2—H2⋯N10.94 (2)1.82 (2)2.6451 (16)145.0 (18)
  8 in total

1.  2,4,6-Trichlorophenylhydrazine Schiff bases as DPPH radical and super oxide anion scavengers.

Authors:  Khalid Mohammed Khan; Zarbad Shah; Viqar Uddin Ahmad; Momin Khan; Muhammad Taha; Fazal Rahim; Sajjad Ali; Nida Ambreen; Shahnaz Perveen; M Iqbal Choudhary; Wolfgang Voelter
Journal:  Med Chem       Date:  2012-05       Impact factor: 2.745

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Synthesis of 2-methoxybenzoylhydrazone and evaluation of their antileishmanial activity.

Authors:  Muhammad Taha; Mohd Syukri Baharudin; Nor Hadiani Ismail; Khalid Mohammed Khan; Faridahanim Mohd Jaafar; Salman Siddiqui; M Iqbal Choudhary
Journal:  Bioorg Med Chem Lett       Date:  2013-03-31       Impact factor: 2.823

4.  Acylhydrazide Schiff bases: DPPH radical and superoxide anion scavengers.

Authors:  Khalid Mohammed Khan; Muhammad Taha; Farzana Naz; Salman Siddiqui; Sajjad Ali; Fazal Rahim; Shahnaz Perveen; M Iqbal Choudhary
Journal:  Med Chem       Date:  2012-07       Impact factor: 2.745

5.  Synthesis, evaluation of antioxidant activity and crystal structure of 2,4-dimethylbenzoylhydrazones.

Authors:  Muhammad Taha; Nor Hadiani Ismail; Waqas Jamil; Sammer Yousuf; Faridahanim Mohd Jaafar; Muhammad Imran Ali; Syed Muhammad Kashif; Ejaz Hussain
Journal:  Molecules       Date:  2013-09-05       Impact factor: 4.411

6.  (E)-4-Meth-oxy-N'-[(pyridin-4-yl)methyl-idene]benzohydrazide monohydrate.

Authors:  Muhammad Taha; Humera Naz; Aqilah Abd Rahman; Nor Hadiani Ismail; Yousuf Sammer
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-08-25

7.  (E)-4-Amino-N'-(2-hy-droxy-5-meth-oxy-benzyl-idene)benzohydrazide monohydrate.

Authors:  Hadi Kargar; Reza Kia; Muhammad Nawaz Tahir
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-07-04

8.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  8 in total

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