Literature DB >> 22904794

(E)-4-Amino-N'-(2-hy-droxy-5-meth-oxy-benzyl-idene)benzohydrazide monohydrate.

Hadi Kargar, Reza Kia, Muhammad Nawaz Tahir.   

Abstract

In the title compound, C(15)H(15)N(3)O(3)·H(2)O, the hydazide Schiff base mol-ecule shows an E conformation around the C=N bond. An intra-molecular O-H⋯N hydrogen bond makes an S(6) ring motif. The dihedral angle between the substituted phenyl rings is 23.40 (11)°. The water mol-ecule mediates linking of neighbouring mol-ecules through O-H⋯(O,O) hydrogen bonds into infinite chains along the a axis, which are further connected together through N-H⋯O hydrogen bonds, forming a two-dimensional network parallel to (001). C-H⋯O inter-actions aso occur.

Entities:  

Year:  2012        PMID: 22904794      PMCID: PMC3414187          DOI: 10.1107/S1600536812026633

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For standard bond lengths, see: Allen et al. (1987 ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For the coordination chemistry of Schiff base and hydrazone derivatives, see: Kucukguzel et al. (2006 ▶); Karthikeyan et al. (2006 ▶). For 4-amino­benzohydrazide-derived Schiff base structures, see: Xu (2012 ▶); Shi & Li (2012 ▶); Bakir & Green (2002 ▶); Kargar et al. (2012 ▶).

Experimental

Crystal data

C15H15N3O3·H2O M = 303.32 Monoclinic, a = 4.7376 (5) Å b = 13.270 (2) Å c = 11.7265 (16) Å β = 98.459 (4)° V = 729.18 (17) Å3 Z = 2 Mo Kα radiation μ = 0.10 mm−1 T = 291 K 0.28 × 0.20 × 0.18 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.972, T max = 0.982 6511 measured reflections 1679 independent reflections 1433 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.085 S = 1.03 1679 reflections 200 parameters 1 restraint H-atom parameters constrained Δρmax = 0.14 e Å−3 Δρmin = −0.13 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶)’; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812026633/bq2366sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812026633/bq2366Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812026633/bq2366Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H15N3O3·H2OF(000) = 320
Mr = 303.32Dx = 1.381 Mg m3
Monoclinic, P21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ybCell parameters from 873 reflections
a = 4.7376 (5) Åθ = 2.5–28.5°
b = 13.270 (2) ŵ = 0.10 mm1
c = 11.7265 (16) ÅT = 291 K
β = 98.459 (4)°Prism, white
V = 729.18 (17) Å30.28 × 0.20 × 0.18 mm
Z = 2
Bruker SMART APEXII CCD area-detector diffractometer1679 independent reflections
Radiation source: fine-focus sealed tube1433 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.028
φ and ω scansθmax = 27.2°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Bruker, 2005)h = −5→6
Tmin = 0.972, Tmax = 0.982k = −17→17
6511 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.035Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.085H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0414P)2 + 0.0579P] where P = (Fo2 + 2Fc2)/3
1679 reflections(Δ/σ)max < 0.001
200 parametersΔρmax = 0.14 e Å3
1 restraintΔρmin = −0.13 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.2636 (4)0.77661 (14)−0.05541 (17)0.0508 (5)
O2−0.2127 (4)0.80740 (14)0.21112 (17)0.0525 (5)
H2−0.10700.78230.15700.079*
O3−0.7483 (4)0.51216 (16)0.43124 (16)0.0576 (6)
O1W0.2220 (4)0.39655 (14)0.06445 (17)0.0554 (5)
H1W10.39150.36180.06550.083*
H2W10.07240.36280.06020.083*
N10.9460 (5)0.49031 (19)−0.3593 (2)0.0563 (6)
H1N11.00850.5262−0.41860.084*
H2N11.03250.4284−0.32290.084*
N20.1583 (4)0.62403 (16)0.01294 (17)0.0385 (5)
H2N0.17760.55300.01640.046*
N3−0.0003 (4)0.66404 (16)0.09130 (17)0.0380 (5)
C10.4541 (4)0.6311 (2)−0.1357 (2)0.0343 (5)
C20.5460 (5)0.53219 (18)−0.1196 (2)0.0389 (6)
H2A0.49450.4956−0.05820.047*
C30.7107 (5)0.48700 (19)−0.1917 (2)0.0424 (6)
H3A0.77180.4209−0.17780.051*
C40.7876 (5)0.5391 (2)−0.2859 (2)0.0409 (6)
C50.6937 (6)0.6372 (2)−0.3037 (2)0.0470 (6)
H5A0.74070.6732−0.36640.056*
C60.5309 (5)0.6824 (2)−0.2298 (2)0.0439 (6)
H6A0.47140.7487−0.24320.053*
C70.2861 (5)0.68406 (19)−0.0575 (2)0.0359 (5)
C8−0.1204 (5)0.59925 (19)0.1497 (2)0.0388 (6)
H8A−0.09470.53090.13700.047*
C9−0.2965 (5)0.6304 (2)0.2356 (2)0.0357 (5)
C10−0.3358 (5)0.7308 (2)0.2623 (2)0.0386 (5)
C11−0.5064 (5)0.7548 (2)0.3461 (2)0.0462 (7)
H11A−0.53150.82190.36510.055*
C12−0.6366 (6)0.6808 (2)0.4005 (2)0.0459 (7)
H12A−0.74890.69810.45620.055*
C13−0.6028 (5)0.5804 (2)0.3732 (2)0.0421 (6)
C14−0.4317 (5)0.5551 (2)0.2919 (2)0.0404 (6)
H14A−0.40580.48770.27430.049*
C15−0.7400 (8)0.4101 (3)0.3976 (3)0.0687 (9)
H15A−0.86670.37130.43720.103*
H15B−0.54910.38480.41690.103*
H15C−0.79860.40470.31590.103*
U11U22U33U12U13U23
O10.0495 (10)0.0383 (11)0.0708 (13)0.0017 (8)0.0294 (9)−0.0014 (9)
O20.0604 (11)0.0439 (11)0.0593 (12)−0.0043 (9)0.0290 (10)−0.0038 (9)
O30.0680 (13)0.0610 (13)0.0512 (12)−0.0032 (10)0.0335 (10)0.0064 (9)
O1W0.0532 (11)0.0398 (10)0.0783 (14)−0.0022 (9)0.0271 (10)0.0019 (9)
N10.0682 (15)0.0580 (15)0.0502 (13)0.0072 (13)0.0343 (12)−0.0005 (12)
N20.0362 (10)0.0410 (11)0.0421 (11)0.0000 (10)0.0183 (9)−0.0052 (10)
N30.0316 (10)0.0471 (12)0.0378 (11)0.0012 (9)0.0138 (8)−0.0056 (9)
C10.0305 (11)0.0378 (13)0.0363 (12)−0.0033 (10)0.0101 (9)−0.0029 (10)
C20.0437 (13)0.0367 (13)0.0406 (13)−0.0007 (11)0.0199 (11)0.0026 (10)
C30.0483 (14)0.0364 (14)0.0460 (14)0.0041 (11)0.0182 (12)0.0000 (11)
C40.0390 (13)0.0484 (15)0.0385 (13)−0.0013 (11)0.0161 (11)−0.0050 (11)
C50.0570 (15)0.0480 (16)0.0407 (14)−0.0011 (13)0.0227 (12)0.0104 (12)
C60.0526 (15)0.0372 (14)0.0452 (14)0.0025 (12)0.0184 (12)0.0028 (11)
C70.0282 (11)0.0386 (14)0.0421 (14)−0.0011 (10)0.0093 (10)−0.0026 (11)
C80.0372 (12)0.0430 (14)0.0386 (13)0.0039 (10)0.0135 (10)−0.0034 (10)
C90.0293 (11)0.0459 (14)0.0331 (12)0.0025 (11)0.0084 (9)−0.0032 (11)
C100.0365 (13)0.0452 (14)0.0356 (12)0.0012 (11)0.0103 (10)−0.0003 (11)
C110.0495 (15)0.0501 (17)0.0412 (14)0.0055 (12)0.0143 (12)−0.0084 (12)
C120.0466 (14)0.0589 (18)0.0353 (13)0.0068 (13)0.0166 (11)−0.0042 (13)
C130.0413 (14)0.0544 (16)0.0326 (13)0.0031 (12)0.0118 (11)0.0027 (12)
C140.0422 (13)0.0427 (14)0.0391 (13)0.0072 (11)0.0148 (11)−0.0014 (11)
C150.091 (2)0.0530 (19)0.070 (2)−0.0032 (17)0.0381 (19)0.0106 (16)
O1—C71.233 (3)C3—H3A0.9300
O2—C101.355 (3)C4—C51.383 (4)
O2—H20.9261C5—C61.379 (3)
O3—C131.377 (3)C5—H5A0.9300
O3—C151.413 (4)C6—H6A0.9300
O1W—H1W10.9247C8—C91.459 (3)
O1W—H2W10.8339C8—H8A0.9300
N1—C41.383 (3)C9—C101.387 (4)
N1—H1N10.9272C9—C141.403 (4)
N1—H2N10.9864C10—C111.398 (3)
N2—C71.353 (3)C11—C121.366 (4)
N2—N31.376 (3)C11—H11A0.9300
N2—H2N0.9473C12—C131.386 (4)
N3—C81.284 (3)C12—H12A0.9300
C1—C21.387 (3)C13—C141.381 (3)
C1—C61.390 (3)C14—H14A0.9300
C1—C71.478 (3)C15—H15A0.9600
C2—C31.370 (3)C15—H15B0.9600
C2—H2A0.9300C15—H15C0.9600
C3—C41.396 (3)
C10—O2—H2110.2O1—C7—C1122.8 (2)
C13—O3—C15117.1 (2)N2—C7—C1115.4 (2)
H1W1—O1W—H2W1117.5N3—C8—C9121.5 (2)
C4—N1—H1N1119.3N3—C8—H8A119.3
C4—N1—H2N1110.4C9—C8—H8A119.3
H1N1—N1—H2N1126.4C10—C9—C14119.5 (2)
C7—N2—N3121.2 (2)C10—C9—C8122.5 (2)
C7—N2—H2N124.2C14—C9—C8118.0 (2)
N3—N2—H2N114.5O2—C10—C9122.7 (2)
C8—N3—N2115.2 (2)O2—C10—C11118.1 (2)
C2—C1—C6117.3 (2)C9—C10—C11119.2 (2)
C2—C1—C7123.5 (2)C12—C11—C10120.8 (3)
C6—C1—C7119.2 (2)C12—C11—H11A119.6
C3—C2—C1121.7 (2)C10—C11—H11A119.6
C3—C2—H2A119.1C11—C12—C13120.6 (2)
C1—C2—H2A119.1C11—C12—H12A119.7
C2—C3—C4120.7 (2)C13—C12—H12A119.7
C2—C3—H3A119.7O3—C13—C14124.7 (3)
C4—C3—H3A119.7O3—C13—C12115.8 (2)
C5—C4—N1122.6 (2)C14—C13—C12119.5 (2)
C5—C4—C3118.1 (2)C13—C14—C9120.5 (2)
N1—C4—C3119.3 (2)C13—C14—H14A119.8
C6—C5—C4120.8 (2)C9—C14—H14A119.8
C6—C5—H5A119.6O3—C15—H15A109.5
C4—C5—H5A119.6O3—C15—H15B109.5
C5—C6—C1121.5 (2)H15A—C15—H15B109.5
C5—C6—H6A119.3O3—C15—H15C109.5
C1—C6—H6A119.3H15A—C15—H15C109.5
O1—C7—N2121.8 (2)H15B—C15—H15C109.5
C7—N2—N3—C8177.2 (2)N3—C8—C9—C10−2.5 (3)
C6—C1—C2—C31.3 (3)N3—C8—C9—C14177.0 (2)
C7—C1—C2—C3−177.5 (2)C14—C9—C10—O2−179.8 (2)
C1—C2—C3—C4−1.2 (4)C8—C9—C10—O2−0.3 (4)
C2—C3—C4—C50.2 (4)C14—C9—C10—C110.9 (3)
C2—C3—C4—N1−177.9 (2)C8—C9—C10—C11−179.6 (2)
N1—C4—C5—C6178.6 (3)O2—C10—C11—C12179.8 (2)
C3—C4—C5—C60.6 (4)C9—C10—C11—C12−0.8 (4)
C4—C5—C6—C1−0.5 (4)C10—C11—C12—C13−0.2 (4)
C2—C1—C6—C5−0.4 (4)C15—O3—C13—C14−5.6 (4)
C7—C1—C6—C5178.4 (2)C15—O3—C13—C12174.2 (3)
N3—N2—C7—O1−0.8 (4)C11—C12—C13—O3−178.6 (2)
N3—N2—C7—C1178.87 (19)C11—C12—C13—C141.2 (4)
C2—C1—C7—O1162.1 (2)O3—C13—C14—C9178.7 (2)
C6—C1—C7—O1−16.6 (4)C12—C13—C14—C9−1.1 (4)
C2—C1—C7—N2−17.6 (3)C10—C9—C14—C130.0 (3)
C6—C1—C7—N2163.7 (2)C8—C9—C14—C13−179.4 (2)
N2—N3—C8—C9−179.7 (2)
D—H···AD—HH···AD···AD—H···A
O1W—H1W1···O1i0.922.002.926 (3)174
O2—H2···N30.931.852.650 (3)143
O1W—H2W1···O1ii0.831.952.787 (3)176
N2—H2N···O1W0.952.153.084 (3)167
N1—H1N1···O3iii0.932.253.043 (3)143
N1—H2N1···O2i0.992.173.141 (3)169
C2—H2A···O1W0.932.453.351 (3)163
C8—H8A···O1W0.932.563.368 (3)146
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1W—H1W1⋯O1i 0.922.002.926 (3)174
O2—H2⋯N30.931.852.650 (3)143
O1W—H2W1⋯O1ii 0.831.952.787 (3)176
N2—H2N⋯O1W 0.952.153.084 (3)167
N1—H1N1⋯O3iii 0.932.253.043 (3)143
N1—H2N1⋯O2i 0.992.173.141 (3)169
C2—H2A⋯O1W 0.932.453.351 (3)163
C8—H8A⋯O1W 0.932.563.368 (3)146

Symmetry codes: (i) ; (ii) ; (iii) .

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