| Literature DB >> 22969656 |
Muhammad Taha, Humera Naz, Aqilah Abd Rahman, Nor Hadiani Ismail, Yousuf Sammer.
Abstract
In the title compound, C(14)H(13)N(3)O(2)·H(2)O, the azomethine double bond adopts an E conformation and the N-N=C-C torsion angle is 178.37 (19)°. The dihedral angle between the benzene and pyridine rings is 5.58 (12)° and the C atom of the meth-oxy group is roughly coplanar with its attached ring [deviation = 0.157 (3) Å]. In the crystal, the components are linked by O-H⋯O, O-H⋯N, N-H⋯O and C-H⋯O hydrogen bonds, forming (001) sheets. The water O atom accepts one N-H⋯O and two C-H⋯O inter-actions from the adjacent organic mol-ecule.Entities:
Year: 2012 PMID: 22969656 PMCID: PMC3435810 DOI: 10.1107/S1600536812034988
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C14H13N3O2·H2O | |
| Monoclinic, | Mo |
| Cell parameters from 1112 reflections | |
| θ = 2.8–22.8° | |
| µ = 0.10 mm−1 | |
| β = 94.233 (2)° | |
| Block, colourless | |
| 0.20 × 0.17 × 0.10 mm |
| Bruker SMART APEX CCD diffractometer | 2560 independent reflections |
| Radiation source: fine-focus sealed tube | 1548 reflections with |
| Graphite monochromator | |
| ω scan | θmax = 25.5°, θmin = 1.4° |
| Absorption correction: multi-scan ( | |
| 7767 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2560 reflections | (Δ/σ)max < 0.001 |
| 182 parameters | Δρmax = 0.16 e Å−3 |
| 0 restraints | Δρmin = −0.20 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.0974 (2) | 0.3345 (3) | 0.05572 (5) | 0.0607 (6) | |
| O2 | 0.6325 (2) | 0.1818 (3) | −0.10876 (5) | 0.0590 (5) | |
| N1 | 0.3945 (3) | 0.3260 (3) | 0.09758 (6) | 0.0446 (5) | |
| H1A | 0.5220 | 0.3083 | 0.0985 | 0.053* | |
| N2 | 0.3018 (3) | 0.3646 (3) | 0.13646 (6) | 0.0436 (5) | |
| N3 | 0.1587 (4) | 0.5223 (4) | 0.29858 (7) | 0.0662 (7) | |
| C1 | 0.5874 (3) | 0.2320 (3) | 0.01504 (7) | 0.0413 (6) | |
| H1B | 0.6640 | 0.2206 | 0.0428 | 0.050* | |
| C2 | 0.6754 (3) | 0.1988 (3) | −0.02547 (7) | 0.0424 (6) | |
| H2A | 0.8102 | 0.1659 | −0.0250 | 0.051* | |
| C3 | 0.5623 (3) | 0.2146 (3) | −0.06665 (7) | 0.0424 (6) | |
| C4 | 0.3619 (3) | 0.2658 (4) | −0.06705 (8) | 0.0513 (7) | |
| H4A | 0.2858 | 0.2773 | −0.0948 | 0.062* | |
| C5 | 0.2756 (3) | 0.2993 (3) | −0.02691 (8) | 0.0462 (6) | |
| H5A | 0.1412 | 0.3340 | −0.0277 | 0.055* | |
| C6 | 0.3867 (3) | 0.2821 (3) | 0.01516 (7) | 0.0380 (5) | |
| C7 | 0.2800 (3) | 0.3160 (3) | 0.05702 (7) | 0.0411 (6) | |
| C8 | 0.4126 (4) | 0.3827 (4) | 0.17334 (7) | 0.0469 (6) | |
| H8A | 0.5506 | 0.3663 | 0.1732 | 0.056* | |
| C9 | 0.3230 (3) | 0.4292 (3) | 0.21603 (7) | 0.0429 (6) | |
| C10 | 0.4319 (4) | 0.4088 (4) | 0.25789 (8) | 0.0544 (7) | |
| H10A | 0.5630 | 0.3639 | 0.2592 | 0.065* | |
| C11 | 0.3438 (5) | 0.4556 (4) | 0.29754 (9) | 0.0650 (8) | |
| H11A | 0.4189 | 0.4395 | 0.3253 | 0.078* | |
| C12 | 0.0554 (4) | 0.5413 (4) | 0.25821 (9) | 0.0580 (7) | |
| H12A | −0.0747 | 0.5880 | 0.2580 | 0.070* | |
| C13 | 0.1279 (4) | 0.4965 (4) | 0.21676 (8) | 0.0499 (6) | |
| H13A | 0.0476 | 0.5110 | 0.1896 | 0.060* | |
| C14 | 0.8422 (4) | 0.1550 (5) | −0.11117 (9) | 0.0640 (8) | |
| H14A | 0.8706 | 0.1333 | −0.1424 | 0.096* | |
| H14B | 0.8852 | 0.0473 | −0.0929 | 0.096* | |
| H14C | 0.9124 | 0.2663 | −0.0998 | 0.096* | |
| O1W | 0.8218 (2) | 0.2877 (3) | 0.12291 (5) | 0.0657 (6) | |
| H1 | 0.9224 | 0.2994 | 0.1078 | 0.098* | |
| H2 | 0.8700 | 0.2103 | 0.1461 | 0.098* |
| O1 | 0.0361 (10) | 0.1027 (16) | 0.0440 (10) | 0.0027 (10) | 0.0085 (7) | 0.0049 (9) |
| O2 | 0.0496 (10) | 0.0914 (15) | 0.0373 (9) | −0.0042 (10) | 0.0115 (8) | −0.0133 (9) |
| N1 | 0.0347 (10) | 0.0645 (15) | 0.0357 (11) | 0.0026 (10) | 0.0104 (8) | 0.0015 (9) |
| N2 | 0.0415 (11) | 0.0552 (13) | 0.0352 (11) | 0.0018 (10) | 0.0111 (9) | 0.0016 (9) |
| N3 | 0.0749 (17) | 0.0805 (18) | 0.0450 (14) | −0.0011 (14) | 0.0167 (12) | −0.0098 (12) |
| C1 | 0.0384 (13) | 0.0493 (15) | 0.0358 (12) | 0.0007 (11) | 0.0012 (10) | 0.0032 (10) |
| C2 | 0.0360 (13) | 0.0508 (16) | 0.0410 (13) | 0.0012 (11) | 0.0057 (10) | −0.0028 (11) |
| C3 | 0.0419 (13) | 0.0485 (15) | 0.0378 (13) | −0.0085 (11) | 0.0102 (10) | −0.0054 (11) |
| C4 | 0.0428 (14) | 0.075 (2) | 0.0359 (14) | −0.0049 (13) | −0.0009 (10) | −0.0017 (12) |
| C5 | 0.0340 (13) | 0.0624 (18) | 0.0424 (14) | −0.0034 (12) | 0.0034 (10) | 0.0007 (12) |
| C6 | 0.0378 (12) | 0.0403 (14) | 0.0366 (12) | −0.0053 (11) | 0.0068 (9) | 0.0025 (10) |
| C7 | 0.0370 (13) | 0.0488 (16) | 0.0379 (13) | −0.0027 (11) | 0.0057 (10) | 0.0049 (11) |
| C8 | 0.0394 (13) | 0.0605 (17) | 0.0416 (14) | 0.0046 (12) | 0.0084 (11) | 0.0005 (12) |
| C9 | 0.0454 (14) | 0.0469 (16) | 0.0370 (13) | −0.0016 (12) | 0.0074 (10) | 0.0001 (11) |
| C10 | 0.0537 (15) | 0.0636 (19) | 0.0456 (15) | 0.0042 (14) | 0.0016 (11) | −0.0006 (13) |
| C11 | 0.081 (2) | 0.077 (2) | 0.0368 (15) | 0.0004 (17) | 0.0010 (13) | −0.0006 (13) |
| C12 | 0.0553 (16) | 0.0642 (19) | 0.0560 (17) | −0.0004 (14) | 0.0137 (13) | −0.0108 (14) |
| C13 | 0.0504 (15) | 0.0574 (17) | 0.0423 (14) | 0.0025 (13) | 0.0059 (11) | −0.0048 (12) |
| C14 | 0.0565 (17) | 0.087 (2) | 0.0516 (16) | 0.0062 (16) | 0.0226 (13) | −0.0059 (14) |
| O1W | 0.0371 (9) | 0.1143 (17) | 0.0465 (10) | 0.0079 (10) | 0.0095 (7) | 0.0166 (10) |
| O1—C7 | 1.226 (2) | C5—H5A | 0.9300 |
| O2—C3 | 1.370 (3) | C6—C7 | 1.481 (3) |
| O2—C14 | 1.422 (3) | C8—C9 | 1.462 (3) |
| N1—N2 | 1.362 (2) | C8—H8A | 0.9300 |
| N1—C7 | 1.365 (3) | C9—C10 | 1.385 (3) |
| N1—H1A | 0.8600 | C9—C13 | 1.390 (3) |
| N2—C8 | 1.269 (3) | C10—C11 | 1.379 (3) |
| N3—C11 | 1.326 (3) | C10—H10A | 0.9300 |
| N3—C12 | 1.330 (3) | C11—H11A | 0.9300 |
| C1—C2 | 1.382 (3) | C12—C13 | 1.375 (3) |
| C1—C6 | 1.388 (3) | C12—H12A | 0.9300 |
| C1—H1B | 0.9300 | C13—H13A | 0.9300 |
| C2—C3 | 1.379 (3) | C14—H14A | 0.9600 |
| C2—H2A | 0.9300 | C14—H14B | 0.9600 |
| C3—C4 | 1.387 (3) | C14—H14C | 0.9600 |
| C4—C5 | 1.367 (3) | O1W—H1 | 0.8361 |
| C4—H4A | 0.9300 | O1W—H2 | 0.9098 |
| C5—C6 | 1.395 (3) | ||
| C3—O2—C14 | 118.14 (18) | N1—C7—C6 | 116.9 (2) |
| N2—N1—C7 | 118.33 (18) | N2—C8—C9 | 119.9 (2) |
| N2—N1—H1A | 120.8 | N2—C8—H8A | 120.1 |
| C7—N1—H1A | 120.8 | C9—C8—H8A | 120.1 |
| C8—N2—N1 | 117.12 (19) | C10—C9—C13 | 117.0 (2) |
| C11—N3—C12 | 116.1 (2) | C10—C9—C8 | 120.7 (2) |
| C2—C1—C6 | 121.2 (2) | C13—C9—C8 | 122.3 (2) |
| C2—C1—H1B | 119.4 | C11—C10—C9 | 119.3 (2) |
| C6—C1—H1B | 119.4 | C11—C10—H10A | 120.3 |
| C3—C2—C1 | 119.6 (2) | C9—C10—H10A | 120.3 |
| C3—C2—H2A | 120.2 | N3—C11—C10 | 124.1 (3) |
| C1—C2—H2A | 120.2 | N3—C11—H11A | 117.9 |
| O2—C3—C2 | 124.7 (2) | C10—C11—H11A | 117.9 |
| O2—C3—C4 | 115.6 (2) | N3—C12—C13 | 124.5 (3) |
| C2—C3—C4 | 119.7 (2) | N3—C12—H12A | 117.8 |
| C5—C4—C3 | 120.5 (2) | C13—C12—H12A | 117.8 |
| C5—C4—H4A | 119.8 | C12—C13—C9 | 119.0 (2) |
| C3—C4—H4A | 119.8 | C12—C13—H13A | 120.5 |
| C4—C5—C6 | 120.8 (2) | C9—C13—H13A | 120.5 |
| C4—C5—H5A | 119.6 | O2—C14—H14A | 109.5 |
| C6—C5—H5A | 119.6 | O2—C14—H14B | 109.5 |
| C1—C6—C5 | 118.2 (2) | H14A—C14—H14B | 109.5 |
| C1—C6—C7 | 124.6 (2) | O2—C14—H14C | 109.5 |
| C5—C6—C7 | 117.2 (2) | H14A—C14—H14C | 109.5 |
| O1—C7—N1 | 121.0 (2) | H14B—C14—H14C | 109.5 |
| O1—C7—C6 | 122.1 (2) | H1—O1W—H2 | 101.5 |
| C7—N1—N2—C8 | −176.5 (2) | C1—C6—C7—O1 | −169.8 (2) |
| C6—C1—C2—C3 | −0.3 (3) | C5—C6—C7—O1 | 9.2 (3) |
| C14—O2—C3—C2 | −9.1 (3) | C1—C6—C7—N1 | 10.1 (3) |
| C14—O2—C3—C4 | 171.4 (2) | C5—C6—C7—N1 | −170.9 (2) |
| C1—C2—C3—O2 | −178.8 (2) | N1—N2—C8—C9 | 178.37 (19) |
| C1—C2—C3—C4 | 0.7 (4) | N2—C8—C9—C10 | 165.7 (2) |
| O2—C3—C4—C5 | 179.1 (2) | N2—C8—C9—C13 | −14.8 (4) |
| C2—C3—C4—C5 | −0.4 (4) | C13—C9—C10—C11 | −0.2 (4) |
| C3—C4—C5—C6 | −0.3 (4) | C8—C9—C10—C11 | 179.4 (2) |
| C2—C1—C6—C5 | −0.4 (3) | C12—N3—C11—C10 | 0.8 (4) |
| C2—C1—C6—C7 | 178.6 (2) | C9—C10—C11—N3 | −0.7 (4) |
| C4—C5—C6—C1 | 0.7 (4) | C11—N3—C12—C13 | 0.1 (4) |
| C4—C5—C6—C7 | −178.4 (2) | N3—C12—C13—C9 | −1.0 (4) |
| N2—N1—C7—O1 | −2.6 (3) | C10—C9—C13—C12 | 1.0 (4) |
| N2—N1—C7—C6 | 177.42 (18) | C8—C9—C13—C12 | −178.5 (2) |
| H··· | ||||
| O1 | 0.84 | 2.00 | 2.811 (2) | 162 |
| O1 | 0.91 | 2.11 | 2.956 (3) | 154 |
| N1—H1 | 0.86 | 2.08 | 2.911 (2) | 161 |
| C1—H1 | 0.93 | 2.54 | 3.440 (3) | 162 |
| C8—H8 | 0.93 | 2.48 | 3.272 (3) | 143 |
| C11—H11 | 0.93 | 2.47 | 3.375 (3) | 165 |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| O1 | 0.84 | 2.00 | 2.811 (2) | 162 |
| O1 | 0.91 | 2.11 | 2.956 (3) | 154 |
| N1—H1 | 0.86 | 2.08 | 2.911 (2) | 161 |
| C1—H1 | 0.93 | 2.54 | 3.440 (3) | 162 |
| C8—H8 | 0.93 | 2.48 | 3.272 (3) | 143 |
| C11—H11 | 0.93 | 2.47 | 3.375 (3) | 165 |
Symmetry codes: (i) ; (ii) ; (iii) .