Literature DB >> 22969656

(E)-4-Meth-oxy-N'-[(pyridin-4-yl)methyl-idene]benzohydrazide monohydrate.

Muhammad Taha, Humera Naz, Aqilah Abd Rahman, Nor Hadiani Ismail, Yousuf Sammer.   

Abstract

In the title compound, C(14)H(13)N(3)O(2)·H(2)O, the azomethine double bond adopts an E conformation and the N-N=C-C torsion angle is 178.37 (19)°. The dihedral angle between the benzene and pyridine rings is 5.58 (12)° and the C atom of the meth-oxy group is roughly coplanar with its attached ring [deviation = 0.157 (3) Å]. In the crystal, the components are linked by O-H⋯O, O-H⋯N, N-H⋯O and C-H⋯O hydrogen bonds, forming (001) sheets. The water O atom accepts one N-H⋯O and two C-H⋯O inter-actions from the adjacent organic mol-ecule.

Entities:  

Year:  2012        PMID: 22969656      PMCID: PMC3435810          DOI: 10.1107/S1600536812034988

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of benzohydraazides, see: Bayrak et al. (2009 ▶). For the crystal structures of related benzohydrazides, see: Taha et al. (2012) ▶; Fun et al. (2011 ▶); Lu et al. (2009 ▶); Zhang (2009a ▶,b ▶).

Experimental

Crystal data

C14H13N3O2·H2O M = 273.29 Monoclinic, a = 6.6878 (5) Å b = 7.0420 (5) Å c = 29.249 (2) Å β = 94.233 (2)° V = 1373.74 (17) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 273 K 0.20 × 0.17 × 0.10 mm

Data collection

Bruker SMART APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2000 ▶) T min = 0.981, T max = 0.991 7767 measured reflections 2560 independent reflections 1548 reflections with I > 2σ(I) R int = 0.038

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.146 S = 1.03 2560 reflections 182 parameters H-atom parameters constrained Δρmax = 0.16 e Å−3 Δρmin = −0.20 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL, PARST (Nardelli, 1995 ▶) and PLATON (Spek, 2009 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536812034988/hb6930sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536812034988/hb6930Isup2.hkl Supplementary material file. DOI: 10.1107/S1600536812034988/hb6930Isup3.cml Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H13N3O2·H2OF(000) = 576
Mr = 273.29Dx = 1.321 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 6.6878 (5) ÅCell parameters from 1112 reflections
b = 7.0420 (5) Åθ = 2.8–22.8°
c = 29.249 (2) ŵ = 0.10 mm1
β = 94.233 (2)°T = 273 K
V = 1373.74 (17) Å3Block, colourless
Z = 40.20 × 0.17 × 0.10 mm
Bruker SMART APEX CCD diffractometer2560 independent reflections
Radiation source: fine-focus sealed tube1548 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.038
ω scanθmax = 25.5°, θmin = 1.4°
Absorption correction: multi-scan (SADABS; Bruker, 2000)h = −8→8
Tmin = 0.981, Tmax = 0.991k = −7→8
7767 measured reflectionsl = −35→35
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.047Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.146H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.070P)2] where P = (Fo2 + 2Fc2)/3
2560 reflections(Δ/σ)max < 0.001
182 parametersΔρmax = 0.16 e Å3
0 restraintsΔρmin = −0.20 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.0974 (2)0.3345 (3)0.05572 (5)0.0607 (6)
O20.6325 (2)0.1818 (3)−0.10876 (5)0.0590 (5)
N10.3945 (3)0.3260 (3)0.09758 (6)0.0446 (5)
H1A0.52200.30830.09850.053*
N20.3018 (3)0.3646 (3)0.13646 (6)0.0436 (5)
N30.1587 (4)0.5223 (4)0.29858 (7)0.0662 (7)
C10.5874 (3)0.2320 (3)0.01504 (7)0.0413 (6)
H1B0.66400.22060.04280.050*
C20.6754 (3)0.1988 (3)−0.02547 (7)0.0424 (6)
H2A0.81020.1659−0.02500.051*
C30.5623 (3)0.2146 (3)−0.06665 (7)0.0424 (6)
C40.3619 (3)0.2658 (4)−0.06705 (8)0.0513 (7)
H4A0.28580.2773−0.09480.062*
C50.2756 (3)0.2993 (3)−0.02691 (8)0.0462 (6)
H5A0.14120.3340−0.02770.055*
C60.3867 (3)0.2821 (3)0.01516 (7)0.0380 (5)
C70.2800 (3)0.3160 (3)0.05702 (7)0.0411 (6)
C80.4126 (4)0.3827 (4)0.17334 (7)0.0469 (6)
H8A0.55060.36630.17320.056*
C90.3230 (3)0.4292 (3)0.21603 (7)0.0429 (6)
C100.4319 (4)0.4088 (4)0.25789 (8)0.0544 (7)
H10A0.56300.36390.25920.065*
C110.3438 (5)0.4556 (4)0.29754 (9)0.0650 (8)
H11A0.41890.43950.32530.078*
C120.0554 (4)0.5413 (4)0.25821 (9)0.0580 (7)
H12A−0.07470.58800.25800.070*
C130.1279 (4)0.4965 (4)0.21676 (8)0.0499 (6)
H13A0.04760.51100.18960.060*
C140.8422 (4)0.1550 (5)−0.11117 (9)0.0640 (8)
H14A0.87060.1333−0.14240.096*
H14B0.88520.0473−0.09290.096*
H14C0.91240.2663−0.09980.096*
O1W0.8218 (2)0.2877 (3)0.12291 (5)0.0657 (6)
H10.92240.29940.10780.098*
H20.87000.21030.14610.098*
U11U22U33U12U13U23
O10.0361 (10)0.1027 (16)0.0440 (10)0.0027 (10)0.0085 (7)0.0049 (9)
O20.0496 (10)0.0914 (15)0.0373 (9)−0.0042 (10)0.0115 (8)−0.0133 (9)
N10.0347 (10)0.0645 (15)0.0357 (11)0.0026 (10)0.0104 (8)0.0015 (9)
N20.0415 (11)0.0552 (13)0.0352 (11)0.0018 (10)0.0111 (9)0.0016 (9)
N30.0749 (17)0.0805 (18)0.0450 (14)−0.0011 (14)0.0167 (12)−0.0098 (12)
C10.0384 (13)0.0493 (15)0.0358 (12)0.0007 (11)0.0012 (10)0.0032 (10)
C20.0360 (13)0.0508 (16)0.0410 (13)0.0012 (11)0.0057 (10)−0.0028 (11)
C30.0419 (13)0.0485 (15)0.0378 (13)−0.0085 (11)0.0102 (10)−0.0054 (11)
C40.0428 (14)0.075 (2)0.0359 (14)−0.0049 (13)−0.0009 (10)−0.0017 (12)
C50.0340 (13)0.0624 (18)0.0424 (14)−0.0034 (12)0.0034 (10)0.0007 (12)
C60.0378 (12)0.0403 (14)0.0366 (12)−0.0053 (11)0.0068 (9)0.0025 (10)
C70.0370 (13)0.0488 (16)0.0379 (13)−0.0027 (11)0.0057 (10)0.0049 (11)
C80.0394 (13)0.0605 (17)0.0416 (14)0.0046 (12)0.0084 (11)0.0005 (12)
C90.0454 (14)0.0469 (16)0.0370 (13)−0.0016 (12)0.0074 (10)0.0001 (11)
C100.0537 (15)0.0636 (19)0.0456 (15)0.0042 (14)0.0016 (11)−0.0006 (13)
C110.081 (2)0.077 (2)0.0368 (15)0.0004 (17)0.0010 (13)−0.0006 (13)
C120.0553 (16)0.0642 (19)0.0560 (17)−0.0004 (14)0.0137 (13)−0.0108 (14)
C130.0504 (15)0.0574 (17)0.0423 (14)0.0025 (13)0.0059 (11)−0.0048 (12)
C140.0565 (17)0.087 (2)0.0516 (16)0.0062 (16)0.0226 (13)−0.0059 (14)
O1W0.0371 (9)0.1143 (17)0.0465 (10)0.0079 (10)0.0095 (7)0.0166 (10)
O1—C71.226 (2)C5—H5A0.9300
O2—C31.370 (3)C6—C71.481 (3)
O2—C141.422 (3)C8—C91.462 (3)
N1—N21.362 (2)C8—H8A0.9300
N1—C71.365 (3)C9—C101.385 (3)
N1—H1A0.8600C9—C131.390 (3)
N2—C81.269 (3)C10—C111.379 (3)
N3—C111.326 (3)C10—H10A0.9300
N3—C121.330 (3)C11—H11A0.9300
C1—C21.382 (3)C12—C131.375 (3)
C1—C61.388 (3)C12—H12A0.9300
C1—H1B0.9300C13—H13A0.9300
C2—C31.379 (3)C14—H14A0.9600
C2—H2A0.9300C14—H14B0.9600
C3—C41.387 (3)C14—H14C0.9600
C4—C51.367 (3)O1W—H10.8361
C4—H4A0.9300O1W—H20.9098
C5—C61.395 (3)
C3—O2—C14118.14 (18)N1—C7—C6116.9 (2)
N2—N1—C7118.33 (18)N2—C8—C9119.9 (2)
N2—N1—H1A120.8N2—C8—H8A120.1
C7—N1—H1A120.8C9—C8—H8A120.1
C8—N2—N1117.12 (19)C10—C9—C13117.0 (2)
C11—N3—C12116.1 (2)C10—C9—C8120.7 (2)
C2—C1—C6121.2 (2)C13—C9—C8122.3 (2)
C2—C1—H1B119.4C11—C10—C9119.3 (2)
C6—C1—H1B119.4C11—C10—H10A120.3
C3—C2—C1119.6 (2)C9—C10—H10A120.3
C3—C2—H2A120.2N3—C11—C10124.1 (3)
C1—C2—H2A120.2N3—C11—H11A117.9
O2—C3—C2124.7 (2)C10—C11—H11A117.9
O2—C3—C4115.6 (2)N3—C12—C13124.5 (3)
C2—C3—C4119.7 (2)N3—C12—H12A117.8
C5—C4—C3120.5 (2)C13—C12—H12A117.8
C5—C4—H4A119.8C12—C13—C9119.0 (2)
C3—C4—H4A119.8C12—C13—H13A120.5
C4—C5—C6120.8 (2)C9—C13—H13A120.5
C4—C5—H5A119.6O2—C14—H14A109.5
C6—C5—H5A119.6O2—C14—H14B109.5
C1—C6—C5118.2 (2)H14A—C14—H14B109.5
C1—C6—C7124.6 (2)O2—C14—H14C109.5
C5—C6—C7117.2 (2)H14A—C14—H14C109.5
O1—C7—N1121.0 (2)H14B—C14—H14C109.5
O1—C7—C6122.1 (2)H1—O1W—H2101.5
C7—N1—N2—C8−176.5 (2)C1—C6—C7—O1−169.8 (2)
C6—C1—C2—C3−0.3 (3)C5—C6—C7—O19.2 (3)
C14—O2—C3—C2−9.1 (3)C1—C6—C7—N110.1 (3)
C14—O2—C3—C4171.4 (2)C5—C6—C7—N1−170.9 (2)
C1—C2—C3—O2−178.8 (2)N1—N2—C8—C9178.37 (19)
C1—C2—C3—C40.7 (4)N2—C8—C9—C10165.7 (2)
O2—C3—C4—C5179.1 (2)N2—C8—C9—C13−14.8 (4)
C2—C3—C4—C5−0.4 (4)C13—C9—C10—C11−0.2 (4)
C3—C4—C5—C6−0.3 (4)C8—C9—C10—C11179.4 (2)
C2—C1—C6—C5−0.4 (3)C12—N3—C11—C100.8 (4)
C2—C1—C6—C7178.6 (2)C9—C10—C11—N3−0.7 (4)
C4—C5—C6—C10.7 (4)C11—N3—C12—C130.1 (4)
C4—C5—C6—C7−178.4 (2)N3—C12—C13—C9−1.0 (4)
N2—N1—C7—O1−2.6 (3)C10—C9—C13—C121.0 (4)
N2—N1—C7—C6177.42 (18)C8—C9—C13—C12−178.5 (2)
D—H···AD—HH···AD···AD—H···A
O1W—H1···O1i0.842.002.811 (2)162
O1W—H2···N3ii0.912.112.956 (3)154
N1—H1A···O1W0.862.082.911 (2)161
C1—H1B···O1W0.932.543.440 (3)162
C8—H8A···O1W0.932.483.272 (3)143
C11—H11A···O2iii0.932.473.375 (3)165
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1W—H1⋯O1i 0.842.002.811 (2)162
O1W—H2⋯N3ii 0.912.112.956 (3)154
N1—H1A⋯O1W 0.862.082.911 (2)161
C1—H1B⋯O1W 0.932.543.440 (3)162
C8—H8A⋯O1W 0.932.483.272 (3)143
C11—H11A⋯O2iii 0.932.473.375 (3)165

Symmetry codes: (i) ; (ii) ; (iii) .

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