Literature DB >> 24764665

Advances in epigenetic biomarker research in colorectal cancer.

Xi Wang1, Ye-Ye Kuang1, Xiao-Tong Hu1.   

Abstract

Colorectal cancer (CRC) causes approximately 600000 deaths annually and is the third leading cause of cancer mortality worldwide. Despite significant advancements in treatment options, CRC patient survival is still poor owing to a lack of effective tools for early diagnosis and a limited capacity for optimal therapeutic decision making. Since there exists a need to find new biomarkers to improve diagnosis of CRC, the research on epigenetic biomarkers for molecular diagnostics encourages the translation of this field from the bench to clinical practice. Epigenetic alterations are thought to hold great promise as tumor biomarkers. In this review, we will primarily focus on recent advances in the study of epigenetic biomarkers for colorectal cancer and discuss epigenetic biomarkers, including DNA methylation, microRNA expression and histone modification, in cancer tissue, stool, plasma, serum, cell lines and xenografts. These studies have improved the chances that epigenetic biomarkers will find a place in the clinical practices of screening, early diagnosis, prognosis, therapy choice and recurrence surveillance for CRC patients. However, these studies have typically been small in size, and evaluation at a larger scale of well-controlled randomized clinical trials is the next step that is necessary to increase the quality of epigenetic biomarkers and ensure their widespread clinical use.

Entities:  

Keywords:  Colorectal cancer; DNA methylation; Epigenetic biomarker; Histone modification; MicroRNA biomarker

Mesh:

Substances:

Year:  2014        PMID: 24764665      PMCID: PMC3989963          DOI: 10.3748/wjg.v20.i15.4276

Source DB:  PubMed          Journal:  World J Gastroenterol        ISSN: 1007-9327            Impact factor:   5.742


  95 in total

1.  DNA methylation of phosphatase and actin regulator 3 detects colorectal cancer in stool and complements FIT.

Authors:  Linda J W Bosch; Frank A Oort; Maarten Neerincx; Carolina A J Khalid-de Bakker; Jochim S Terhaar sive Droste; Veerle Melotte; Daisy M A E Jonkers; Ad A M Masclee; Sandra Mongera; Madeleine Grooteclaes; Joost Louwagie; Wim van Criekinge; Veerle M H Coupé; Chris J Mulder; Manon van Engeland; Beatriz Carvalho; Gerrit A Meijer
Journal:  Cancer Prev Res (Phila)       Date:  2011-12-01

2.  Circulating miR-221 directly amplified from plasma is a potential diagnostic and prognostic marker of colorectal cancer and is correlated with p53 expression.

Authors:  Xing-xiang Pu; Guo-liang Huang; Hong-qiang Guo; Cheng-cheng Guo; Haoran Li; Shen Ye; Suxia Ling; Li Jiang; Ying Tian; Tong-yu Lin
Journal:  J Gastroenterol Hepatol       Date:  2010-10       Impact factor: 4.029

3.  DNA methylation biomarker candidates for early detection of colon cancer.

Authors:  Joo Mi Yi; Mashaal Dhir; Angela A Guzzetta; Christine A Iacobuzio-Donahue; Kyu Heo; Kwang Mo Yang; Hiromu Suzuki; Minoru Toyota; Hwan-Mook Kim; Nita Ahuja
Journal:  Tumour Biol       Date:  2012-01-12

4.  Analysis of promoter methylation in stool: a novel method for the detection of colorectal cancer.

Authors:  Konstanze Lenhard; Guido T Bommer; Silke Asutay; Rolf Schauer; Thomas Brabletz; Burkhard Göke; Rolf Lamerz; Frank T Kolligs
Journal:  Clin Gastroenterol Hepatol       Date:  2005-02       Impact factor: 11.382

5.  Detection of hypermethylated vimentin in urine of patients with colorectal cancer.

Authors:  Benjamin P Song; Surbhi Jain; Selena Y Lin; Quan Chen; Timothy M Block; Wei Song; Dean E Brenner; Ying-Hsiu Su
Journal:  J Mol Diagn       Date:  2012-01-16       Impact factor: 5.568

6.  Global histone modification of H3K27 correlates with the outcomes in patients with metachronous liver metastasis of colorectal cancer.

Authors:  H Tamagawa; T Oshima; M Numata; N Yamamoto; M Shiozawa; S Morinaga; Y Nakamura; M Yoshihara; Y Sakuma; Y Kameda; M Akaike; N Yukawa; Y Rino; M Masuda; Y Miyagi
Journal:  Eur J Surg Oncol       Date:  2013-03-21       Impact factor: 4.424

7.  Promoter DNA methylation of oncostatin m receptor-beta as a novel diagnostic and therapeutic marker in colon cancer.

Authors:  Myoung Sook Kim; Joost Louwagie; Beatriz Carvalho; Jochim S Terhaar Sive Droste; Hannah Lui Park; Young Kwang Chae; Keishi Yamashita; Junwei Liu; Kimberly Laskie Ostrow; Shizhang Ling; Rafael Guerrero-Preston; Semra Demokan; Zubeyde Yalniz; Nejat Dalay; Gerrit A Meijer; Wim Van Criekinge; David Sidransky
Journal:  PLoS One       Date:  2009-08-07       Impact factor: 3.240

8.  Stool DNA and occult blood testing for screen detection of colorectal neoplasia.

Authors:  David A Ahlquist; Daniel J Sargent; Charles L Loprinzi; Theodore R Levin; Douglas K Rex; Dennis J Ahnen; Kandice Knigge; M Peter Lance; Lawrence J Burgart; Stanley R Hamilton; James E Allison; Michael J Lawson; Mary E Devens; Jonathan J Harrington; Shauna L Hillman
Journal:  Ann Intern Med       Date:  2008-10-07       Impact factor: 25.391

9.  A simplified, noninvasive stool DNA test for colorectal cancer detection.

Authors:  Steven Itzkowitz; Randall Brand; Lina Jandorf; Kris Durkee; John Millholland; Linda Rabeneck; Paul C Schroy; Stephen Sontag; David Johnson; Sanford Markowitz; Lawrence Paszat; Barry M Berger
Journal:  Am J Gastroenterol       Date:  2008-08-27       Impact factor: 10.864

10.  Highly methylated genes in colorectal neoplasia: implications for screening.

Authors:  Hongzhi Zou; Jonathan J Harrington; Abdirashid M Shire; Rafaela L Rego; Liang Wang; Megan E Campbell; Ann L Oberg; David A Ahlquist
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2007-12       Impact factor: 4.254

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  23 in total

Review 1.  Fecal DNA testing for colorectal cancer screening: Molecular targets and perspectives.

Authors:  Amaninder Dhaliwal; Panagiotis J Vlachostergios; Katerina G Oikonomou; Yitzchak Moshenyat
Journal:  World J Gastrointest Oncol       Date:  2015-10-15

2.  Differential expression of alternatively spliced transcripts related to energy metabolism in colorectal cancer.

Authors:  Anastasiya Vladimirovna Snezhkina; George Sergeevich Krasnov; Andrew Rostislavovich Zaretsky; Alex Zhavoronkov; Kirill Mikhailovich Nyushko; Alexey Alexandrovich Moskalev; Irina Yurievna Karpova; Anastasiya Isaevna Afremova; Anastasiya Valerievna Lipatova; Dmitriy Vladimitovich Kochetkov; Maria Sergeena Fedorova; Nadezhda Nikolaevna Volchenko; Asiya Fayazovna Sadritdinova; Nataliya Vladimirovna Melnikova; Dmitry Vladimirovich Sidorov; Anatoly Yurievich Popov; Dmitry Valerievich Kalinin; Andrey Dmitrievich Kaprin; Boris Yakovlevich Alekseev; Alexey Alexandrovich Dmitriev; Anna Viktorovna Kudryavtseva
Journal:  BMC Genomics       Date:  2016-12-28       Impact factor: 3.969

Review 3.  Early detection of colorectal cancer: from conventional methods to novel biomarkers.

Authors:  Nasimeh Vatandoost; Jahanafrooz Ghanbari; Mahboobeh Mojaver; Amir Avan; Majid Ghayour-Mobarhan; Reza Nedaeinia; Rasoul Salehi
Journal:  J Cancer Res Clin Oncol       Date:  2015-02-17       Impact factor: 4.553

4.  Detection of aberrant methylated SEPT9 and NTRK3 genes in sporadic colorectal cancer patients as a potential diagnostic biomarker.

Authors:  Shahin Behrouz Sharif; Shahriar Hashemzadeh; Reza Mousavi Ardehaie; Amirtaher Eftekharsadat; Mortaza Ghojazadeh; Amir Hossein Mehrtash; Mehrdad Asghari Estiar; Ladan Teimoori-Toolabi; Ebrahim Sakhinia
Journal:  Oncol Lett       Date:  2016-10-31       Impact factor: 2.967

5.  Locked nucleic acid anti-miR-21 inhibits cell growth and invasive behaviors of a colorectal adenocarcinoma cell line: LNA-anti-miR as a novel approach.

Authors:  R Nedaeinia; M Sharifi; A Avan; M Kazemi; L Rafiee; M Ghayour-Mobarhan; R Salehi
Journal:  Cancer Gene Ther       Date:  2016-07-01       Impact factor: 5.987

Review 6.  Stool DNA methylation assays in colorectal cancer screening.

Authors:  Tanya Kadiyska; Alexander Nossikoff
Journal:  World J Gastroenterol       Date:  2015-09-21       Impact factor: 5.742

7.  MiR-130b-3p promotes colorectal cancer progression by targeting CHD9.

Authors:  Dan Song; Qian Zhang; Hao Zhang; Liangliang Zhan; Xinchen Sun
Journal:  Cell Cycle       Date:  2022-01-31       Impact factor: 4.534

8.  Detection of SNCA and FBN1 methylation in the stool as a biomarker for colorectal cancer.

Authors:  Wen-han Li; Hao Zhang; Qi Guo; Xuan-di Wu; Zi-sen Xu; Cheng-xue Dang; Peng Xia; Yong-chun Song
Journal:  Dis Markers       Date:  2015-02-23       Impact factor: 3.434

9.  Global analysis of DNA methylation in hepatocellular carcinoma by a liquid hybridization capture-based bisulfite sequencing approach.

Authors:  Fei Gao; Huifang Liang; Hanlin Lu; Junwen Wang; Meng Xia; Zhimei Yuan; Yu Yao; Tong Wang; Xiaolong Tan; Arian Laurence; Hua Xu; Jingjing Yu; Wei Xiao; Wei Chen; Ming Zhou; Xiuqing Zhang; Qian Chen; Xiaoping Chen
Journal:  Clin Epigenetics       Date:  2015-08-21       Impact factor: 6.551

10.  An hTERT/ZEB1 complex directly regulates E-cadherin to promote epithelial-to-mesenchymal transition (EMT) in colorectal cancer.

Authors:  Yong Qin; Bo Tang; Chang-Jiang Hu; Yu-Feng Xiao; Rui Xie; Xin Yong; Yu Yun Wu; Hui Dong; Shi-Ming Yang
Journal:  Oncotarget       Date:  2016-01-05
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