Literature DB >> 2476217

DNA methylation and cell memory.

A D Riggs1.   

Abstract

In this paper we address the question: How do replicating mammalian cells remember with high fidelity their proper state of differentiation? Several possible mechanisms for cell memory are discussed, and it is concluded that only mechanisms involving DNA methylation are supported by strong experimental evidence. This evidence is reviewed. The establishment and modulation of methylation patterns are discussed and a hemimethylation model for stem cells is presented. The overall conclusion is that, although little is yet known about the details, there should be little doubt about the existence of a methylation system functioning at least to aid cell memory.

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Year:  1989        PMID: 2476217     DOI: 10.1007/bf02991574

Source DB:  PubMed          Journal:  Cell Biophys        ISSN: 0163-4992


  36 in total

1.  DNA modification mechanisms and gene activity during development.

Authors:  R Holliday; J E Pugh
Journal:  Science       Date:  1975-01-24       Impact factor: 47.728

2.  Genomic sequencing reveals a positive correlation between the kinetics of strand-specific DNA demethylation of the overlapping estradiol/glucocorticoid-receptor binding sites and the rate of avian vitellogenin mRNA synthesis.

Authors:  H P Saluz; J Jiricny; J P Jost
Journal:  Proc Natl Acad Sci U S A       Date:  1986-10       Impact factor: 11.205

3.  Muscle-specific activation of a methylated chimeric actin gene.

Authors:  J Yisraeli; R S Adelstein; D Melloul; U Nudel; D Yaffe; H Cedar
Journal:  Cell       Date:  1986-08-01       Impact factor: 41.582

4.  Genomic sequencing.

Authors:  G M Church; W Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  1984-04       Impact factor: 11.205

5.  The role of stable complexes that repress and activate eucaryotic genes.

Authors:  D D Brown
Journal:  Cell       Date:  1984-06       Impact factor: 41.582

6.  Substrate and sequence specificity of a eukaryotic DNA methylase.

Authors:  Y Gruenbaum; H Cedar; A Razin
Journal:  Nature       Date:  1982-02-18       Impact factor: 49.962

7.  Use of restriction enzymes to study eukaryotic DNA methylation: II. The symmetry of methylated sites supports semi-conservative copying of the methylation pattern.

Authors:  A P Bird
Journal:  J Mol Biol       Date:  1978-01-05       Impact factor: 5.469

8.  DNA replication in vitro erases a Xenopus 5S RNA gene transcription complex.

Authors:  A P Wolffe; D D Brown
Journal:  Cell       Date:  1986-10-24       Impact factor: 41.582

9.  Genomic imprinting determines methylation of parental alleles in transgenic mice.

Authors:  W Reik; A Collick; M L Norris; S C Barton; M A Surani
Journal:  Nature       Date:  1987 Jul 16-22       Impact factor: 49.962

10.  Caenorhabditis elegans DNA does not contain 5-methylcytosine at any time during development or aging.

Authors:  V J Simpson; T E Johnson; R F Hammen
Journal:  Nucleic Acids Res       Date:  1986-08-26       Impact factor: 16.971

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  15 in total

1.  Strand-biased DNA methylation associated with centromeric regions in Arabidopsis.

Authors:  Song Luo; Daphne Preuss
Journal:  Proc Natl Acad Sci U S A       Date:  2003-09-05       Impact factor: 11.205

2.  Polymerase chain reaction-aided genomic sequencing of an X chromosome-linked CpG island: methylation patterns suggest clonal inheritance, CpG site autonomy, and an explanation of activity state stability.

Authors:  G P Pfeifer; S D Steigerwald; R S Hansen; S M Gartler; A D Riggs
Journal:  Proc Natl Acad Sci U S A       Date:  1990-11       Impact factor: 11.205

Review 3.  The new field of epigenomics: implications for cancer and other common disease research.

Authors:  H T Bjornsson; H Cui; D Gius; M D Fallin; A P Feinberg
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2004

4.  Use of a HpaII-polymerase chain reaction assay to study DNA methylation in the Pgk-1 CpG island of mouse embryos at the time of X-chromosome inactivation.

Authors:  J Singer-Sam; M Grant; J M LeBon; K Okuyama; V Chapman; M Monk; A D Riggs
Journal:  Mol Cell Biol       Date:  1990-09       Impact factor: 4.272

5.  Epigenomic profiling reveals an association between persistence of DNA methylation and metabolic memory in the DCCT/EDIC type 1 diabetes cohort.

Authors:  Zhuo Chen; Feng Miao; Andrew D Paterson; John M Lachin; Lingxiao Zhang; Dustin E Schones; Xiwei Wu; Jinhui Wang; Joshua D Tompkins; Saul Genuth; Barbara H Braffett; Arthur D Riggs; Rama Natarajan
Journal:  Proc Natl Acad Sci U S A       Date:  2016-05-09       Impact factor: 11.205

6.  Inferring epigenetic dynamics from kin correlations.

Authors:  Sahand Hormoz; Nicolas Desprat; Boris I Shraiman
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-22       Impact factor: 11.205

7.  Protein binding protects sites on stable episomes and in the chromosome from de novo methylation.

Authors:  L Han; I G Lin; C L Hsieh
Journal:  Mol Cell Biol       Date:  2001-05       Impact factor: 4.272

8.  Epigenetic stability, adaptability, and reversibility in human embryonic stem cells.

Authors:  Joshua D Tompkins; Christine Hall; Vincent Chang-yi Chen; Arthur Xuejun Li; Xiwei Wu; David Hsu; Larry A Couture; Arthur D Riggs
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-16       Impact factor: 11.205

Review 9.  Biology of DNA restriction.

Authors:  T A Bickle; D H Krüger
Journal:  Microbiol Rev       Date:  1993-06

10.  Metaphase chromosome analysis by ligation-mediated PCR: heritable chromatin structure and a comparison of active and inactive X chromosomes.

Authors:  M Hershkovitz; A D Riggs
Journal:  Proc Natl Acad Sci U S A       Date:  1995-03-14       Impact factor: 11.205

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