Literature DB >> 24761039

Disentangling the Trichoderma viridescens complex.

W M Jaklitsch1, G J Samuels2, A Ismaiel3, H Voglmayr1.   

Abstract

Trichoderma viridescens is recognised as a species complex. Multigene analyses based on the translation elongation factor 1-alpha encoding gene (tef1), a part of the rpb2 gene, encoding the second largest RNA polymerase subunit and the larger subunit of ATP citrate lyase (acl1) reveals 13 phylogenetic species with little or no phenotypic differentiation. This is the first use of acl1 in Trichoderma phylogenetics. The typification of T. viridescens s.str. is clarified and Hypocrea viridescens is replaced by the new name T. paraviridescens. Besides these two species, eleven are phylogenetically recognised and T. olivascens, T. viridarium, T. virilente, T. trixiae, T. viridialbum, T. appalachiense, T. neosinense, T. composticola, T. nothescens and T. sempervirentis are formally described and illustrated. Several species produce yellow diffusing pigment on cornmeal dextrose agar, particularly after storage at 15 °C, while T. olivascens is characterised by the formation of an olivaceous pigment. The results are compared with earlier publications on this group of species.

Entities:  

Keywords:  Hypocrea; Hypocreaceae; acl1; phylogenetic analysis; rpb2; systematics; tef1

Year:  2013        PMID: 24761039      PMCID: PMC3904046          DOI: 10.3767/003158513X672234

Source DB:  PubMed          Journal:  Persoonia        ISSN: 0031-5850            Impact factor:   11.051


  33 in total

Review 1.  Phylogenetic species recognition and species concepts in fungi.

Authors:  J W Taylor; D J Jacobson; S Kroken; T Kasuga; D M Geiser; D S Hibbett; M C Fisher
Journal:  Fungal Genet Biol       Date:  2000-10       Impact factor: 3.495

2.  MRBAYES: Bayesian inference of phylogenetic trees.

Authors:  J P Huelsenbeck; F Ronquist
Journal:  Bioinformatics       Date:  2001-08       Impact factor: 6.937

3.  Trichoderma asperellum sensu lato consists of two cryptic species.

Authors:  Gary J Samuels; Adnan Ismaiel; Marie-Claude Bon; Sophie De Respinis; Orlando Petrini
Journal:  Mycologia       Date:  2010 Jul-Aug       Impact factor: 2.696

4.  Trichoderma martiale sp. nov., a new endophyte from sapwood of Theobroma cacao with a potential for biological control.

Authors:  Rogério E Hanada; T de Jorge Souza; Alan W V Pomella; K Prakash Hebbar; José O Pereira; Adnan Ismaiel; Gary J Samuels
Journal:  Mycol Res       Date:  2008-07-11

5.  Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees.

Authors:  K Tamura; M Nei
Journal:  Mol Biol Evol       Date:  1993-05       Impact factor: 16.240

6.  The Trichoderma koningii aggregate species.

Authors:  Gary J Samuels; Sarah L Dodd; Bing-Sheng Lu; Orlando Petrini; Hans-Josef Schroers; Irina S Druzhinina
Journal:  Stud Mycol       Date:  2006       Impact factor: 16.097

7.  Fungal diversity in the rhizosphere of endemic plant species of Tenerife (Canary Islands): relationship to vegetation zones and environmental factors.

Authors:  Christin Zachow; Christian Berg; Henry Müller; Remo Meincke; Monika Komon-Zelazowska; Irina S Druzhinina; Christian P Kubicek; Gabriele Berg
Journal:  ISME J       Date:  2008-10-02       Impact factor: 10.302

8.  European species of Hypocrea part II: species with hyaline ascospores.

Authors:  Walter M Jaklitsch
Journal:  Fungal Divers       Date:  2011-05       Impact factor: 20.372

9.  Blue pigment in Hypocrea caerulescens sp. nov. and two additional new species in sect. Trichoderma.

Authors:  Walter M Jaklitsch; Marc Stadler; Hermann Voglmayr
Journal:  Mycologia       Date:  2012-03-27       Impact factor: 2.696

10.  Species diversity of Trichoderma in Poland.

Authors:  Lidia Błaszczyk; Delfina Popiel; Jerzy Chełkowski; Grzegorz Koczyk; Gary J Samuels; Krzysztof Sobieralski; Marek Siwulski
Journal:  J Appl Genet       Date:  2011-04-05       Impact factor: 3.240

View more
  12 in total

1.  Biodiversity of Trichoderma (Hypocreaceae) in Southern Europe and Macaronesia.

Authors:  W M Jaklitsch; H Voglmayr
Journal:  Stud Mycol       Date:  2015-01-22       Impact factor: 16.097

2.  MIST: a Multilocus Identification System for Trichoderma.

Authors:  Kai Dou; Zhixiang Lu; Qiong Wu; Mi Ni; Chuanjin Yu; Meng Wang; Yaqian Li; Xinhua Wang; Huilan Xie; Jie Chen; Chulong Zhang
Journal:  Appl Environ Microbiol       Date:  2020-09-01       Impact factor: 4.792

3.  Seven wood-inhabiting new species of the genus Trichoderma (Fungi, Ascomycota) in Viride clade.

Authors:  Wen-Tao Qin; Wen-Ying Zhuang
Journal:  Sci Rep       Date:  2016-06-01       Impact factor: 4.379

4.  Improving taxonomic accuracy for fungi in public sequence databases: applying 'one name one species' in well-defined genera with Trichoderma/Hypocrea as a test case.

Authors:  Barbara Robbertse; Pooja K Strope; Priscila Chaverri; Romina Gazis; Stacy Ciufo; Michael Domrachev; Conrad L Schoch
Journal:  Database (Oxford)       Date:  2017-01-01       Impact factor: 3.451

5.  Discovery from a large-scaled survey of Trichoderma in soil of China.

Authors:  Kai Chen; Wen-Ying Zhuang
Journal:  Sci Rep       Date:  2017-08-22       Impact factor: 4.379

6.  Diversity and effect of Trichoderma isolated from the roots of Pinus densiflora within the fairy ring of pine mushroom (Tricholoma matsutake).

Authors:  Seung-Yoon Oh; Myung Soo Park; Hae Jin Cho; Young Woon Lim
Journal:  PLoS One       Date:  2018-11-07       Impact factor: 3.240

7.  Trichoderma (Hypocrea) species with green ascospores from China.

Authors:  Z X Zhu; W Y Zhuang
Journal:  Persoonia       Date:  2015-01-08       Impact factor: 11.051

8.  Front line defenders of the ecological niche! Screening the structural diversity of peptaibiotics from saprotrophic and fungicolous Trichoderma/Hypocrea species.

Authors:  Christian R Röhrich; Walter M Jaklitsch; Hermann Voglmayr; Anita Iversen; Andreas Vilcinskas; Kristian Fog Nielsen; Ulf Thrane; Hans von Döhren; Hans Brückner; Thomas Degenkolb
Journal:  Fungal Divers       Date:  2014-11-01       Impact factor: 20.372

9.  Trichoderma species occurring on wood with decay symptoms in mountain forests in Central Europe: genetic and enzymatic characterization.

Authors:  Lidia Błaszczyk; Judyta Strakowska; Jerzy Chełkowski; Agnieszka Gąbka-Buszek; Joanna Kaczmarek
Journal:  J Appl Genet       Date:  2015-11-19       Impact factor: 3.240

10.  Juglanconis gen. nov. on Juglandaceae, and the new family Juglanconidaceae (Diaporthales).

Authors:  H Voglmayr; L A Castlebury; W M Jaklitsch
Journal:  Persoonia       Date:  2017-01-19       Impact factor: 11.051

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.