| Literature DB >> 24761036 |
J L Alves1, J H C Woudenberg2, L L Duarte1, P W Crous3, R W Barreto1.
Abstract
Alternariaster was erected in 2007 to accommodate Alternaria helianthi, a fungal species known to cause leaf spots on Helianthus annuus (sunflower). It was segregated from Alternaria based on conidial morphology. Recently an unknown alternaria-like dematiaceous fungus was found associated with leaf spots on Bidens sulphurea (yellow cosmos) in Brazil. Based on a multi-gene phylogeny of parts of the ITS and LSU genes, this fungus was placed within the Leptosphaeriaceae with Alternariaster helianthi as its closest neighbour. Additional genes sequenced, RPB2 and GAPDH, confirmed this close relationship. The fungus on B. sulphurea has smaller conidia, 50-97.5 × 12.5-20 μm, compared to Al. helianthi, 80-160 × 18-30 μm, and lacks oblique or transverse septa which can be present in Al. helianthi. Pathogenicity studies on 18 plant species belonging to the Compositae showed that the B. sulphurea fungus only infected B. sulphurea, whereas Al. helianthi infected H. annuus and Galinsoga quadriradiata, a yet unreported host of Al. helianthi. The fungus causing disease on B. sulphurea is hence closely related but phylogenetically, morphologically and pathologically distinct from Al. helianthi, and therefore newly described as Alternariaster bidentis. The collection of a second species in the genus Alternariaster and the multigene phylogenetic analysis of these two species, confirmed Alternariaster to be a well-delimited genus in the Leptosphaeriaceae rather than the Pleosporaceae, to which Alternaria belongs.Entities:
Keywords: Alternaria; fungal pathogens; host-range; multi-gene phylogeny
Year: 2013 PMID: 24761036 PMCID: PMC3904054 DOI: 10.3767/003158513X669030
Source DB: PubMed Journal: Persoonia ISSN: 0031-5850 Impact factor: 11.051
Isolates used in this study and GenBank accession numbers for sequences. Bold accession numbers were generated in this study.
| Species name | CBS no. | Other no. | Host, substrate | Country | GenBank accession no. | |||
|---|---|---|---|---|---|---|---|---|
| ITS | LSU | RPB2 | GAPDH | |||||
| CBS 134021 | VIC 31814; COAD 364 | Brazil | ||||||
| CBS 134185 | VIC 31881; COAD 1191 | Brazil | ||||||
| CBS 327.69 | IFO 9089 | Unknown | KC584369 | KC584494 | ||||
| CBS 199.86 | Hungary | |||||||
| CBS 119672 | EGS 36.007 | USA | KC584368 | KC584493 | ||||
| CBS 134018 | VIC 31838; COAD 1190 | Brazil | ||||||
| CBS 134019 | VIC 31926; COAD 1188 | Brazil | ||||||
| CBS 134020 | VIC 31927; COAD 1187 | Brazil | ||||||
| CBS 105.91 | Germany | JF740181 | GQ387594 | |||||
| CBS 124140 | IMI 217262 | India | JF740183 | GQ387611 | ||||
| CBS 124141 | Zimbabwe | JF740185 | GQ387598 | |||||
| CBS 353.65 | IMI 113689; ATCC 16207 | Saline soil | India | JF740187 | JF740268 | |||
| CBS 400.71 | Italy | AY720708 | EU754153 | |||||
| CBS 188.71 | Air | Finland | JF740188 | GQ387599 | ||||
| CBS 101636 | PD 86/1186 | Zimbabwe | JF740190 | GQ387601 | ||||
| CBS 363.93 | Netherlands | JF740191 | GQ387606 | |||||
| CBS 448.68 | Netherlands | FJ427023 | EU754187 | |||||
| CBS 165.78 | PD 77/884 | Peru | JF740204 | JF740281 | ||||
| CBS 616.75 | IMI 199777; ATCC 32813; PD 74/56 | Netherlands | JF740201 | JF740279 | ||||
| CBS 541.66 | PD 66/221 | Netherlands | JF740206 | JF740284 | ||||
| CBS 617.75 | IMI 199775; ATCC 32814; PD 74/201 | Netherlands | JF740216 | JF740289 | ||||
| CBS 125980 | DAOM 216539; PD 95/1483 | Canada | JF740221 | JF740291 | ||||
| CBS 640.93 | PD 78/139 | Netherlands | JF740237 | JF740304 | ||||
| CBS 390.80 | PD 77/711 | Switzerland | JF740224 | JF740294 | ||||
| CBS 223.77 | Switzerland | JF740243 | JF740312 | |||||
| CBS 144.84 | CECT 20025; PD 82/1061 | Canada | JF740192 | JF740269 | ||||
| CBS 389.80 | PD 79/171 | Netherlands | JF740247 | JF740315 | ||||
| CBS 385.80 | PD 74/477 | UK | JF740244 | JF740313 | ||||
| CBS 145.84 | CECT 20059; PD 78/273 | Netherlands | JF740254 | JF740320 | ||||
| CBS 643.86 | Switzerland | JF740213 | GU301828 | |||||
| CBS 114198 | UPSC 2686 | Norway | JF740238 | JF740305 | ||||
| CBS 306.51 | Switzerland | JF740239 | JF740308 | |||||
| CBS 101638 | PD 97/12070 | USA | JF740230 | JF740299 | ||||
| CBS 114591 | Sweden | JF740241 | JF740310 | |||||
| CBS 615.75 | Netherlands | FJ427022 | EU754186 | |||||
| CBS 121.89 | PD 82/903 | Netherlands | JF740194 | JF740271 | ||||
| CBS 119951 | Netherlands | JF740198 | JF740274 | |||||
| CBS 539.63 | Greece | JF740253 | GU238151 | |||||
| CBS 120227 | JCM 13073; MAFF 239583 | Japan | JF740200 | JF740276 | ||||
| CBS 375.64 | Spain | AF439459 | JF740277 | |||||
| CBS 244.64 | Spain | AF439460 | JF740278 | |||||
| CBS 142.84 | CECT 20063; PD 81/654 | Netherlands | JF740214 | JF740287 | ||||
| CBS 414.62 | ETH 2961 | France | JF740222 | JF740292 | ||||
| CBS 139.78 | Netherlands | JF740226 | JF740296 | |||||
| CBS 143.84 | CECT 20064; PD 78/883 | Netherlands | JF740228 | JF740297 | ||||
| CBS 113795 | UPSC 2219 | Sweden | JF740231 | JF740300 | ||||
| CBS 381.67 | Canada | JF740233 | JF740302 | |||||
| CBS 260.94 | PD 78/989 | Netherlands | JF740235 | JF740307 | ||||
| CBS 248.92 | PD 79/141 | Peru | JF740236 | JF740303 | ||||
| CBS 101637 | PD 92/41 | Israel | JF740240 | JF740309 | ||||
| CBS 551.93 | PD 81/782 | Israel | JF740249 | JF740317 | ||||
| CBS 122783 | PD 74/1021 | France | JF740256 | EU754195 | ||||
| CBS 120119 | FAU 559 | Taiwan | JF740257 | JF740323 | ||||
| CBS 257.68 | IMI 331911 | Wheat field soil | Germany | JF740260 | EU754199 | |||
| CBS 407.76 | Italy | EU930011 | EU754206 | |||||
| CBS 101635 | PD 71/1027 | Europe | JF740262 | GQ387627 | ||||
| CBS 445.81 | PD 80/1254 | New Zealand | JF740263 | GU23816 | ||||
| CBS 285.72 | Germany | JF740196 | GU238040 | |||||
| CBS 269.92 | PD 88/896 | Netherlands | JF740211 | JF740285 | ||||
| CBS 630.68 | PD 68/141 | Netherlands | JF740251 | GU238150 | ||||
| CBS 306.68 | Netherlands | FJ427054 | GU238156 | |||||
1 ATCC: American Type Culture Collection, Virginia, USA; CBS: Culture collection of the Centraalbureau voor Schimmelcultures, Fungal Biodiversity Centre, Utrecht, The Netherlands; CECT: Colección Española de Cultivos Tipo, Valencia University, Spain; COAD: Culture collection of the Universidade Federal de Viçosa, Brasil; DAOM: Canadian Collection of Fungal Cultures, Ottawa, Canada; EGS: Personal collection of Dr. E.G. Simmons; ETH: Swiss Federal Institute of Technology, Switzerland; FAU: Personal collection of Francis A. Uecker; IFO: Institute for Fermentation Culture Collection, Osaka, Japan; IMI: Culture collection of CABI Europe UK Centre, Egham, UK; JCM: Japan Collection of Microorganisms, Riken Biosource Center, Japan; MAFF: MAFF GenBank Project, Ministry of Agriculture, Forestry and Fisheries, Tsukuba, Japan; PD: Plant Protection Service, Wageningen, The Netherlands; UPSC: Uppsala University Culture Collection, Sweden; VIC: herbarium of the Universidade Federal de Viçosa, Brasil.
Pathogenicity results of Alternariaster bidentis (CBS 134021) and Al. helianthi (CBS 134018) on 18 plants belonging to the Asteraceae.
| Subfamily | Tribe | Species | ||
|---|---|---|---|---|
| − | n | |||
| − | n | |||
| − | − | |||
| − | n | |||
| − | − | |||
| − | − | |||
| n | n | |||
| − | − | |||
| − | − | |||
| − | − | |||
| − | − | |||
| + | − | |||
| − | − | |||
| − | − | |||
| − | + | |||
| − | + | |||
| − | − | |||
| − | − |
1 − = no symptoms; + = leaf spot symptoms; n = necrosis.
Fig. 1Bayesian 50 % majority rule consensus tree based on the ITS and LSU sequences of 61 strains. The Bayesian posterior probabilities (PP) of 0.95 and above are given at the nodes. Thickened lines indicate a PP of 1.0. The tree was rooted using Phoma herbarum (CBS 615.75).
Fig. 2Alternariaster bidentis. a. Flowering healthy plants of Bidens sulphurea; b. leaves with leaf spot and necrosis; c. extensive blight; d–h. conidia attached to conidiogenous cells; i. spermogonium on SNA. — Scale bars = 10 μm, except i = 100 μm.
Fig. 3Alternariaster helianthi. a. Helianthus annuus with leaf spot and necrosis; b–e. conidia; f–h. conidia attached to conidiogenous cells. — Scale bars = 10 μm.
Fig. 4a, b. Alternariaster bidentis sp. nov. (CBS 134021) on Bidens sulphurea: a. Pathogenicity test evaluated at 14 d after inoculation (control left, inoculated right); b. detail of necrosis. — c. Alternariaster helianthi (CBS 134018) on Bidens sulphurea, no observed injury (control left, inoculated right). — d, e. Alternariaster helianthi (CBS 134018) on H. annuus: d. Pathogenicity test evaluated at 4 d after inoculation (control left, inoculated right); e. detail of necrosis. — f. Alternariaster bidentis sp. nov. (CBS 134021) on H. annuus, no observed injury (control left, inoculated right).