Literature DB >> 24757054

Current perspectives and the future of domestication studies.

Greger Larson1, Dolores R Piperno, Robin G Allaby, Michael D Purugganan, Leif Andersson, Manuel Arroyo-Kalin, Loukas Barton, Cynthia Climer Vigueira, Tim Denham, Keith Dobney, Andrew N Doust, Paul Gepts, M Thomas P Gilbert, Kristen J Gremillion, Leilani Lucas, Lewis Lukens, Fiona B Marshall, Kenneth M Olsen, J Chris Pires, Peter J Richerson, Rafael Rubio de Casas, Oris I Sanjur, Mark G Thomas, Dorian Q Fuller.   

Abstract

It is difficult to overstate the cultural and biological impacts that the domestication of plants and animals has had on our species. Fundamental questions regarding where, when, and how many times domestication took place have been of primary interest within a wide range of academic disciplines. Within the last two decades, the advent of new archaeological and genetic techniques has revolutionized our understanding of the pattern and process of domestication and agricultural origins that led to our modern way of life. In the spring of 2011, 25 scholars with a central interest in domestication representing the fields of genetics, archaeobotany, zooarchaeology, geoarchaeology, and archaeology met at the National Evolutionary Synthesis Center to discuss recent domestication research progress and identify challenges for the future. In this introduction to the resulting Special Feature, we present the state of the art in the field by discussing what is known about the spatial and temporal patterns of domestication, and controversies surrounding the speed, intentionality, and evolutionary aspects of the domestication process. We then highlight three key challenges for future research. We conclude by arguing that although recent progress has been impressive, the next decade will yield even more substantial insights not only into how domestication took place, but also when and where it did, and where and why it did not.

Keywords:  agriculture; evolution; human ecology; human history; selection

Mesh:

Year:  2014        PMID: 24757054      PMCID: PMC4035915          DOI: 10.1073/pnas.1323964111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  57 in total

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Authors:  N Upadyayula; H S da Silva; M O Bohn; T R Rocheford
Journal:  Theor Appl Genet       Date:  2006-01-05       Impact factor: 5.699

2.  Late Pleistocene demography and the appearance of modern human behavior.

Authors:  Adam Powell; Stephen Shennan; Mark G Thomas
Journal:  Science       Date:  2009-06-05       Impact factor: 47.728

3.  Beyond the single gene: How epistasis and gene-by-environment effects influence crop domestication.

Authors:  Andrew N Doust; Lewis Lukens; Kenneth M Olsen; Margarita Mauro-Herrera; Ann Meyer; Kimberly Rogers
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-21       Impact factor: 11.205

4.  Particularism and the retreat from theory in the archaeology of agricultural origins.

Authors:  Kristen J Gremillion; Loukas Barton; Dolores R Piperno
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-21       Impact factor: 11.205

5.  Architecture of floral branch systems in maize and related grasses.

Authors:  Erik Vollbrecht; Patricia S Springer; Lindee Goh; Edward S Buckler; Robert Martienssen
Journal:  Nature       Date:  2005-07-24       Impact factor: 49.962

6.  Archaeological data reveal slow rates of evolution during plant domestication.

Authors:  Michael D Purugganan; Dorian Q Fuller
Journal:  Evolution       Date:  2011-01       Impact factor: 3.694

7.  Comparative sequencing in the genus Lycopersicon. Implications for the evolution of fruit size in the domestication of cultivated tomatoes.

Authors:  T Clint Nesbitt; Steven D Tanksley
Journal:  Genetics       Date:  2002-09       Impact factor: 4.562

Review 8.  A bountiful harvest: genomic insights into crop domestication phenotypes.

Authors:  Kenneth M Olsen; Jonathan F Wendel
Journal:  Annu Rev Plant Biol       Date:  2013-02-28       Impact factor: 26.379

9.  Used planet: a global history.

Authors:  Erle C Ellis; Jed O Kaplan; Dorian Q Fuller; Steve Vavrus; Kees Klein Goldewijk; Peter H Verburg
Journal:  Proc Natl Acad Sci U S A       Date:  2013-04-29       Impact factor: 11.205

10.  Preceramic adoption of peanut, squash, and cotton in northern Peru.

Authors:  Tom D Dillehay; Jack Rossen; Thomas C Andres; David E Williams
Journal:  Science       Date:  2007-06-29       Impact factor: 47.728

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  129 in total

1.  Spatial Mapping and Profiling of Metabolite Distributions during Germination.

Authors:  Adam D Feenstra; Liza E Alexander; Zhihong Song; Andrew R Korte; Marna D Yandeau-Nelson; Basil J Nikolau; Young Jin Lee
Journal:  Plant Physiol       Date:  2017-06-20       Impact factor: 8.340

2.  Resequencing 302 wild and cultivated accessions identifies genes related to domestication and improvement in soybean.

Authors:  Zhengkui Zhou; Yu Jiang; Zheng Wang; Zhiheng Gou; Jun Lyu; Weiyu Li; Yanjun Yu; Liping Shu; Yingjun Zhao; Yanming Ma; Chao Fang; Yanting Shen; Tengfei Liu; Congcong Li; Qing Li; Mian Wu; Min Wang; Yunshuai Wu; Yang Dong; Wenting Wan; Xiao Wang; Zhaoli Ding; Yuedong Gao; Hui Xiang; Baoge Zhu; Suk-Ha Lee; Wen Wang; Zhixi Tian
Journal:  Nat Biotechnol       Date:  2015-02-02       Impact factor: 54.908

3.  Patterns of nuclear and chloroplast genetic diversity and structure of manioc along major Brazilian Amazonian rivers.

Authors:  Alessandro Alves-Pereira; Charles R Clement; Doriane Picanço-Rodrigues; Elizabeth A Veasey; Gabriel Dequigiovanni; Santiago L F Ramos; José B Pinheiro; Maria I Zucchi
Journal:  Ann Bot       Date:  2018-03-14       Impact factor: 4.357

4.  Ecological consequences of human niche construction: Examining long-term anthropogenic shaping of global species distributions.

Authors:  Nicole L Boivin; Melinda A Zeder; Dorian Q Fuller; Alison Crowther; Greger Larson; Jon M Erlandson; Tim Denham; Michael D Petraglia
Journal:  Proc Natl Acad Sci U S A       Date:  2016-06-07       Impact factor: 11.205

5.  Genomic signatures reveal new evidences for selection of important traits in domestic cattle.

Authors:  Lingyang Xu; Derek M Bickhart; John B Cole; Steven G Schroeder; Jiuzhou Song; Curtis P Van Tassell; Tad S Sonstegard; George E Liu
Journal:  Mol Biol Evol       Date:  2014-11-26       Impact factor: 16.240

6.  Toward a theory of punctuated subsistence change.

Authors:  Isaac I T Ullah; Ian Kuijt; Jacob Freeman
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-20       Impact factor: 11.205

7.  Crop origins explain variation in global agricultural relevance.

Authors:  Rubén Milla; Colin P Osborne
Journal:  Nat Plants       Date:  2021-05-13       Impact factor: 15.793

8.  Signatures of adaptation in the weedy rice genome.

Authors:  Lin-Feng Li; Ya-Ling Li; Yulin Jia; Ana L Caicedo; Kenneth M Olsen
Journal:  Nat Genet       Date:  2017-04-03       Impact factor: 38.330

9.  Is domestication driven by reduced fear of humans? Boldness, metabolism and serotonin levels in divergently selected red junglefowl (Gallus gallus).

Authors:  Beatrix Agnvall; Rebecca Katajamaa; Jordi Altimiras; Per Jensen
Journal:  Biol Lett       Date:  2015-09       Impact factor: 3.703

10.  The methylation landscape and its role in domestication and gene regulation in the chicken.

Authors:  Andrey Höglund; Rie Henriksen; Jesper Fogelholm; Allison M Churcher; Carlos M Guerrero-Bosagna; Alvaro Martinez-Barrio; Martin Johnsson; Per Jensen; Dominic Wright
Journal:  Nat Ecol Evol       Date:  2020-09-21       Impact factor: 15.460

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