Literature DB >> 24744192

Genetics in PBC: what do the "risk genes" teach us?

Gideon M Hirschfield1, Katherine A Siminovitch.   

Abstract

Primary biliary cirrhosis is characterised by a progressive and destructive lymphocytic cholangitis, targeting small intra-hepatic bile ducts. In association with the histologic liver injury, patients characteristically express highly specific auto-antibodies that recognise a conserved epitope of the pyruvate dehydrogenase complex found on the inner membrane of the mitochondria. Family studies demonstrate a clear increased incidence and prevalence of associated autoimmune diseases; and historically, a clear HLA association with disease has been evident. With the use of a high-throughput whole-genome array technology, significant insights into the non-HLA loci associated with risk for disease development have been made. These studies, which have primarily incorporated genome-wide association screens and targeted analysis of immune genes, have highlighted the integral roles for immune cell development and function in disease risk. This has revealed the IL-12/JAK-STAT signalling pathway as a key etiologic factor. In conjunction with a better understanding of environmental triggers, such work lays the foundation for better disease insights mechanistically and, hopefully, therapeutically. Obstacles to uncovering all the associated genetic risk and the correlation between genotype and phenotype remain to be circumvented, as do better appreciation of the processes that underpin not only disease initiation but also presentation and outcome.

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Year:  2015        PMID: 24744192     DOI: 10.1007/s12016-014-8419-x

Source DB:  PubMed          Journal:  Clin Rev Allergy Immunol        ISSN: 1080-0549            Impact factor:   8.667


  27 in total

1.  Immunochip analyses identify a novel risk locus for primary biliary cirrhosis at 13q14, multiple independent associations at four established risk loci and epistasis between 1p31 and 7q32 risk variants.

Authors:  Brian D Juran; Gideon M Hirschfield; Pietro Invernizzi; Elizabeth J Atkinson; Yafang Li; Gang Xie; Roman Kosoy; Michael Ransom; Ye Sun; Ilaria Bianchi; Erik M Schlicht; Ana Lleo; Catalina Coltescu; Francesca Bernuzzi; Mauro Podda; Craig Lammert; Russell Shigeta; Landon L Chan; Tobias Balschun; Maurizio Marconi; Daniele Cusi; E Jenny Heathcote; Andrew L Mason; Robert P Myers; Piotr Milkiewicz; Joseph A Odin; Velimir A Luketic; Bruce R Bacon; Henry C Bodenheimer; Valentina Liakina; Catherine Vincent; Cynthia Levy; Andre Franke; Peter K Gregersen; Fabrizio Bossa; M Eric Gershwin; Mariza deAndrade; Christopher I Amos; Konstantinos N Lazaridis; Michael F Seldin; Katherine A Siminovitch
Journal:  Hum Mol Genet       Date:  2012-08-29       Impact factor: 6.150

2.  Genome-wide association study identifies TNFSF15 and POU2AF1 as susceptibility loci for primary biliary cirrhosis in the Japanese population.

Authors:  Minoru Nakamura; Nao Nishida; Minae Kawashima; Yoshihiro Aiba; Atsushi Tanaka; Michio Yasunami; Hitomi Nakamura; Atsumasai Komori; Makoto Nakamuta; Mikio Zeniya; Etsuko Hashimoto; Hiromasa Ohira; Kazuhide Yamamoto; Morikazu Onji; Shuichi Kaneko; Masao Honda; Satoshi Yamagiwa; Kazuhiko Nakao; Takafumi Ichida; Hajime Takikawa; Masataka Seike; Takeji Umemura; Yoshiyuki Ueno; Shotaro Sakisaka; Kentaro Kikuchi; Hirotoshi Ebinuma; Noriyo Yamashiki; Sumito Tamura; Yasuhiko Sugawara; Akira Mori; Shintaro Yagi; Ken Shirabe; Akinobu Taketomi; Kuniaki Arai; Kyoko Monoe; Tatsuki Ichikawa; Makiko Taniai; Yasuhiro Miyake; Teru Kumagi; Masanori Abe; Kaname Yoshizawa; Satoru Joshita; Shinji Shimoda; Koichi Honda; Hiroki Takahashi; Katsuji Hirano; Yasuaki Takeyama; Kenichi Harada; Kiyoshi Migita; Masahiro Ito; Hiroshi Yatsuhashi; Nobuyoshi Fukushima; Hajime Ota; Tatsuji Komatsu; Takeo Saoshiro; Jinya Ishida; Hirotsugu Kouno; Hirotaka Kouno; Michiyasu Yagura; Masakazu Kobayashi; Toyokichi Muro; Naohiko Masaki; Keiichi Hirata; Yukio Watanabe; Yoko Nakamura; Masaaki Shimada; Noboru Hirashima; Toshiki Komeda; Kazuhiro Sugi; Michiaki Koga; Keisuke Ario; Eiichi Takesaki; Yoshihiko Maehara; Shinji Uemoto; Norihiro Kokudo; Hirohito Tsubouchi; Masashi Mizokami; Yasuni Nakanuma; Katsushi Tokunaga; Hiromi Ishibashi
Journal:  Am J Hum Genet       Date:  2012-09-20       Impact factor: 11.025

3.  Association of primary biliary cirrhosis with variants in the CLEC16A, SOCS1, SPIB and SIAE immunomodulatory genes.

Authors:  G M Hirschfield; G Xie; E Lu; Y Sun; B D Juran; V Chellappa; C Coltescu; A L Mason; P Milkiewicz; R P Myers; J A Odin; V A Luketic; B Bacon; H Bodenheimer; V Liakina; C Vincent; C Levy; S Pillai; K N Lazaridis; C I Amos; K A Siminovitch
Journal:  Genes Immun       Date:  2012-01-19       Impact factor: 2.676

4.  Genome-wide meta-analyses identify three loci associated with primary biliary cirrhosis.

Authors:  Xiangdong Liu; Pietro Invernizzi; Yue Lu; Roman Kosoy; Yan Lu; Ilaria Bianchi; Mauro Podda; Chun Xu; Gang Xie; Fabio Macciardi; Carlo Selmi; Sara Lupoli; Russell Shigeta; Michael Ransom; Ana Lleo; Annette T Lee; Andrew L Mason; Robert P Myers; Kevork M Peltekian; Cameron N Ghent; Francesca Bernuzzi; Massimo Zuin; Floriano Rosina; Elisabetta Borghesio; Annarosa Floreani; Roberta Lazzari; Grazia Niro; Angelo Andriulli; Luigi Muratori; Paolo Muratori; Piero L Almasio; Pietro Andreone; Marzia Margotti; Maurizia Brunetto; Barbara Coco; Domenico Alvaro; Maria C Bragazzi; Fabio Marra; Alessandro Pisano; Cristina Rigamonti; Massimo Colombo; Marco Marzioni; Antonio Benedetti; Luca Fabris; Mario Strazzabosco; Piero Portincasa; Vincenzo O Palmieri; Claudio Tiribelli; Lory Croce; Savino Bruno; Sonia Rossi; Maria Vinci; Cleofe Prisco; Alberto Mattalia; Pierluigi Toniutto; Antonio Picciotto; Andrea Galli; Carlo Ferrari; Silvia Colombo; Giovanni Casella; Lorenzo Morini; Nicola Caporaso; Agostino Colli; Giancarlo Spinzi; Renzo Montanari; Peter K Gregersen; E Jenny Heathcote; Gideon M Hirschfield; Katherine A Siminovitch; Christopher I Amos; M Eric Gershwin; Michael F Seldin
Journal:  Nat Genet       Date:  2010-07-18       Impact factor: 38.330

5.  Long-range gene regulation links genomic type 2 diabetes and obesity risk regions to HHEX, SOX4, and IRX3.

Authors:  Anja Ragvin; Enrico Moro; David Fredman; Pavla Navratilova; Øyvind Drivenes; Pär G Engström; M Eva Alonso; Elisa de la Calle Mustienes; José Luis Gómez Skarmeta; Maria J Tavares; Fernando Casares; Miguel Manzanares; Veronica van Heyningen; Anders Molven; Pål R Njølstad; Francesco Argenton; Boris Lenhard; Thomas S Becker
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-22       Impact factor: 11.205

6.  Primary biliary cirrhosis associated with HLA, IL12A, and IL12RB2 variants.

Authors:  Gideon M Hirschfield; Xiangdong Liu; Chun Xu; Yue Lu; Gang Xie; Yan Lu; Xiangjun Gu; Erin J Walker; Kaiyan Jing; Brian D Juran; Andrew L Mason; Robert P Myers; Kevork M Peltekian; Cameron N Ghent; Catalina Coltescu; Elizabeth J Atkinson; E Jenny Heathcote; Konstantinos N Lazaridis; Christopher I Amos; Katherine A Siminovitch
Journal:  N Engl J Med       Date:  2009-05-20       Impact factor: 91.245

Review 7.  Primary sclerosing cholangitis.

Authors:  Gideon M Hirschfield; Tom H Karlsen; Keith D Lindor; David H Adams
Journal:  Lancet       Date:  2013-06-28       Impact factor: 79.321

Review 8.  Novel insights into autoimmune liver diseases provided by genome-wide association studies.

Authors:  George F Mells; Arthur Kaser; Tom H Karlsen
Journal:  J Autoimmun       Date:  2013-08-07       Impact factor: 7.094

9.  CTLA4/ICOS gene variants and haplotypes are associated with rheumatoid arthritis and primary biliary cirrhosis in the Canadian population.

Authors:  Erin J Walker; Gideon M Hirschfield; Chun Xu; Yan Lu; Xiangdong Liu; Yue Lu; Catalina Coltescu; Kesheng Wang; William G Newman; Vivian Bykerk; Edward C Keystone; Dianne Mosher; Christopher I Amos; E Jenny Heathcote; Katherine A Siminovitch
Journal:  Arthritis Rheum       Date:  2009-04

10.  Genetics of rheumatoid arthritis contributes to biology and drug discovery.

Authors:  Yukinori Okada; Di Wu; Gosia Trynka; Towfique Raj; Chikashi Terao; Katsunori Ikari; Yuta Kochi; Koichiro Ohmura; Akari Suzuki; Shinji Yoshida; Robert R Graham; Arun Manoharan; Ward Ortmann; Tushar Bhangale; Joshua C Denny; Robert J Carroll; Anne E Eyler; Jeffrey D Greenberg; Joel M Kremer; Dimitrios A Pappas; Lei Jiang; Jian Yin; Lingying Ye; Ding-Feng Su; Jian Yang; Gang Xie; Ed Keystone; Harm-Jan Westra; Tõnu Esko; Andres Metspalu; Xuezhong Zhou; Namrata Gupta; Daniel Mirel; Eli A Stahl; Dorothée Diogo; Jing Cui; Katherine Liao; Michael H Guo; Keiko Myouzen; Takahisa Kawaguchi; Marieke J H Coenen; Piet L C M van Riel; Mart A F J van de Laar; Henk-Jan Guchelaar; Tom W J Huizinga; Philippe Dieudé; Xavier Mariette; S Louis Bridges; Alexandra Zhernakova; Rene E M Toes; Paul P Tak; Corinne Miceli-Richard; So-Young Bang; Hye-Soon Lee; Javier Martin; Miguel A Gonzalez-Gay; Luis Rodriguez-Rodriguez; Solbritt Rantapää-Dahlqvist; Lisbeth Arlestig; Hyon K Choi; Yoichiro Kamatani; Pilar Galan; Mark Lathrop; Steve Eyre; John Bowes; Anne Barton; Niek de Vries; Larry W Moreland; Lindsey A Criswell; Elizabeth W Karlson; Atsuo Taniguchi; Ryo Yamada; Michiaki Kubo; Jun S Liu; Sang-Cheol Bae; Jane Worthington; Leonid Padyukov; Lars Klareskog; Peter K Gregersen; Soumya Raychaudhuri; Barbara E Stranger; Philip L De Jager; Lude Franke; Peter M Visscher; Matthew A Brown; Hisashi Yamanaka; Tsuneyo Mimori; Atsushi Takahashi; Huji Xu; Timothy W Behrens; Katherine A Siminovitch; Shigeki Momohara; Fumihiko Matsuda; Kazuhiko Yamamoto; Robert M Plenge
Journal:  Nature       Date:  2013-12-25       Impact factor: 49.962

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  13 in total

1.  Unmet challenges in immune-mediated hepatobiliary diseases.

Authors:  Ulrich Beuers; M Eric Gershwin
Journal:  Clin Rev Allergy Immunol       Date:  2015-06       Impact factor: 8.667

Review 2.  Geoepidemiology and changing mortality in primary biliary cholangitis.

Authors:  Annarosa Floreani; Atsushi Tanaka; Christopher Bowlus; Merrill Eric Gershwin
Journal:  J Gastroenterol       Date:  2017-04-01       Impact factor: 7.527

3.  Loss of the zona pellucida-binding protein 2 (Zpbp2) gene in mice impacts airway hypersensitivity and lung lipid metabolism in a sex-dependent fashion.

Authors:  Cynthia Kanagaratham; Victoria Chiwara; Bianca Ho; Sanny Moussette; Mina Youssef; David Venuto; Lucie Jeannotte; Guillaume Bourque; Juan Bautista de Sanctis; Danuta Radzioch; Anna K Naumova
Journal:  Mamm Genome       Date:  2018-03-13       Impact factor: 2.957

Review 4.  Mold and Human Health: a Reality Check.

Authors:  Andrea T Borchers; Christopher Chang; M Eric Gershwin
Journal:  Clin Rev Allergy Immunol       Date:  2017-06       Impact factor: 8.667

5.  Trichloroethylene Exposure Reduces Liver Injury in a Mouse Model of Primary Biliary Cholangitis.

Authors:  Jessica L Ray; Anna K Kopec; Nikita Joshi; Holly Cline-Fedewa; Lawrence H Lash; Kurt J Williams; Patrick S Leung; M Eric Gershwin; James P Luyendyk
Journal:  Toxicol Sci       Date:  2017-04-01       Impact factor: 4.849

6.  Time to make the change from 'primary biliary cirrhosis' to 'primary biliary cholangitis'.

Authors:  Angela C Cheung; Aldo Montano-Loza; Mark Swain; Catherine Vincent; Eberhard Renner; Morris Sherman; Harry L A Janssen; Andrew L Mason
Journal:  Can J Gastroenterol Hepatol       Date:  2015-07-21

Review 7.  A contemporary perspective on the molecular characteristics of mitochondrial autoantigens and diagnosis in primary biliary cholangitis.

Authors:  Patrick S C Leung; Jinjung Choi; Guoxiang Yang; Elena Woo; Thomas P Kenny; M Eric Gershwin
Journal:  Expert Rev Mol Diagn       Date:  2016-03-30       Impact factor: 5.225

Review 8.  Proposed therapies in primary biliary cholangitis.

Authors:  Annarosa Floreani; Ying Sun; Zheng Sheng Zou; Baosen Li; Nora Cazzagon; Christopher L Bowlus; M Eric Gershwin
Journal:  Expert Rev Gastroenterol Hepatol       Date:  2016-01-06       Impact factor: 3.869

9.  The Natural History and Prognosis of Primary Biliary Cirrhosis with Clinical Features of Autoimmune Hepatitis.

Authors:  Fan Yang; Qixia Wang; Zhaoyue Wang; Qi Miao; Xiao Xiao; Ruqi Tang; Xiaoyu Chen; Zhaolian Bian; Haiyan Zhang; Yue Yang; Li Sheng; Jingyuan Fang; Dekai Qiu; Edward L Krawitt; M Eric Gershwin; Xiong Ma
Journal:  Clin Rev Allergy Immunol       Date:  2016-02       Impact factor: 8.667

10.  Deletion of Galectin-3 Enhances Xenobiotic Induced Murine Primary Biliary Cholangitis by Facilitating Apoptosis of BECs and Release of Autoantigens.

Authors:  Aleksandar Arsenijevic; Marija Milovanovic; Jelena Milovanovic; Bojana Stojanovic; Natasa Zdravkovic; Patrick S C Leung; Fu-Tong Liu; M Eric Gershwin; Miodrag L Lukic
Journal:  Sci Rep       Date:  2016-03-21       Impact factor: 4.379

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