Literature DB >> 26603943

Quantifying Modes of 3D Cell Migration.

Meghan K Driscoll1, Gaudenz Danuser2.   

Abstract

Although it is widely appreciated that cells migrate in a variety of diverse environments in vivo, we are only now beginning to use experimental workflows that yield images with sufficient spatiotemporal resolution to study the molecular processes governing cell migration in 3D environments. Since cell migration is a dynamic process, it is usually studied via microscopy, but 3D movies of 3D processes are difficult to interpret by visual inspection. In this review, we discuss the technologies required to study the diversity of 3D cell migration modes with a focus on the visualization and computational analysis tools needed to study cell migration quantitatively at a level comparable to the analyses performed today on cells crawling on flat substrates.
Copyright © 2015 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  3D cell migration; image analysis; image visualization

Mesh:

Year:  2015        PMID: 26603943      PMCID: PMC4663125          DOI: 10.1016/j.tcb.2015.09.010

Source DB:  PubMed          Journal:  Trends Cell Biol        ISSN: 0962-8924            Impact factor:   20.808


  77 in total

1.  Extensible visualization and analysis for multidimensional images using Vaa3D.

Authors:  Hanchuan Peng; Alessandro Bria; Zhi Zhou; Giulio Iannello; Fuhui Long
Journal:  Nat Protoc       Date:  2014-01-02       Impact factor: 13.491

2.  Three-dimensional cell migration does not follow a random walk.

Authors:  Pei-Hsun Wu; Anjil Giri; Sean X Sun; Denis Wirtz
Journal:  Proc Natl Acad Sci U S A       Date:  2014-03-04       Impact factor: 11.205

Review 3.  Advances in whole-embryo imaging: a quantitative transition is underway.

Authors:  Periklis Pantazis; Willy Supatto
Journal:  Nat Rev Mol Cell Biol       Date:  2014-04-16       Impact factor: 94.444

Review 4.  Mathematical modeling of eukaryotic cell migration: insights beyond experiments.

Authors:  Gaudenz Danuser; Jun Allard; Alex Mogilner
Journal:  Annu Rev Cell Dev Biol       Date:  2013-07-24       Impact factor: 13.827

5.  Water permeation drives tumor cell migration in confined microenvironments.

Authors:  Kimberly M Stroka; Hongyuan Jiang; Shih-Hsun Chen; Ziqiu Tong; Denis Wirtz; Sean X Sun; Konstantinos Konstantopoulos
Journal:  Cell       Date:  2014-04-10       Impact factor: 41.582

Review 6.  Envisioning migration: mathematics in both experimental analysis and modeling of cell behavior.

Authors:  Elizabeth R Zhang; Lani F Wu; Steven J Altschuler
Journal:  Curr Opin Cell Biol       Date:  2013-05-06       Impact factor: 8.382

7.  Quantifying cell-generated mechanical forces within living embryonic tissues.

Authors:  Otger Campàs; Tadanori Mammoto; Sean Hasso; Ralph A Sperling; Daniel O'Connell; Ashley G Bischof; Richard Maas; David A Weitz; L Mahadevan; Donald E Ingber
Journal:  Nat Methods       Date:  2013-12-08       Impact factor: 28.547

8.  3D time series analysis of cell shape using Laplacian approaches.

Authors:  Cheng-Jin Du; Phillip T Hawkins; Len R Stephens; Till Bretschneider
Journal:  BMC Bioinformatics       Date:  2013-10-04       Impact factor: 3.169

Review 9.  The role and regulation of blebs in cell migration.

Authors:  Ewa K Paluch; Erez Raz
Journal:  Curr Opin Cell Biol       Date:  2013-06-17       Impact factor: 8.382

10.  Mechanisms of leading edge protrusion in interstitial migration.

Authors:  Kerry Wilson; Alexandre Lewalle; Marco Fritzsche; Richard Thorogate; Tom Duke; Guillaume Charras
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

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  18 in total

1.  Bleb Expansion in Migrating Cells Depends on Supply of Membrane from Cell Surface Invaginations.

Authors:  Mohammad Goudarzi; Katsiaryna Tarbashevich; Karina Mildner; Isabell Begemann; Jamie Garcia; Azadeh Paksa; Michal Reichman-Fried; Harsha Mahabaleshwar; Heiko Blaser; Johannes Hartwig; Dagmar Zeuschner; Milos Galic; Michel Bagnat; Timo Betz; Erez Raz
Journal:  Dev Cell       Date:  2017-11-22       Impact factor: 12.270

2.  Quantitative Multiscale Cell Imaging in Controlled 3D Microenvironments.

Authors:  Erik S Welf; Meghan K Driscoll; Kevin M Dean; Claudia Schäfer; Jun Chu; Michael W Davidson; Michael Z Lin; Gaudenz Danuser; Reto Fiolka
Journal:  Dev Cell       Date:  2016-02-22       Impact factor: 12.270

3.  Cell Tracking Profiler - a user-driven analysis framework for evaluating 4D live-cell imaging data.

Authors:  Claire Mitchell; Lauryanne Caroff; Jose Alonso Solis-Lemus; Constantino Carlos Reyes-Aldasoro; Alessandra Vigilante; Fiona Warburton; Fabrice de Chaumont; Alexandre Dufour; Stephane Dallongeville; Jean-Christophe Olivo-Marin; Robert Knight
Journal:  J Cell Sci       Date:  2020-11-23       Impact factor: 5.285

Review 4.  Multicellular tumor invasion and plasticity in biomimetic materials.

Authors:  Susan E Leggett; Amanda S Khoo; Ian Y Wong
Journal:  Biomater Sci       Date:  2017-07-25       Impact factor: 6.843

5.  A minimal computational model for three-dimensional cell migration.

Authors:  Yuansheng Cao; Elisabeth Ghabache; Yuchuan Miao; Cassandra Niman; Hiroyuki Hakozaki; Samara L Reck-Peterson; Peter N Devreotes; Wouter-Jan Rappel
Journal:  J R Soc Interface       Date:  2019-12-18       Impact factor: 4.118

Review 6.  Multiple mechanisms of 3D migration: the origins of plasticity.

Authors:  Ryan J Petrie; Kenneth M Yamada
Journal:  Curr Opin Cell Biol       Date:  2016-04-12       Impact factor: 8.382

7.  Effect of Cytoskeleton Elasticity on Amoeboid Swimming.

Authors:  Madhav Ranganathan; Alexander Farutin; Chaouqi Misbah
Journal:  Biophys J       Date:  2018-08-16       Impact factor: 4.033

8.  Mechanophenotyping of 3D multicellular clusters using displacement arrays of rendered tractions.

Authors:  Susan E Leggett; Mohak Patel; Thomas M Valentin; Lena Gamboa; Amanda S Khoo; Evelyn Kendall Williams; Christian Franck; Ian Y Wong
Journal:  Proc Natl Acad Sci U S A       Date:  2020-03-02       Impact factor: 12.779

9.  Independent modes of ganglion cell translocation ensure correct lamination of the zebrafish retina.

Authors:  Jaroslav Icha; Christiane Kunath; Mauricio Rocha-Martins; Caren Norden
Journal:  J Cell Biol       Date:  2016-10-24       Impact factor: 10.539

10.  Revealing chiral cell motility by 3D Riesz transform-differential interference contrast microscopy and computational kinematic analysis.

Authors:  Atsushi Tamada; Michihiro Igarashi
Journal:  Nat Commun       Date:  2017-12-19       Impact factor: 14.919

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