| Literature DB >> 24732312 |
Jun Jin1, Wuying Li2, Lingmei Peng3, Jian Chen2, Rong Li2, Peihua Wu2, Sheng Tan2.
Abstract
OBJECTIVE: To analyze the association between -1082A/G polymorphism in interleukin-10 (IL-10) gene and ischemic stroke (IS) risk by meta-analysis.Entities:
Mesh:
Substances:
Year: 2014 PMID: 24732312 PMCID: PMC3986397 DOI: 10.1371/journal.pone.0094631
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1Flow diagram of the study selection process.
Characteristics of studies included in the meta-analysis.
| Study | Ethnicity | Study design | Control source | Genotype distribution(case/control) | HWE | NOS | ||
| AA | AG | GG | ( | |||||
| Marousi2011 | Greece | Case-control | Hospital based | 47/53 | 71/71 | 27/21 | 0.72 | 6 |
| Munshi2010 | Indian | Case-control | Population based | 92/63 | 241/218 | 147/189 | 0.99 | 6 |
| Tuttolomondo2012 | Caucasian | Case-control | Hospital based | 58/20 | 14/17 | 24/11 | 0.07 | 6 |
| Jin 2011 | Chinese | Case-control | Hospital based | 161/78 | 27/12 | 1/2 | 0.09 | 7 |
| Zhang2007 | Chinses | Case-control | Hospital based | 202/120 | 2/11 | 0/0 | 0.61 | 6 |
| Lin 2009 | Chinese | Case-control | Hospital based | 153/83 | 28/32 | 0/0 | 0.08 | 6 |
| Sultana 2011 | Indian | Case-control | Population based | 154/163 | 44/47 | 40/16 | 0.000 | 7 |
Summary risk estimates for association between IL-10-1082A/G polymorphism and IS.
| Comparisons | Stratifications | Studies(n) | M | Pooled estimate | Heterogeneity | ||
| OR(95%CI) |
| I2 (%) |
| ||||
| A vs. G | Overall | 7 | R | 1.23(0.85, 1.79) | 0.35 | 83 | <0.0001 |
| Asians | 5 | R | 1.37(0.80, 2.34) | 0.26 | 87 | <0.0001 | |
| Non-Asians | 2 | R | 1.06(0.63, 1.78) | 0.82 | 66 | 0.09 | |
| Hospital-based | 5 | R | 1.47(0.90, 2.40) | 0.13 | 73 | 0.006 | |
| Population-based | 2 | R | 0.92(0.41, 2.07) | 0.84 | 95 | <0.0001 | |
| AA vs. GG | Overall | 5 | R | 1.01(0.47, 2.19) | 0.97 | 82 | 0.0002 |
| Asians | 3 | R | 1.15(0.29, 5.54) | 0.84 | 90 | <0.0001 | |
| Non-Asians | 2 | F | 0.88(0.51, 1.52) | 0.66 | 25 | 0.25 | |
| Hospital -based | 3 | F | 0.96(0.57, 1.62) | 0.87 | 29 | 0.25 | |
| Population-based | 2 | R | 0.86(0.18, 4.14) | 0.94 | 95 | <0.0001 | |
| AG vs. GG | Overall | 5 | R | 0.76 (0.38, 1.55) | 0.45 | 78 | 0.001 |
| Asians | 3 | R | 0.99 (0.31, 3.19) | 0.99 | 84 | 0.002 | |
| Non-Asians | 2 | F | 0.63 (0.36, 1.08) | 0.09 | 28 | 0.24 | |
| Hospital -based | 3 | F | 0.69(0.41, 1.18) | 0.17 | 46 | 0.16 | |
| Population-based | 2 | R | 0.76(0.21, 2.80) | 0.69 | 91 | 0.0006 | |
| AA+AG vs.GG | Overall | 5 | R | 0.89(0.46, 1.73) | 0.73 | 80 | 0.0004 |
| Asians | 3 | R | 1.02(0.30, 3.46) | 0.97 | 89 | 0.0001 | |
| Non-Asians | 2 | F | 0.79(0.48, 1.30) | 0.36 | 0 | 0.72 | |
| Hospital -based | 3 | F | 0.85(0.53, 1.38) | 0.52 | 0 | 0.39 | |
| Population-based | 2 | R | 0.78(0.20, 3.06) | 0.72 | 80 | 0.0004 | |
| AA vs.AG+GG | Overall | 7 | R | 1.39(0.91, 2.13) | 0.13 | 75 | 0.0005 |
| Asians | 5 | R | 1.48(0.85, 2.57) | 0.17 | 79 | 0.0007 | |
| Non-Asians | 2 | R | 1.29(0.51, 3.23) | 0.59 | 79 | 0.03 | |
| Hospital -based | 5 | R | 1.68(0.93, 3.04) | 0.09 | 72 | 0.006 | |
| Population-based | 2 | R | 1.05(0.49, 2.23) | 0.90 | 88 | 0.004 | |
NA, data not available;
M, Statistical model.
R, random-effects model; F, fixed-effects model.
PZ, P value for Z test; PH, P value for heterogeneity.
Figure 2Forest plots for association between IL-10 −1082 A/G polymorphism and IS risk in different genetic models.
((A) Allele model(A vs. G); (B) Homozygote model (AA vs. GG); (C) Heterozygote model (AG vs. GG); (D) Dominant model (AA+AG vs. GG); (E) Recessive model (AA vs. AG+GG)).
Sensitivity analysis: Study deviated from HWE were excluded in Asians under all models and for overall studies in recessive model.
| Comparisons | Stratifications | Studies(n) | M | Pooled estimate | Heterogeneity | ||
| OR(95%CI) |
| I2 (%) |
| ||||
| A vs. G | Asians | 5 | R | 1.37(0.80, 2.34) | 0.26 | 87 | <0.0001 |
| SA-A | 4 | R | 1.64(1.07, 2.34) | 0.02 | 60 | 0.02 | |
| AA vs. GG | Asians | 5 | R | 1.15(0.29, 5.54) | 0.84 | 90 | <0.0001 |
| SA-A | 4 | F | 1.91(1.31, 2.80) | 0.0008 | 0 | 0.53 | |
| AG vs. GG | Asians | 5 | R | 0.99 (0.31, 3.19) | 0.99 | 84 | 0.002 |
| SA-A | 4 | F | 1.44 (1.09, 1.91) | 0.01 | 0 | 0.37 | |
| AA+AG vs.GG | Asians | 5 | R | 1.02 (0.30, 3.46) | 0.97 | 89 | 0.0001 |
| SA-A | 4 | F | 1.54(1.18, 2.01) | 0.001 | 0 | 0.42 | |
| AA vs.AG+GG | Overall | 7 | R | 1.39(0.91, 2.13) | 0.13 | 75 | 0.0005 |
| SA-O | 6 | R | 1.58(1.04, 2.42) | 0.03 | 66 | 0.01 | |
| Asians | 5 | R | 1.48(0.85, 2.57) | 0.17 | 79 | 0.0007 | |
| SA-A | 4 | R | 1.79(1.07, 3.00) | 0.03 | 60 | 0.03 | |
M, Statistical model.
R, random-effects model; F, fixed-effects model.
PZ, P value for Z test; PH, P value for heterogeneity.
SA-A: Sensitivity analysis (Study deviated from HWE were exclude).in Asians.
SA-O: Sensitivity analysis (Study deviated from HWE were exclude).in overall studies.
*:the association is sill significant after Bonferronic correction for multiple testing.
Figure 3Forest plots for association between IL-10 −1082 A/G polymorphism and IS risk based on ethnicity for studies in Hardy-Weinberg equilibrium.
((A) Allele model (A vs. G); (B) Homozygote model (AA vs. GG); (C) Heterozygote model (AG vs. GG); (D) Dominant model (AA+AG vs. GG); (E) Recessive model (AA vs. AG+GG)).
Publication bias tests for association between IL-10-1082A/G polymorphism and IS.
| Comparisons | Egger test | Begg test | |
|
| 95%CI |
| |
| A vs. G | 0.632 | (−4.045, 6.047) | 0.548 |
| AA vs. GG | 0.773 | (−9.428, 7.727) | 0.806 |
| AG vs. GG | 0.384 | (−7.216, 3.719) | 0.806 |
| AA+AG vs. GG | 0.503 | (−7.828, 4.812) | 0.806 |
| GG vs. AG+AA | 0.202 | (−2.163, 7.922) | 0.133 |
Figure 4Begg's funnel plots for IL-10 −1082 A/G polymorphism and IS risk.
((A) Allele model (A vs. G); (B) Homozygote model (AA vs. GG); (C) Heterozygote model(AG vs. GG); (D) Dominant model (AA+AG vs. GG); (E) Recessive model (AA vs. AG+GG)).