Literature DB >> 24729539

TBC1D24 mutation causes autosomal-dominant nonsyndromic hearing loss.

Hela Azaiez1, Kevin T Booth, Fengxiao Bu, Patrick Huygen, Seiji B Shibata, A Eliot Shearer, Diana Kolbe, Nicole Meyer, E Ann Black-Ziegelbein, Richard J H Smith.   

Abstract

Hereditary hearing loss is extremely heterogeneous. Over 70 genes have been identified to date, and with the advent of massively parallel sequencing, the pace of novel gene discovery has accelerated. In a family segregating progressive autosomal-dominant nonsyndromic hearing loss (NSHL), we used OtoSCOPE® to exclude mutations in known deafness genes and then performed segregation mapping and whole-exome sequencing to identify a unique variant, p.Ser178Leu, in TBC1D24 that segregates with the hearing loss phenotype. TBC1D24 encodes a GTPase-activating protein expressed in the cochlea. Ser178 is highly conserved across vertebrates and its change is predicted to be damaging. Other variants in TBC1D24 have been associated with a panoply of clinical symptoms including autosomal recessive NSHL, syndromic hearing impairment associated with onychodystrophy, osteodystrophy, mental retardation, and seizures (DOORS syndrome), and a wide range of epileptic disorders.
© 2014 WILEY PERIODICALS, INC.

Entities:  

Keywords:  OtoSCOPE®; TBC1D24; autosomal dominant; hearing impairment; hearing loss; nonsyndromic; pleiotropy

Mesh:

Substances:

Year:  2014        PMID: 24729539      PMCID: PMC4267685          DOI: 10.1002/humu.22557

Source DB:  PubMed          Journal:  Hum Mutat        ISSN: 1059-7794            Impact factor:   4.878


  21 in total

1.  Comprehensive genetic testing for hereditary hearing loss using massively parallel sequencing.

Authors:  A Eliot Shearer; Adam P DeLuca; Michael S Hildebrand; Kyle R Taylor; José Gurrola; Steve Scherer; Todd E Scheetz; Richard J H Smith
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-15       Impact factor: 11.205

2.  TBC1D24, an ARF6-interacting protein, is mutated in familial infantile myoclonic epilepsy.

Authors:  Antonio Falace; Fabia Filipello; Veronica La Padula; Nicola Vanni; Francesca Madia; Davide De Pietri Tonelli; Fabrizio A de Falco; Pasquale Striano; Franca Dagna Bricarelli; Carlo Minetti; Fabio Benfenati; Anna Fassio; Federico Zara
Journal:  Am J Hum Genet       Date:  2010-08-19       Impact factor: 11.025

Review 3.  ARF proteins: roles in membrane traffic and beyond.

Authors:  Crislyn D'Souza-Schorey; Philippe Chavrier
Journal:  Nat Rev Mol Cell Biol       Date:  2006-05       Impact factor: 94.444

4.  Advancing genetic testing for deafness with genomic technology.

Authors:  A Eliot Shearer; E Ann Black-Ziegelbein; Michael S Hildebrand; Robert W Eppsteiner; Harini Ravi; Swati Joshi; Angelica C Guiffre; Christina M Sloan; Scott Happe; Susanna D Howard; Barbara Novak; Adam P Deluca; Kyle R Taylor; Todd E Scheetz; Terry A Braun; Thomas L Casavant; William J Kimberling; Emily M Leproust; Richard J H Smith
Journal:  J Med Genet       Date:  2013-06-26       Impact factor: 6.318

5.  Mutations in TBC1D24, a gene associated with epilepsy, also cause nonsyndromic deafness DFNB86.

Authors:  Atteeq U Rehman; Regie Lyn P Santos-Cortez; Robert J Morell; Meghan C Drummond; Taku Ito; Kwanghyuk Lee; Asma A Khan; Muhammad Asim R Basra; Naveed Wasif; Muhammad Ayub; Rana A Ali; Syed I Raza; Deborah A Nickerson; Jay Shendure; Michael Bamshad; Saima Riazuddin; Neil Billington; Shaheen N Khan; Penelope L Friedman; Andrew J Griffith; Wasim Ahmad; Sheikh Riazuddin; Suzanne M Leal; Thomas B Friedman
Journal:  Am J Hum Genet       Date:  2014-01-02       Impact factor: 11.025

6.  A focal epilepsy and intellectual disability syndrome is due to a mutation in TBC1D24.

Authors:  Mark A Corbett; Melanie Bahlo; Lachlan Jolly; Zaid Afawi; Alison E Gardner; Karen L Oliver; Stanley Tan; Amy Coffey; John C Mulley; Leanne M Dibbens; Walid Simri; Adel Shalata; Sara Kivity; Graeme D Jackson; Samuel F Berkovic; Jozef Gecz
Journal:  Am J Hum Genet       Date:  2010-09-10       Impact factor: 11.025

7.  The genetic basis of DOORS syndrome: an exome-sequencing study.

Authors:  Philippe M Campeau; Dalia Kasperaviciute; James T Lu; Lindsay C Burrage; Choel Kim; Mutsuki Hori; Berkley R Powell; Fiona Stewart; Têmis Maria Félix; Jenneke van den Ende; Marzena Wisniewska; Hülya Kayserili; Patrick Rump; Sheela Nampoothiri; Salim Aftimos; Antje Mey; Lal D V Nair; Michael L Begleiter; Isabelle De Bie; Girish Meenakshi; Mitzi L Murray; Gabriela M Repetto; Mahin Golabi; Edward Blair; Alison Male; Fabienne Giuliano; Ariana Kariminejad; William G Newman; Sanjeev S Bhaskar; Jonathan E Dickerson; Bronwyn Kerr; Siddharth Banka; Jacques C Giltay; Dagmar Wieczorek; Anna Tostevin; Joanna Wiszniewska; Sau Wai Cheung; Raoul C Hennekam; Richard A Gibbs; Brendan H Lee; Sanjay M Sisodiya
Journal:  Lancet Neurol       Date:  2013-11-29       Impact factor: 44.182

8.  Novel compound heterozygous mutations in the MYO15A gene in autosomal recessive hearing loss identified by whole-exome sequencing.

Authors:  Xue Gao; Qing-yan Zhu; Yue-Shuai Song; Guo-Jian Wang; Yong-Yi Yuan; Feng Xin; Sha-Sha Huang; Dong-Yang Kang; Ming-Yu Han; Li-ping Guan; Jian-guo Zhang; Pu Dai
Journal:  J Transl Med       Date:  2013-11-09       Impact factor: 5.531

9.  Edgetic perturbation models of human inherited disorders.

Authors:  Quan Zhong; Nicolas Simonis; Qian-Ru Li; Benoit Charloteaux; Fabien Heuze; Niels Klitgord; Stanley Tam; Haiyuan Yu; Kavitha Venkatesan; Danny Mou; Venus Swearingen; Muhammed A Yildirim; Han Yan; Amélie Dricot; David Szeto; Chenwei Lin; Tong Hao; Changyu Fan; Stuart Milstein; Denis Dupuy; Robert Brasseur; David E Hill; Michael E Cusick; Marc Vidal
Journal:  Mol Syst Biol       Date:  2009-11-03       Impact factor: 11.429

10.  SNP linkage analysis and whole exome sequencing identify a novel POU4F3 mutation in autosomal dominant late-onset nonsyndromic hearing loss (DFNA15).

Authors:  Hee-Jin Kim; Hong-Hee Won; Kyoung-Jin Park; Sung Hwa Hong; Chang-Seok Ki; Sang Sun Cho; Hanka Venselaar; Gert Vriend; Jong-Won Kim
Journal:  PLoS One       Date:  2013-11-18       Impact factor: 3.240

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  40 in total

1.  Curating Clinically Relevant Transcripts for the Interpretation of Sequence Variants.

Authors:  Marina T DiStefano; Sarah E Hemphill; Brandon J Cushman; Mark J Bowser; Elizabeth Hynes; Andrew R Grant; Rebecca K Siegert; Andrea M Oza; Michael A Gonzalez; Sami S Amr; Heidi L Rehm; Ahmad N Abou Tayoun
Journal:  J Mol Diagn       Date:  2018-08-08       Impact factor: 5.568

Review 2.  Whole-exome sequencing and its impact in hereditary hearing loss.

Authors:  Tahir Atik; Guney Bademci; Oscar Diaz-Horta; Susan H Blanton; Mustafa Tekin
Journal:  Genet Res (Camb)       Date:  2015-03-31       Impact factor: 1.588

3.  Targeted gene capture and massively parallel sequencing identify TMC1 as the causative gene in a six-generation Chinese family with autosomal dominant hearing loss.

Authors:  Xue Gao; Sha-Sha Huang; Yong-Yi Yuan; Guo-Jian Wang; Jin-Cao Xu; Yu-Bin Ji; Ming-Yu Han; Fei Yu; Dong-Yang Kang; Xi Lin; Pu Dai
Journal:  Am J Med Genet A       Date:  2015-06-16       Impact factor: 2.802

4.  Old gene, new phenotype: splice-altering variants in CEACAM16 cause recessive non-syndromic hearing impairment.

Authors:  Kevin T Booth; Kimia Kahrizi; Hela Azaiez; Richard Jh Smith; Hossein Najmabadi
Journal:  J Med Genet       Date:  2018-04-27       Impact factor: 6.318

5.  Exonic mutations and exon skipping: Lessons learned from DFNA5.

Authors:  Kevin T Booth; Hela Azaiez; Kimia Kahrizi; Donghong Wang; Yuzhou Zhang; Kathy Frees; Carla Nishimura; Hossein Najmabadi; Richard J Smith
Journal:  Hum Mutat       Date:  2018-01-11       Impact factor: 4.878

6.  The phenotypic landscape of a Tbc1d24 mutant mouse includes convulsive seizures resembling human early infantile epileptic encephalopathy.

Authors:  Risa Tona; Wenqian Chen; Yoko Nakano; Laura D Reyes; Ronald S Petralia; Ya-Xian Wang; Matthew F Starost; Talah T Wafa; Robert J Morell; Kevin D Cravedi; Johann du Hoffmann; Takushi Miyoshi; Jeeva P Munasinghe; Tracy S Fitzgerald; Yogita Chudasama; Koichi Omori; Carlo Pierpaoli; Botond Banfi; Lijin Dong; Inna A Belyantseva; Thomas B Friedman
Journal:  Hum Mol Genet       Date:  2019-05-01       Impact factor: 6.150

7.  Skywalker-TBC1D24 has a lipid-binding pocket mutated in epilepsy and required for synaptic function.

Authors:  Baptiste Fischer; Kevin Lüthy; Jone Paesmans; Charlotte De Koninck; Ine Maes; Jef Swerts; Sabine Kuenen; Valerie Uytterhoeven; Patrik Verstreken; Wim Versées
Journal:  Nat Struct Mol Biol       Date:  2016-09-26       Impact factor: 15.369

8.  Variants in CIB2 cause DFNB48 and not USH1J.

Authors:  K T Booth; K Kahrizi; M Babanejad; H Daghagh; G Bademci; S Arzhangi; D Zareabdollahi; D Duman; A El-Amraoui; M Tekin; H Najmabadi; H Azaiez; R J Smith
Journal:  Clin Genet       Date:  2018-02-12       Impact factor: 4.438

Review 9.  Invited review: Small GTPases and their GAPs.

Authors:  Ashwini K Mishra; David G Lambright
Journal:  Biopolymers       Date:  2016-08       Impact factor: 2.505

10.  PDZD7 and hearing loss: More than just a modifier.

Authors:  Kevin T Booth; Hela Azaiez; Kimia Kahrizi; Allen C Simpson; William T A Tollefson; Christina M Sloan; Nicole C Meyer; Mojgan Babanejad; Fariba Ardalani; Sanaz Arzhangi; Michael J Schnieders; Hossein Najmabadi; Richard J H Smith
Journal:  Am J Med Genet A       Date:  2015-09-29       Impact factor: 2.802

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