| Literature DB >> 24715766 |
Rimantas Rakauskas1, Jekaterina Havelka1, Audrius Zaremba1, Rasa Bernotienė1.
Abstract
Partial sequences of the mitochondrial COI gene of forty eight European and two Turkish population samples of Myzus cerasi from different winter hosts (Prunus spp.) were subjected to phylogenetic analyses. The analysed M. cerasi samples emerged as paraphyletic relative to a Myzus borealis sample used as an out-group, and formed two major clades in neighbor joining, maximum parsimony, maximum likelihood and Bayesian inference trees, corresponding to subspecies living specifically on Prunus avium and P. cerasus. Multivariate discriminant analysis (method of canonical variates) was applied to find out if morphological variation of samples correlated with mitochondrial COI and host plant information. Mean scores on the first two canonical variables clustered samples fully in accordance with their COI haplotypes and host plants confirming the existence of two morphologically similar winter host - specific subspecies of M. cerasi in Europe. No single morphological character enabled satisfactory discrimination between apterous viviparous females of the two subspecies. A three-character linear discriminant function enabled 92.37% correct identification of apterous viviparous females of M. cerasi cerasi (n = 118) and 93.64% of M. cerasi pruniavium (n = 110). A key for the morphological identification of the two subspecies is presented and their taxonomic status is discussed.Entities:
Keywords: Molecular systematics; cherry aphids; morphological key to subspecies
Year: 2014 PMID: 24715766 PMCID: PMC3978913 DOI: 10.3897/zookeys.388.7034
Source DB: PubMed Journal: Zookeys ISSN: 1313-2970 Impact factor: 1.546
Aphid material used in the present study. Samples used for morphology-based discriminant analysis are given in bold.
| Place, date, collection number; (number of individual apterae per sample) | GenBank Accession No |
|---|---|
| Alytus, Lithuania, 2012.05.30, 12-30; (8) | |
| Molėtai, Lithuania, 2012.06.19, 12-72; (8) | |
| Kraujaliai, Molėtai distr., Lithuania, 2012.07.10, 12-120; (8) | |
| Žičkai, Molėtai distr., Lithuania, 2012.07.13, 12-132; (8) | |
| Bagnolo Mella, Brescia prov., Italy, 2013.05.01, 13-27; (8) | |
| Poncarale, Brescia prov., Italy, 2013.05.02, 13-33; (8) | |
| Suginčiai, Molėtai distr., Lithuania, 2013.06.15, 13-83; (8) | |
| Akmeniai, Lazdijai distr., Lithuania, 2013.05.30, 13-57; (8) | |
| Karsava, Ludza distr., Latvia, 2013.07.17, 13-133; (8) | |
| Gorodok, Vitebsk distr., Belarus, 2008.06.17, 08-6; (6) | |
| Zadrachje, Vitebsk distr., Belarus, 2008.06.18, 08-18; (8) | |
| Riga, Latvia, 2008.07.03, 08-73; (8) | |
| Cluj Gilau, Romania, 2012.06.19, Z12-116; (8) | |
| Poncarale, Brescia prov., Italy, 2013.05.02, 13-30; (8) | |
| Mezöpeterd, Hajdu-Bihar distr., Hungary, 2012.06.20, Z12-122; (8) | |
| Skirgiškės, Vilnius distr., Lithuania, 2012.06.05, 12-39; (7) | |
| Frankfurt/Main, Germany, 2012.06.30, 12-104; (8) | |
| Preila, Neringa, Lithuania, 2012.08.13, 12-199; (7) | |
| Rondo, Katowice, Poland, 2011.05.13, 11-10; (8) | |
| Tekir, Karamanmarash distr., Turkey, 2011.05.21, 11-25; (5) | |
| Göksun, Karamanmarash distr., Turkey, 2011.05.21, 11-27; (8) | |
| Zafferana, Catania, Italy, 2004.06.28, 04-49; (5) | |
| Costinesti, Romania, 2012.06.15, Z12-90; (8) | |
| Cluj Gilau, Romania, 2012.06.19, Z12-117; (7) | |
| Carpendolo, Brescia prov., Italy, 2013.04.27, 13-12; (7) | |
| Akmeniai, Lazdijai distr., Lithuania, 2013.05.30, 13-60; (8) | |
| Wojslawice, Lower Silesia, Poland, 2013.06.20, 13-98; (8) | |
| Wojslawice, Lower Silesia, Poland, 2013.06.20, 13-97; (8) | |
| Dobele, Latvia, 2013.07.03, 13-119; (8) | |
| Medias, Sibiu distr., Romania, 2012.06.19, Z12-113; (8) | |
| Zmejinyje ostrova, Kanev distr., Cherkasy reg., Ukraine, 2006.06.16, 06-74 | |
Figure 1.Haplotype network (TCS 1.21 software: Clement et al. 2000) for COI fragment (616 positions in final set) haplotypes of and . The haplotype with the highest outgroup probability is displayed as a square, while others are displayed as ovals. For sample information, see Table 2.
COI haplotypes of three taxa revealed by construction of haplotype network. Sample numbers are the same as given in Table 1.
| Haplotype number | Number of sequences | Sequence length (bp) | Sample numbers |
|---|---|---|---|
| 1 | 2 | 616 | 13-33; 13-27. |
| 2 | 23 | 616 | 08-6;12-32; 12-176; 12-30; 08-18; z12-122; 12-120; z12-112; 12-132; 12-25; 12-43; 12-191; 12-203; 12-70; 12-72; 08-73; 13-83; 13-133; 11-46; z12-116; 12-37; 13-30; 13-57 |
| 3 | 23 | 616 | 11-10; 12-39; z12-110; 12-182; 12-104; 12-56; 12-83; 12-111; 12-199; z12-90; z12-102; 12-48; 12-188; z12-113 ( |
| 4 | 2 | 616 | 11-27; 11-25 |
| 5 | 1 | 616 | 06-74 |
Range of pairwise interspecific sample divergences of mitochondrial COI gene fragment (K2P model) for three species of (number of samples used is in parentheses).
| Species 1 | Species 2 | Range of divergence, % |
|---|---|---|
| 0.2 – 0.5 | ||
| 6.6 – 6.8 | ||
| 6.8 |
Figure 2.Maximum likelihood (ML) tree showing phylogenetic relationships among based on partial sequences of mitochondrial COI (616 positions in final set). Numbers above branches indicate support of NJ (left, > 50%) and MP (right, > 50%) bootstrap test with 1000 replicates, and numbers below branches indicate support of ML (left, > 50%) bootstrap test with 1000 replicates and posterior probabilities of BI analysis (right, > 0.50). Samples used for the discriminant analysis with a priori specified group membership followed by the construction of identification key are asterisked (*). The remaining samples were used for the post hoc classification. Sample numbers are the same as given in Table 1, together with the abbreviated symbol of respective country BG – Bulgaria, BY – Belarus, D – Germany, HU – Hungary, IT – Italy, LV – Latvia, LT – Lithuania, PL – Poland, RO – Romania, TR – Turkey, UA – Ukraine.
Figure 3.Plot of the mean scores of the first two canonical variates for 20 samples of (for specimen numbers per sample see Table 1). Samples cluster in accordance with winter host plant and COI haplotype (haplotype number is given in parentheses, see Table 2 for other haplotypes).
Contributions of 11 morphological characters to the canonical function discriminating 20 samples of . Character abbreviations are the same as in the text (Material and methods).
| Wilks’ Lambda | Partial Wilks’ Lambda | F-remove | p-level | Toler. | 1-Toler. (R-Sqr.) | |
|---|---|---|---|---|---|---|
| 0.34 | 0.65 | 72.00 | 0.00 | 0.46 | 0.54 | |
| 0.30 | 0.73 | 49.26 | 0.00 | 0.31 | 0.69 | |
| 0.27 | 0.83 | 28.31 | 0.00 | 0.79 | 0.21 | |
| 0.24 | 0.91 | 12.99 | 0.00 | 0.71 | 0.29 | |
| 0.23 | 0.93 | 9.51 | 0.00 | 0.65 | 0.35 | |
| 0.23 | 0.94 | 8.69 | 0.00 | 0.47 | 0.53 | |
| 0.23 | 0.97 | 4.62 | 0.01 | 0.49 | 0.51 | |
| 0.23 | 0.97 | 4.23 | 0.02 | 0.86 | 0.14 | |
| 0.23 | 0.97 | 3.70 | 0.03 | 0.85 | 0.15 | |
| 0.22 | 0.98 | 2.38 | 0.10 | 0.57 | 0.43 | |
| 0.22 | 0.99 | 1.75 | 0.18 | 0.56 | 0.44 |
Figure 4.Plot of the mean scores of the individual LDF values (number of specimens per sample is given in Table 1) plotted against the mean body length for 30 samples of (normal font in Table 1) used to evaluate effectiveness of the eventual identification key. The icons are color-coded to match the COI haplotypes. Samples cluster in accordance with winter host plant and COI haplotype (haplotype number is given in parentheses, see Table 2 for haplotype information).
Pairwise sample divergences of 1145 bp mitochondrial COI gene fragment (K2P model) between three subspecies of (number of sequences used is in parentheses).
| Subspecies 1 | Subspecies 2 | Mean and range of divergence, % |
|---|---|---|
| 1.2 (0.97–1.42) | ||
| 0.15 (0.00–0.26) | ||
| 1.05 (0.97–1.15) |
| 1 | Value of LDF [3.92× (length of siphunculus) - 5. 67×(length of terminal process of antennal segment 6) - 32.55×(maximal length of the ventral body hairs) + 1] greater than zero. On | |
| – | Value of LDF less than zero. On |