Literature DB >> 26692796

Congruence between cytochrome oxidase I (COI) and morphological data in Anuraphis spp. (Hemiptera, Aphididae) with a comparison between the utility of the 5' barcode and 3' COI regions.

Giuseppe E Massimino Cocuzza1, Silvia Di Silvestro2, Rosanna Giordano3, Carmelo Rapisarda1.   

Abstract

The discrimination of species in the genus Anuraphis is particularly difficult due to the overlap of morphological characters. In this study, we used the 5' (barcode) and 3' regions of cytochrome oxidase I (COI) to test their utility in the identification of species in this genus as well as closely related species. Both regions were useful to discriminate all the species tested. However the non-barcode 3' region resulted in higher resolution and support for species relationships when the data were analyzed using both Maximum Likelihood and MrBayes. We propose the development of an integrated database that encompasses morphological, molecular, life-cycle, host plant and bibliographic information to facilitate and increase the accuracy of aphid identification.

Entities:  

Keywords:  Insects; aphids; species identification; taxonomy

Year:  2015        PMID: 26692796      PMCID: PMC4668903          DOI: 10.3897/zookeys.529.6081

Source DB:  PubMed          Journal:  Zookeys        ISSN: 1313-2970            Impact factor:   1.546


Introduction

Aphids are sap-sucking insects. Currently there are 5012 valid species (Favret 2014) associated with plants belonging to various botanical groups. Many species have a heteroecious life cycle that includes alternating between a primary host plant (usually a tree) and a secondary host (usually an herbaceous species). The genus Del Guercio presently ascribed to the tribe includes a small number of taxonomically well-defined species, (Walker, 1852), (Koch, 1854), Hille Ris Lambers, 1935, Shaposhnikov, 1950, Barbagallo & Stroyan, 1982, Shaposhnikov, 1995 and Barbagallo & Cocuzza, 2003. In addition, Remaudière and Remaudière (1997) reported four other nominal species (i.e., Nevsky, 1929, Nevsky, 1929, Monzen, 1934 and Shinji, 1952). However, the generic placement of has been questioned by Blackman and Eastop (2006) who noted that, based on the original description, this is probably not an species but an immature sp. The recognized species are distributed in the Ponto-Mediterranean area of the western Palaearctic region. A common trait of almost all species is the use of as host plants, with the exception of that feeds on (, and ). Some populations of , , and have been shown to be heteroecious holocyclic with spp. () as primary host plants (Shaposhnikov 1951; Kolesova 1972; Lampel and Meyer 2007). However, some populations of (Shaposhnikov & Sharov, 1978), and probably other species, are solely anholocyclic on secondary host plants. For , and the primary host plants remain to be determined. (pear-colt’s foot aphid) and (pear-hogweed aphid) have been reported in the literature as pests of pear, where they cause direct damage to young foliage in spring (Kolesova 1972). However, damage due to their infestation has a negligible effect on production (Alford 2014). All species belonging to the genus are morphologically similar to each other but easily discriminated from other genera. The main morphological features of the genus are an almost flat frontal profile, as a result of the minimally developed antennal tubercles, and a short cauda. Moreover, shares with a few other genera of a typical spinulose ornamentation of siphunculi and a well-developed, often almost complete set of dorsal tubercles (both marginal and spinal). However, as already reported for other groups of aphids, the morphometric similarity among species leads to an overlap that renders their discrimination to species level difficult (Stroyan 1984; Heie 1986). Barbagallo and Cocuzza (2003) published a morphological key to discriminate viviparous morphs (for both apterae and alate) of species and a discriminant function to separate and . However, the discrimination of and using only morphological characters requires the skills of an experienced researcher, especially when specimens are collected on primary host plants or when the secondary host is unknown. In some genus (e.g. ), a recurrent and difficult problem in using only morphological characters to identify aphids is that for many species there are insufficient diagnostic characters, resulting in their identification being partially based on host plant association and life cycle characteristics (Stroyan 1984; Heie 1986). However, due to incomplete and/or missing knowledge of many aphid/plant associations, the use of this criterion to identify aphid species, could lead to misidentification (Stroyan 1984; Coeur d’acier et al. 2007). Many studies have used the 5’ region of the , more commonly referred to as the DNA barcode region, as a useful tool to discriminate various groups of insects (Hebert et al. 2003a, b, Deng et al. 2012; Derocles et al. 2012; Williams et al. 2012; Julsirikul et al. 2013), including aphid species (Coeur d’acier et al. 2008; Foottit et al. 2008, 2009a, b, c; Miller and Foottit 2009; Wang and Qiao 2009; Kim et al. 2010; Lee et al. 2011; Zhang et al. 2010, 2011; Wang et al. 2011; Chen et al. 2013; Massimino Cocuzza and Cavalieri 2014). However, especially in some insect groups such as , the DNA barcode region, due to low genetic diversity at this marker, was no more informative than morphological characters (Foottit et al. 2008; Lee et al. 2011). For instance, results obtained using the COI barcode region with adelgids were inadequate for the purpose of discriminating species that were morphologically indistinguishable or belonged to a species-complex (Žuroková 2010). Other studies have shown that the COI barcode region discriminated 96% of aphid taxa tested (Foottit et al. 2008). cytochrome oxidase I gene Ideally the description of a species should result from a synthesis of information that encompasses morphological, molecular, biological, biogeographical, physiological, ecological and bibliographical data (Dayrat 2005; De Salle 2006; Waugh 2007; Padial et al. 2010; Taylor and Harris 2012), however, this compendium of information is lacking for the great majority of species. This study was undertaken to improve the current taxonomic knowledge of the various taxa belonging to the genus by testing the utility of the COI gene, specifically comparing the widely used barcode 5’ region with the much less studied 3’ region, as a molecular tool for their identification. A further goal is to compare the results obtained with the COI gene to those previously published using only morphological characters (Barbagallo and Cocuzza 2003).

Materials and methods

This study was conducted with seven species (Table 1) belonging to the genus . Unfortunately, it was not possible to include , a species recorded only from Tajikistan on sp. When possible, species were collected in different geographic locations and on different host plants. Taxonomic nomenclature follows Remaudière and Remaudière (1997). Two samples of (Cowen, 1895) were included in the analysis. The genus is considered the vicariant (or sister) Nearctic relative of , from which it differs morphologically due to the lack of spinal tubercles, and biologically by the use of sp. as a primary host plant PageBreakPageBreakPageBreakPageBreakPageBreakand and as secondary hosts (Hille Ris Lambers 1970). In addition, samples of Hille Ris Lambers, Stroyan and Scopoli, were used as out-groups. Collections of aphid colonies were made on individual plants and at least two individuals were sequenced per collection. Details regarding the specimens used in this study (host plants, collection locality, sampling date and gene bank accession numbers) can be found in Table 1. For each sample, 5–6 apterae and alate individuals were slide-mounted for morphological identification. Specimens were morphologically identified by S. Barbagallo using characters in the keys provided by Heie (1992), Barbagallo and Cocuzza (2003) and Blackman (2010). Specimen slides are stored in the collection of S. Barbagallo (Department of Agriculture, Food and Environment, University of Catania).
Table 1.

Summary of information on samples used in the molecular analysis.

Voucher codeSpeciesHost plantLocationSampling dateGeneBank accession N°
S03189Anuraphis farfarae KochTussilago farfara40,0970N/15,8131E Lauria (Potenza, Basilicata)25 Jun. 03KT878791
S03190Anuraphis farfaraeTussilago farfara39,8762N/16,0050E Mormanno (Cosenza, Calabria)25 Jun. 03KT878792
S13572Anuraphis farfaraeTussilago farfara46,5606N/12,1285E Cortina d’Ampezzo (Bolzano, Trentino Alto Adige)18 Sep. 13KT878793
S03157Anuraphis pyrilaseri ShaposhnikovMagydaris pastinacea37,9795N/12,7637E Buseto Palizzolo (Trapani, Sicily)6 Jun. 03KT878794
S03171Anuraphis pyrilaseriThapsia garganica37,9258N/15,7602E Rognudi (Reggio Calabria, Calabria)9 Jun. 03KT878795
S03141Anuraphis pyrilaseriFerula communis37,6345N/15,0744E Trecastagni (Catania, Sicily)15 May 03KT878797
S03146Anuraphis pyrilaseriFerula communis38,0229N/15,3890E Fiumedinisi (Messina, Sicily)17 May 03KT878799
S03152Anuraphis pyrilaseriThapsia garganica37,8152N/15,1869E Piedimonte Etneo (Catania, Sicily)28 May 03KT878796
S03147 CBGP#ACOE2024 GBMIN37806 CBGP#ACOE2050 CBGP#ACOE1998Anuraphis pyrilaseri Anuraphis pyrilaseri Anuraphis pyrilaseri Anuraphis pyrilaseri Anuraphis pyrilaseriFerula communis Not reported Not reported Not reported Not reported38,0440N/15,4309E Itala (Messina, Sicily) 37,7863N/15,2337E Fiumefreddo (Catania, Sicily) Not reported 37,7826N/15,1325E Sant’Alfio (Catania, Sicily) 37,7827N/15,1418E Linguaglossa (Catania, Sicily)17 May 03 27 May 06 Not reported 30 May 06 23 May 06KP714117 ACEA860 GU568501 ACEA880 ACEA839
S03144Anurahis catonii HRLPimpinella major38,0505N/15,4343E Itala (Messina, Sicily)17 May 03KT878815
S03173Anurahis catoniiPimpinella peregrina37,9937N/15,9250E Bova (Reggio Calabria, Calabria)9 Jun. 03KT878816
S12477Anurahis catoniiPimpinella peregrina37,1334N/15,0165E Sortino (Siracusa, Sicily)25 May 12KT878817
S03179Anuraphis cachryos Barb. & Str.Cachrys sicula37,3619N/15,0219E Scordia (Catania, Sicily)15 Jun. 12KT878818
S03180Anuraphis cachryosCachrys sicula36,7765N/14,5989E Donnalucata (Ragusa, Sicily)15 Jun. 12KT878819
S12423Anuraphis cachryosCachrys sicula36,7766N/14,5990E Donnalucata (Ragusa, Sicily)2 May 12KT878820
S14599 CPGP#ACOE1057Anuraphis cachryos Anuraphis cachryosCachrys libanotis Not reported37,3080N/14,8587E Lentini (Siracusa, Sicily) 42,7869N/3,0361 Languedoc-Roussillon (France)13 Jun. 13 30 Oct. 00KT878821 ACEA353
S03181Anuraphis subterranea (Walker)Heracleum pyrenaicum37,9756N/14,9516E Floresta (Messina, Sicily)22 Jun. 03KT878800
S03182Anuraphis subterraneaHeracleum pyrenaicum37,9808N/15,1435E Novara di Sicilia (Messina, Sicily)22 Jun. 03KT878801
S12517Anuraphis subterraneaHeracleum sphondylium37,9020N/13,9999E Isnello (Palermo, Sicily)3 Jul. 12KT878804
S03191Anuraphis subterraneaPastinaca sativa39,8761N/16,0038E Mormanno (Cosenza, Sicily)25 Jun. 03KT878805
S03163Anuraphis subterraneaHeracleum pyrenaicum37,8801N/14,0283E Petralia Sottana (Palermo, Sicily)6 Jun. 03KT878802
S03184 CBGP#ACOE2053 CBGP#ACOE2060 CBGP#ACOE645 CBGP#ACOE1068Anuraphis subterranea Anuraphis subterranea Anuraphis subterranea Anuraphis subterranea Anuraphis subterraneaHeracleum pyrenaicum Not reported Not reported Not reported Not reported37,9756N/14,9516E Floresta (Messina, Sicily) 37,9216N/14,957E Randazzo (Catania, Sicily) 37,9921N/14,9306E Floresta (Messina, Sicily) 44,8893N/1,4062E Peryllac-et-Millac (France) 42,8742N/2,1829E Quillan (France)22 Jun. 03 30 May 06 30 May 06 2 Jun. 99 21 May 01KT878803 ACEA883 ACEA890 ACEA164 ACEA367
S03160Anuraphis shaposhnikovi Barb. & Coc.Magydaris pastinacea37,9795N/12,7637E Buseto Palizzolo (Trapani, Sicily)6 Jun. 03KT878808
S03143Anuraphis shaposhnikoviOpopanax chironium37,9075N/15,1211E Francavilla di Sicilia (Messina, Sicily)16 May 03KT878809
S03166Anuraphis shaposhnikoviOpopanax chironium37,9917N/15,9309E Bova Sup. (Reggio Cal., Calabria)9 Jun. 03KT878810
S14589 CBGP#ACOE438 CBGP#ACOE2052Anuraphis shaposhnikovi Anuraphis shaposhnikovi Anuraphis shaposhnikoviOpopanax chironium Not reported Not reported37,6324N/14,9859E Belpasso (Catania, Sicily) 44,1891N/6,7477E Entraunes (France) 37,9216N/14,957E Randazzo (Catania, Sicily)21 Apr. 14 24 Jul. 98 30 May 06KT878811 ACEA035 ACEA882
S12413Nearctaphis bakeri (Cowen)Trifolium pratense45,0877N/7,6387E Torino (Piemonte)16 Apr. 12KT878807
S13562 CBGP#ACOE824 CBGP#ACOE1020Nearctaphis bakeri Nearctaphis bakeri Nearctaphis bakeriTrifolium pratense Not reported Not reported41,2367N/13,9319E Sessa Aurunca (Caserta, Campania) 43,7337N/3,5500 Saint-Guillerme-le-Desert (France) 47,9862N/-4,4642E Plouhinec (France)12 Jun. 13 8 Apr. 00 30 Jul.00KT878806 ACEA242 ACEA331
S06340 CBGP#ACOE460Aphis fabae Scopoli Aphis fabaeVicia faba Not reported36,9251N/14,7423E Ragusa (Sicily) 44,0105N/3,6058E Levignan (France)20 Apr. 06 1 Jul. 98KT878822 ACEA050
S04230Roepkea marchali HRLPrunus mahaleb43,2235N/13,1518E S. Severino (Macerata, Marche)20 May 04KT878812
S14613Roepkea marchaliPrunus mahaleb50,0810N/14,4029E Prague (Czech Rep.)31 May 14KT878813
S14623 CBGP#ACOE1674Roepkea marchali Roepkea marchaliPrunus mahaleb Not reported50,0871N/14,4172E Prague (Czech Rep.) 43,6833N/3,9262E Teyran (France)1 Jun. 14 26 Jun. 0KT878814 ACEA723
S03145 GBMIN10086Brachycaudus jacobi Stroyan Brachycaudus jacobiMyosotis sylvatica Myosotis sylvatica38,0505N/15,4343E Itala (Messina, Sicily) 38,0505N/15,4343E Itala (Messina, Sicily)15 May 03 15 May 03EU189690 EU196598
Summary of information on samples used in the molecular analysis. Whole aphid specimens for DNA sequencing were stored in 95% ethanol at -20 °C, those used for morphological observations were stored in 70% ethanol and at room temperature. Total genomic DNA was extracted by macerating entire single individuals using the DNeasy Blood & Tissue kit (Qiagen®, Hilden, Germany) in 50 µl of extraction buffer and stored at -20 °C. To compare the utility of the 5’, barcode region, and the 3’ region of COI we amplified the following regions: for the 5’ end, a 600 bp region using primers LCO1490 and HCO2198 (Folmer et al. 1994), widely used on a variety of organisms as well as aphids (Hebert et al. 2003, Coeur D’acier et al. 2008; Kim et al. 2010; Lee et al. 2014), for the 3’ end, a 648 bp fragment using primers C1-J-2195 and TL2-N-3014 (Simon et al. 1994), found to be informative in several aphid studies (Coeur d’acier et al. 2008; Massimino Cocuzza and Cavalieri 2014). PCR reactions were performed using 8.5 µl of buffer premix 2x F (FailSafe tm PCR Premix Selection Kit –Epicentre Technologies) 1 µl of each primer (10 µM), 0.5 µl Taq polymerase (Life Technologies) and 2 µl DNA template (quantified in 6-18 ng/ µl) in a total volume of 21 µl. The cycle conditions for primer set LCO1490 and HCO2198 was 94 °C for 3 min (initial denaturation), followed by 35 cycles of 94 °C for 30 s (denaturation), 48 °C for 1 min (annealing) and 72 °C for 1 min (extension). Primer set C1-J-2195 and TL2-N-3014 conditions were 96 °C for 5 min (initial denaturation) and 35 cycles of 96 °C for 5 s (denaturation), 45 °C for 1 min (annealing), 72 °C for 1 min (extension). PCR products were run in 1.6% agarose gels stained with Syber Safe DNA gel stain (Life Technologies). PCR products were sequenced at BMR genomics (Padua, Italy) or at the W. M. Keck Center at the University of Illinois (Urbana-Champaign, IL) and run on an ABI PRISM 3730XL DNA analyzer (Life Technologies Corporation, Carlsbad, CA, USA). For each sample 2–8 individuals were sequenced, and one representative sequence for each sample was subsequently chosen. Sequences of available in Genbank and or BOLD databases were utilized in the analysis and are identified in Table 1 by their accession number. The COI sequences were edited manually using BioEdit (Hall 1999) or Sequencher v. 5.0 (GeneCodes Corporation, AnnArbor, MI, USA). Nucleotide sequences were translated using EPoS (Griebel et al. 2008) to check for stop codons (Zhang and Hewitt 1996). Sequence divergences were calculated using the p-distance model as suggested by PageBreakSrivathsan and Meier (2012), and a neighbour-joining (NJ) tree (Saitou and Nei 1987), as implemented in MEGA 6 (Tamura et al. 2011), was used to visualize the distance matrix among taxa and population samples. The Bayesian phylogenetic analysis was conducted using Mr.Bayes v 3.2.1 (Ronquist et al. 2012) implementing the GTR + I model of sequence evolution selected by JModel test 2.1.4 (Posada 2008) based on the . Beginning with random trees, four independent runs with four Markov chains were run for 25,000,000 generations. Bayesian trees were sampled every 1000th generations. All other parameters were set at default. Convergence was assessed using TRACER 1.6 (Rambaut et al. 2014) using a 25% burn in value. and the consensus trees were computed in MrBayes. The Bayesian analysis was run on the CIPRES Science Gateway (Miller et al. 2010). A maximum likelihood analysis was also performed using RAxML v. 8 (Stamatakis 2014) with the GTR +I model; clade support for the maximum likelihood tree was determined in RAxML by bootstrap, based on 1000 pseudoreplicates. Akaike information criterion Posterior probabilities

Results

COI was easily amplified for all specimens analysed using the primers indicated above. No frame shift or premature stop codons were detected. The five prime end (5’) constituted a 601 fragment. With total bp frequencies of 75.3% for A/T and 24.7% for G/C. These latter results concur with those found for other aphid species (Shufran et al. 2000; Wang et al. 2011). The 5’ end showed that there were 533 conserved and 125 variable nucleotides with 92 of the latter being parsimony informative. The overall average distance for the 5’ end of the COI gene was 5.8, ranging from 0 (samples within a species) to 11.7 across species. base pair The three prime end (3’) sequences analysed consisted of 648 bp with frequencies of 74.9% A/T and 25.1% G/C. The 3’ end showed that there were 521 constant and 127 variable sites of which 111 were parsimony informative. The percentage of variable sites was slightly higher for the 3’ (19.6%) than the 5’ end (18.99%). Considering the 5’ region, the mean genetic distance of species from , , and were 6.5%, 6.7%, 8.0% and 9.2%, respectively, whereas slightly higher distance values were observed for most comparisons of the 3’ region (7.5%, 7.9, 8.1 and 8.6%, respectively). The genetic differences recorded in the 5’ barcode region among species (Table 2) ranged from 0.2% (between and ) to 6.7% (between and ). When the 3’ region was used, the pairwise distance ranged from 0.8 ( vs ) to 7.4 ( vs ).
Table 2.

p-distance and nucleotide divergences (expressed as percentage) of spp. and species used as outgroup.

123456789
5’3’5’3’5’3’5’3’5’3’5’3’5’3’5’3’5’3’
1Anuraphis farfarae
2Anuraphis pyrilaseri1.73.2
3Anuraphis subterranea5.77.25.87.4
4Anuraphis shaposhnikovi5.36.95.06.63.74.7
5Anurahis catonii5.56.95.26.63.94.80.20.8
6Anuraphis cachryos6.67.06.76.64.35.95.63.35.63.8
7Nearctaphis bakeri6.88.36.97.95.67.66.66.96.67.06.77.1
8Roepkea marchali7.37.96.78.26.28.06.77.66.77.76.88.15.57.4
9Brachycaudus jacobi8.58.48.98.57.18.57.87.57.87.67.88.27.58.06.96.8
10Aphis fabae10.09.99.18.19.19.19.07.99.08.08.98.48.18.18.510.010.09.5
p-distance and nucleotide divergences (expressed as percentage) of spp. and species used as outgroup. Our results indicate that there is high genetic homogeneity within species, despite differences in geographic origin and host plant. is the only member of the genus that uses , nevertheless its position in is well supported (Fig. 2c and 2a). Adaptation to this host plant may be of recent origin and its ecological uniqueness is not reflected at the COI level.
Figure 2c.

MrBayes tree estimated using 648 bp at the 3’ end of COI for selected species.

Figure 2a.

Likelihood tree estimated using 648 bp at the 3’ end of COI for selected species.

Little to no intraspecific differences were found among the various geographic samples of each species (0.3% only for some populations of , and ). Phylogenetic analysis with , and Bayesian (MrBayes) using the 5’ and 3’ end of the COI gene showed two discreet clades: one comprising and ; the other including , , , and respectively (Figs 1, 2).
Figure 1a.

Neighbor-Joining tree showing relationships among selected species estimated using 648 bp at the 3’ end of the COI mitochondrial gene. Distance were estimated using the p-distance model of sequence evolution.

Neighbour Joining Maximum Likelyhood Neighbor-Joining tree showing relationships among selected species estimated using 648 bp at the 3’ end of the COI mitochondrial gene. Distance were estimated using the p-distance model of sequence evolution. Neighbor-Joining tree showing relationships among selected species estimated using 658 bp at the 5’ end of the COI mitochondrial gene. Distance were estimated using the p-distance model of sequence evolution. Likelihood tree estimated using 648 bp at the 3’ end of COI for selected species. Likelihood tree estimated using 658 bp at the 5’ end of COI for selected species. MrBayes tree estimated using 648 bp at the 3’ end of COI for selected species. MrBayes tree estimated using 658 bp at the 5’ end of COI for selected species. The clade including and shows a genetic distance between the two species of 3.2% when using the 3’end and 1.7% when using the 5’ end of COI. The various samples of were highly similar, regardless of host plant, locality and COI region examined. Similarly, the populations of showed low genetic variability (0.3%). Differences in body colour, possibly due to host plant effects, as well as differences in dorsal abdominal sclerotisation, do not correlate with the low genetic diversity observed with the COI gene. The various samples of showed no genetic differences, regardless of their geographic origin, host plant or COI region used for the analysis. Genetic difference (3.7% with 3’ and 4.7% with 5’ region) between and clearly distinguishes the two species, despite the small morphological differences observed (length of ultimate rostral PageBreaksegment and number and distribution of abdominal spinal tubercles). and showed the lowest genetic divergence (<1%) regardless of the COI region considered. However, while with 5’ COI barcode showed a pairwise distance of 0.2%, the 3’ region showed a difference of 0.8%. A result similar to the one based on COI was found using a multivariate discriminant analysis with 16 morphometric characters (Barbagallo and Cocuzza 2003) and graphically as Mahalanobis’ generalized distance (Fig. 3). The dendrogram indicates a distinction of and , and the similarity between the latter species and .
Figure 3.

Dendrogram of cluster-species results based on Mahalanobis’ generalized distances in apterae for spp. (20 individual for each species) based on 16 morphometric characters (from Barbagallo and Cocuzza 2003).

Dendrogram of cluster-species results based on Mahalanobis’ generalized distances in apterae for spp. (20 individual for each species) based on 16 morphometric characters (from Barbagallo and Cocuzza 2003).

Discussion

The molecular analysis based on the 3’ and 5’ COI gene regions indicates that the genus is a homogeneous taxonomic group. However, COI also provides PageBreakinformation to distinguish the taxa at the species level as evidenced by the level of support, 89% bootstrap or more, on the likelihood tree (Fig. 2a). Thus, the analysis using COI confirms the species delimitation concepts previously reported using a multivariate analysis of morphological features (Barbagallo and Cocuzza 2003). The division of species in two groups (one clade consisting of and , a second clade including , , and ) is easily observable by comparing the phylogenetic trees and Mahalanobis’ generalized distance. The COI-based molecular analysis permitted a better discrimination of and than the multivariate analysis based on morphometric features. It is useful that the COI gene can also differentiate and , because the taxonomic status of the latter species has been questioned. Hille Ris Lambers (1935), regarded as a subspecies of . The only morphological difference between and noted by Stroyan (1950) was in the number of secondary rhinaria on the antennae of alatae, more numerous in the former species. However, Blackman (2010) has reported other morphological differences between these two species, both in apterae and alatae. Biologically, it has been PageBreakshown that when transferred to , the nymphs of can reach adulthood (Stroyan 1959); conversely, Shaposhnikov (1951) observed that nymphs of transferred from pear survive on sp. but not on . A further intricacy was the recovery by Kolesova (1972) of a sample of on , although this could be a case of misidentification. Barbagallo and Cocuzza (2003) reported that , collected on has slight morphological differences from those developing on , (i.e., the length of the last rostral segment and the number of abdominal spinal tubercles). The putatively fixed nature of the morphological differences is confirmed by the COI analysis and can be the result of intraspecific variability and possibly geographic isolation, since occurs in very restricted areas of Sicily and Sardinia. Another interesting observation is the low genetic divergence observed between and , a similarity already evidenced in the morphological analysis (Barbagallo and Cocuzza 2003). These species may have diverged recently from a common ancestor as a result of differences in the habitats of their respective host plants. The genus is typical of herb-rich areas and PageBreakwooded pastures, whereas prefers uncultivated dry land with a Mediterranean climate (Pignatti 1982). The phenomenon of host-races as a first step leading to speciation has been repeatedly observed in phytophagous insects (Drès and Mallet 2001) and is common in aphids (Sunnucks et al. 1997; Margaritopoulos et al. 2007), especially in populations that have partially or totally lost the sexual generation in favour of continuous parthenogenetic reproduction. Host-plant use may represent a food resource niche that favours the speciation process of species in sympatry (Peccoud et al. 2010). Moreover, low genetic diversity at the COI level is typical of taxa with recent ecological divergence (Jimbo et al. 2011) and can explain the low genetic divergence (<1%) reported in some aphid groups (Foottit et al. 2008; Lee et al. 2011; Massimino Cocuzza and Cavalieri 2014). Lee et al. (2014) found that the COI barcode region was not helpful in the identification of 7% of the aphid species they examined. This lack of resolution could be resolved by the development of additional molecular markers with higher diversity, leading to greater accuracy in species identification (Lozier et al. 2009; Sano and Akimoto 2012; Chen et al. 2013; Lee et al. 2014). In the PageBreakcase of and the genetic difference, albeit low, was consistently observed in all samples analysed. We observed a difference in genetic distances when using the 5’ barcode or the 3’ regions of COI. Most “barcode” studies on aphids are carried out using the 5’ region of COI that has produced some ambiguous results (Foottit et al. 2008; Žuroková et al. 2010; Lee et al. 2011). This study demonstrates that in the 3’ COI region has a higher capacity of discrimination. In the case of and the difference recorded with the 3’ (0.8%) and 5’ regions (0.2%) is crucial, especially when considering that a distance of 0.5% in aphids is usually considered as the “borderline” between species (Massimino Cocuzza and Cavalieri 2014; Rakauskas et al. 2014). However, low genetic difference in species that are morphologically different is not an unknown phenomenon in aphids. For example, despite Kaltenbach, 1843 and Theobald, 1927 having well-defined morphological and biological differences, they have a low interspecific divergence (0.17%) in the 5’ COI region (Lee et al. 2014). The genetic results observed here in spp. closely mirror previous morphometric findings. The lack of appreciable differences in morphological characters is a phenomenon well known in various groups of aphids (Stroyan 1984; Foottit 1997; Wang et al. 2011) and this peculiarity can easily lead to the misidentification of species (Coeur d’acier et al. 2007). Because of this difficulty, there is a need for methods of investigation that can be used in conjunction with classic morphometric analysis. Confirming the finding of previous studies on aphids (Foottit et al. 2008; 2009c), the present study indicates that the COI gene may significantly aid in the correct identification of aphid species, especially in cases where morphological characters are insufficient to clarify taxonomic status. Morphometrics and the COI gene can be used in parallel to improve the discrimination of aphid species. However, an identification-integrated system that links molecular data, morphological features, life cycle, host plant, photos (in vivo and on slides) and a bibliography for each aphid species would further facilitate and improve the accuracy of aphid species determination.
  28 in total

1.  Biological identifications through DNA barcodes.

Authors:  Paul D N Hebert; Alina Cywinska; Shelley L Ball; Jeremy R deWaard
Journal:  Proc Biol Sci       Date:  2003-02-07       Impact factor: 5.349

2.  Phylogeny of the genus Aphis Linnaeus, 1758 (Homoptera: Aphididae) inferred from mitochondrial DNA sequences.

Authors:  A Coeur d'acier; E Jousselin; J-F Martin; J-Y Rasplus
Journal:  Mol Phylogenet Evol       Date:  2006-10-17       Impact factor: 4.286

Review 3.  DNA barcoding in animal species: progress, potential and pitfalls.

Authors:  John Waugh
Journal:  Bioessays       Date:  2007-02       Impact factor: 4.345

4.  EPoS: a modular software framework for phylogenetic analysis.

Authors:  Thasso Griebel; Malte Brinkmeyer; Sebastian Böcker
Journal:  Bioinformatics       Date:  2008-07-16       Impact factor: 6.937

5.  jModelTest: phylogenetic model averaging.

Authors:  David Posada
Journal:  Mol Biol Evol       Date:  2008-04-08       Impact factor: 16.240

6.  Nuclear integrations: challenges for mitochondrial DNA markers.

Authors:  D X Zhang; G M Hewitt
Journal:  Trends Ecol Evol       Date:  1996-06       Impact factor: 17.712

7.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

8.  DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates.

Authors:  O Folmer; M Black; W Hoeh; R Lutz; R Vrijenhoek
Journal:  Mol Mar Biol Biotechnol       Date:  1994-10

9.  MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space.

Authors:  Fredrik Ronquist; Maxim Teslenko; Paul van der Mark; Daniel L Ayres; Aaron Darling; Sebastian Höhna; Bret Larget; Liang Liu; Marc A Suchard; John P Huelsenbeck
Journal:  Syst Biol       Date:  2012-02-22       Impact factor: 15.683

10.  Mitochondrial COI and morphological evidence for host specificity of the black cherry aphids Myzus cerasi (Fabricius, 1775) collected from different cherry tree species in Europe (Hemiptera, Aphididae).

Authors:  Rimantas Rakauskas; Jekaterina Havelka; Audrius Zaremba; Rasa Bernotienė
Journal:  Zookeys       Date:  2014-03-12       Impact factor: 1.546

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1.  DNA Barcoding Subtropical Aphids and Implications for Population Differentiation.

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2.  A cryptic new species of Chlidonoptera Karsch, 1892 from the south west protected zone of the Central African Republic (Insecta, Mantodea, Hymenopodidae).

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