| Literature DB >> 24694571 |
Bin Wu1, Vanessa Oesker2, Jutta Wiese3, Susann Malien4, Rolf Schmaljohann5, Johannes F Imhoff6.
Abstract
A novel spirocyclic drimane coupled by two drimane fragmentEntities:
Mesh:
Substances:
Year: 2014 PMID: 24694571 PMCID: PMC4012445 DOI: 10.3390/md12041924
Source DB: PubMed Journal: Mar Drugs ISSN: 1660-3397 Impact factor: 5.118
Chart 1Structures of compounds 1–13.
Figure 1Colony of Stachybotrys sp. MF347, grown for 14 days at WSP30 agar.
Figure 2Stachybotrys sp. MF347, scanning electron micrograph showing conidiophore with phialides and conidia.
NMR data (500 MHz) for compound 1 in CD3OD.
| Position | 1 | |
|---|---|---|
| δC a,b, mult. | δH
c, mult. ( | |
| 1 | 174.0, C | - |
| 2 | 134.9, C | - |
| 3 | 102.3, CH | 6.74, s |
| 4 | 155.2, C | - |
| 5 | 118.6, C | - |
| 6 | 157.5, C | - |
| 7 | 116.8, C | - |
| 8 | 43.9, CH2 | 4.47, d (17.4), 4.31, d (17.4) |
| 9 | 33.1, CH2 | 3.25, d (17.0), 2.93, d (17.0) |
| 10 | 99.2, C | - |
| 11 | 38.0, CH | 1.91, m |
| 12 | 32.1, CH2 | 1.66, 1.56, 2 m |
| 13 | 21.7, CH2 | 1.54, 1.62, 2 m |
| 14 | 40.8, CH | 2.15, m |
| 15 | 44.8, C | - |
| 16 | 30.8, CH2 | 1.96, t (12.3), 1.36, dd (12.3, 4.4) |
| 17 | 72.0, CH | 5.21, ddd (12.3, 4.4, 2.1) |
| 18 | 77.0, CH | 3.48, d (2.1) |
| 19 | 39.9, C | - |
| 20 | 15.8, CH3 | 0.78, d (6.6) |
| 21 | 17.3, CH3 | 1.17, s |
| 22 | 29.1, CH3 | 0.99, s |
| 23 | 22.5, CH3 | 1.07, s |
| 24 | 172.6, C | - |
| 25 | 21.2, C | 1.99, s |
a Recorded at 125 MHz; b multiplicities inferred from DEPT and HMQC experiments; c recorded at 500 MHz.
Figure 3Key 1H 1H COSY and HMBC correlations of compounds 1 and 2.
Figure 4Key NOESY correlations of compound 1.
NMR data (500 MHz) for compound 2 in CD3OD.
| Position | Unit A | Position | Unit B | ||
|---|---|---|---|---|---|
| δC a,b, mult. | δH
c, mult. ( | δC a,b, mult. | δH
c, mult. ( | ||
| 1 | 171.1, C | - | 1′ | 74.0, CH2 | 5.21 dd (12.2, 2.1), 5.00, d (12.2) |
| 2 | 134.8, C | - | 2′ | 143.2, C | - |
| 3 | 102.4, CH | 6.77, s | 3′ | 100.2, CH | 6.29, s |
| 4 | 155.3, C | - | 4′ | 156.6, C | - |
| 5 | 119.3, C | - | 5′ | 113.8, C | - |
| 6 | 157.6 d, C | - | 6′ | 157.7 d, C | - |
| 7 | 114.4, C | - | 7′ | 109.1, C | - |
| 8 | 44.3, CH2 | 4.30, d (16.8), 3.86, d (16.8) | 8′ | 85.8, CH | 7.24, br d (2.1) |
| 9 | 33.0, CH2 | 3.23, d (17.0), 2.85, d (17.0) | 9′ | 32.4, CH2 | 3.15 d (16.2), 2.76 d (16.2) |
| 10 | 99.6, C | - | 10′ | 99.6, C | - |
| 11 | 38.5, CH | 1.84, m | 11′ | 38.0, CH | 1.72, m |
| 12 | 32.2, CH2 | 1.54, 1.44, overlap | 12′ | 32.0, CH2 | 1.23, 0.80, 2m |
| 13 | 22.0, CH2 | 1.54, 1.39, overlap | 13′ | 22.0, CH2 | 1.54, 1.39, overlap |
| 14 | 41.4, CH | 2.05, m | 14′ | 41.2, CH | 1.99, m |
| 15 | 43.4, C | - | 15′ | 43.5, C | - |
| 16 | 25.3, CH2 | 1.80, 1.15, overlap | 16′ | 25.3, CH2 | 1.80, 1.15, overlap |
| 17 | 26.1 e, CH2 | 1.96, 1.55, overlap | 17′ | 26.0 e, CH2 | 1.96, 1.55, overlap |
| 18 | 76.5, CH | 3.34, overlap | 18′ | 76.7, CH | 3.34, overlap |
| 19 | 38.0, C | - | 19′ | 38.0, C | - |
| 20 | 16.0, CH3 | 0.67, d (6.5) | 20′ | 16.1, CH3 | 0.49, d (6.5) |
| 21 | 16.5, CH3 | 1.10, s | 21′ | 16.5, CH3 | 1.02, s |
| 22 | 29.0 f, CH3 | 0.98, s | 22′ | 28.8 f, CH3 | 0.96, s |
| 23 | 23.1 g, CH3 | 0.89, s | 23′ | 23.0 g, CH3 | 0.87, s |
a Recorded at 125 MHz; b multiplicities inferred from DEPT and HMQC experiments; c recorded at 500 MHz; d,e,f,g interchangeable.
NMR data (500 MHz) for compound 3 and 4 in CD3OD.
| Position | 3 | 4 | ||
|---|---|---|---|---|
| δC a,b, mult. | δH
c, mult. ( | δC a,b, mult. | δH
c, mult. ( | |
| 1 | 171.8, C | - | 171.7, C | - |
| 2 | 134.4, C | - | 134.4, C | - |
| 3 | 102.2, CH | 6.72, s | 102.1, CH | 6.63, s |
| 4 | 155.2, C | - | 155.1, C | - |
| 5 | 119.2, C | - | 119.0, C | - |
| 6 | 157.6, C | - | 157.5, C | - |
| 7 | 114.6, C | - | 114.6, C | - |
| 8 | 45.7, CH2 | 4.64, d (16.8), 4.30, d (16.8) | 46.2, CH2 | 4.58, d (16.8), 4.29, d (16.8) |
| 9 | 32.2, CH2 | 3.27, d (16.9), 2.88, d (16.9) | 32.2, CH2 | 3.24, d (16.9), 2.83, d (16.9) |
| 10 | 99.8, C | - | 99.7, C | - |
| 11 | 38.5, CH | 1.88, m | 38.5, CH | 1.88, m |
| 12 | 33.0, CH2 | 1.62, 1.57, 2 m | 33.0, CH2 | 1.62, 1.55, 2 m |
| 13 | 22.1, CH2 | 1.51, 1.59, 2 m | 22.1, CH2 | 1.53, 1.59, overlap |
| 14 | 41.4, CH | 2.16, dd (11.7, 2.5) | 41.4, CH | 2.13, m |
| 15 | 43.5, C | - | 43.4, C | - |
| 16 | 25.4, CH2 | 1.86, 1.10, 2 m | 25.4, CH2 | 1.88, 1.12, 2 m |
| 17 | 26.0, CH2 | 2.00, 1.56, 2 m | 26.0, CH2 | 2.00, 1.55, 2 m |
| 18 | 76.5, CH | 3.37, t (2.5) | 76.5, CH | 3.36, t (2.5) |
| 19 | 38.6, C | - | 38.6, C | - |
| 20 | 16.0, CH3 | 0.76, d (6.6) | 15.9, CH3 | 0.70, d (6.6) |
| 21 | 16.6, CH3 | 1.08, s | 16.6, CH3 | 1.07, s |
| 22 | 29.0, CH3 | 1.01, overlap | 29.0, CH3 | 1.01, s |
| 23 | 23.0, CH3 | 0.91, s | 23.0, CH3 | 0.92, s |
| 1′ | 53.0, CH | 5.02, dd (11.4, 4.4) | 57.0, CH | 5.27, dd (11.1, 5.1) |
| 2′ | 39.4, CH2 | 1.98 overlap | 36.6, CH2 | 3.55, dd (14.8, 5.1), 3.26 (11.1, 5.0) |
| 3′ | 26.3, CH | 1.51 overlap | 138.7, C | - |
| 4′ | 21.4, CH3 | 1.01, d (6.9) | 129.6, CH | 7.28, dd (8.0, 2.1) |
| 5′ | 23.5, CH3 | 1.02, d (6.9) | 129.6, CH | 7.25, td (8.0, 2.1) |
| 6′ | 172.0 d, C | - | 127.7, CH | 7.17, tt (8.0, 2.1) |
| 7′ | - | - | 129.6, CH | 7.25, td (8.0, 2.1) |
| 8′ | - | - | 129.6, CH | 7.28, dd (8.0, 2.1) |
| 9′ | - | - | 174.0 d, C | - |
a Recorded at 125 MHz; b multiplicities inferred from DEPT and HMQC experiments; c recorded at 500 MHz. d inferred from HMBC.
Antibiotic and cytotoxic activities of the compounds 1–13. The IC50 values are given in µM. Compounds 1 and 3–10 exhibited IC50 values >50 µM in all assays.
| No. | Name | Antibiotic Activity | Cytotoxic Activity | |||
|---|---|---|---|---|---|---|
|
|
| NIH-3T3 | HepG2 | |||
| 2 | stachyin B | 1.42 (±0.07) | 1.02 (±0.09) | 1.75 (±0.09) | 13.01 (±0.46) | 14.27 (±1.54) |
| 11 | stachybocin B | 1.77 (±0.32) | 4.44 (±0.28) | 3.94 (±0.53) | >50 | >50 |
| 12 | stachybocin A | 2.03 (±0.23) | 2.84 (±0.35) | 3.71 (±0.22) | >50 | >50 |
| 13 | ilicicolin B | 1.06 (±0.11) | 3.18 µM (±0.33) | 0.74 (±0.12) | 30.00 (±1.20) | >50 |
Purification steps and yields of the compounds 1–13.
| Compound | Purification Step | Column | Gradient | Flow (mL/min) | UV Detection at (nm) | Yield (mg) | |
|---|---|---|---|---|---|---|---|
|
| - | NP | 0 min 20% C, 20 min 70% C | 5 | 224 | 8.8 | 7.6 |
|
| 1st | RP | 0 min 62% B, 20 min 63% B | 15 | 215 | 6.0 | 4.5 |
|
| 2nd | NP | 0 min 20% C, 20 min 30% C | 5 | - | - | - |
|
| 1st | RP | 0 min 50% B, 20 min 60% B | 15 | 219 | 9.5 | 14.6 |
|
| 1st | NP | 0 min 5% C, 20 min 15% C | 5 | 215 | 14.8 | 4.3 |
|
| 2nd | NP | 0 min 15% C, 20 min 35% C | 5→8 | - | - | - |
|
| - | NP | 0 min 20% C, 20 min 70% C | 5 (8 min) | 224 | 10.7 | 8.2 |
|
| - | - | - | 8 (12 min) | - | - | - |
|
| - | NP | 0 min 20% C, 20 min 70% C | 5 | 224 | 7.2 | 62.9 |
|
| - | NP | 0 min 30% C, 20 min 60% C | 5 | 218 | 6.4 | 19 |
|
| - | NP | 0 min 15% C, 20 min 20% C | 5 | 215 | 12 | 71.0 |
|
| - | NP | 0 min 20% C, 20 min 70% C | 5 | 215 | 13.6 | 10.5 |
|
| 1st | RP | isocratic: 40% B, 20 min | 15 | 215 | 10.5 | 6.7 |
|
| 2nd | NP | 0 min 10% C, 20 min 25% C | 5→6 | - | - | - |
|
| - | NP | 0 min 20% C, 20 min 70% C | 5→8 | 215 | 12.0 | 7.9 |
|
| 1st | RP | 0 min 62% B, 20 min 63% B | 15 | 215 | 8.0 | 14.6 |
|
| 2nd | RP | isocratic: 61% B, 20 min | 15 | - | - | - |
|
| 1st | NP | 0 min 0% C, 20 min 50% C | 5 | 215 | 9.4 | 4.9 |
B = acetonitrile supplemented with 0.1% formic acid; C = isopropanol supplemented with 0.1% formic acid; NP = Phenomenex Luna column (Silica (2), 5 µ, 100 A, 250 × 10 mm); RP = Phenomenex Gemini-NX column 1 (C18, 10 µ, 110 A, 100 × 50 mm).