Literature DB >> 24686226

A robust algorithm for thickness computation at low resolution and its application to in vivo trabecular bone CT imaging.

Yinxiao Liu, Dakai Jin, Cheng Li, Kathleen F Janz, Trudy L Burns, James C Torner, Steven M Levy, Punam K Saha.   

Abstract

Adult bone diseases, especially osteoporosis, lead to increased risk of fracture which in turn is associated with substantial morbidity, mortality, and financial costs. Clinically, osteoporosis is defined by low bone mineral density; however, increasing evidence suggests that the microarchitectural quality of trabecular bone (TB) is an important determinant of bone strength and fracture risk. Accurate measures of TB thickness and marrow spacing is of significant interest for early diagnosis of osteoporosis or treatment effects. Here, we present a new robust algorithm for computing TB thickness and marrow spacing at a low resolution achievable in vivo. The method uses a star-line tracing technique that effectively deals with partial voluming effects of in vivo imaging with voxel size comparable to TB thickness. Also, the method avoids the problem of digitization associated with conventional algorithms based on sampling distance transform along skeletons. Accuracy of the method was examined using computer-generated phantom images, while the robustness of the method was evaluated on human ankle specimens in terms of stability across a wide range of voxel sizes, repeat scan reproducibility under in vivo conditions, and correlation between thickness values computed at ex vivo and in vivo imaging resolutions. Also, the sensitivity of the method was examined by evaluating its ability to predict the bone strength of cadaveric specimens. Finally, the method was evaluated in a human study involving 40 healthy young-adult volunteers (age: 19-21 years; 20 males and 20 females) and ten athletes (age: 19-21 years; six males and four females). Across a wide range of voxel sizes, the new method is significantly more accurate and robust as compared to conventional methods. Both TB thickness and marrow spacing measures computed using the new method demonstrated strong associations (R2 ∈ [0.83, 0.87]) with bone strength. Also, the TB thickness and marrow spacing measures allowed discrimination between male and female volunteers (p ∈ [0.01, 0.04]) as well as between athletes and nonathletes (p ∈ [0.005, 0.03]).

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Year:  2014        PMID: 24686226      PMCID: PMC4517594          DOI: 10.1109/TBME.2014.2313564

Source DB:  PubMed          Journal:  IEEE Trans Biomed Eng        ISSN: 0018-9294            Impact factor:   4.538


  32 in total

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Authors:  C J Hernandez; G S Beaupré; T S Keller; D R Carter
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Review 2.  Bone microstructure in osteoporosis: transilial biopsy and histomorphometry.

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Review 3.  Magnetic resonance imaging of trabecular bone structure.

Authors:  Sharmila Majumdar
Journal:  Top Magn Reson Imaging       Date:  2002-10

4.  A method for the automatic characterization of bone architecture in 3D mice microtomographic images.

Authors:  E Martín-Badosa; A Elmoutaouakkil; S Nuzzo; D Amblard; L Vico; F Peyrin
Journal:  Comput Med Imaging Graph       Date:  2003 Nov-Dec       Impact factor: 4.790

5.  Improved reproducibility of high-resolution peripheral quantitative computed tomography for measurement of bone quality.

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Journal:  Med Eng Phys       Date:  2008-03-04       Impact factor: 2.242

6.  Age-related changes in vertebral trabecular bone architecture--assessed by a new method.

Authors:  L Mosekilde
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Journal:  J Clin Endocrinol Metab       Date:  2003-04       Impact factor: 5.958

8.  Relationships between surface, volume, and thickness of iliac trabecular bone in aging and in osteoporosis. Implications for the microanatomic and cellular mechanisms of bone loss.

Authors:  A M Parfitt; C H Mathews; A R Villanueva; M Kleerekoper; B Frame; D S Rao
Journal:  J Clin Invest       Date:  1983-10       Impact factor: 14.808

9.  Measurement of trabecular bone thickness in the limited resolution regime of in vivo MRI by fuzzy distance transform.

Authors:  Punam K Saha; Felix W Wehrli
Journal:  IEEE Trans Med Imaging       Date:  2004-01       Impact factor: 10.048

10.  The role of three-dimensional trabecular microstructure in the pathogenesis of vertebral compression fractures.

Authors:  M Kleerekoper; A R Villanueva; J Stanciu; D S Rao; A M Parfitt
Journal:  Calcif Tissue Int       Date:  1985-12       Impact factor: 4.333

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  14 in total

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Review 2.  A Review of Experimentally Informed Micromechanical Modeling of Nanoporous Metals: From Structural Descriptors to Predictive Structure-Property Relationships.

Authors:  Claudia Richert; Norbert Huber
Journal:  Materials (Basel)       Date:  2020-07-24       Impact factor: 3.623

3.  A Robust and Efficient Curve Skeletonization Algorithm for Tree-Like Objects Using Minimum Cost Paths.

Authors:  Dakai Jin; Krishna S Iyer; Cheng Chen; Eric A Hoffman; Punam K Saha
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4.  A semi-automatic framework of measuring pulmonary arterial metrics at anatomic airway locations using CT imaging.

Authors:  Dakai Jin; Junfeng Guo; Timothy M Dougherty; Krishna S Iyer; Eric A Hoffman; Punam K Saha
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5.  Characterization of trabecular bone plate-rod microarchitecture using multirow detector CT and the tensor scale: Algorithms, validation, and applications to pilot human studies.

Authors:  Punam K Saha; Yinxiao Liu; Cheng Chen; Dakai Jin; Elena M Letuchy; Ziyue Xu; Ryan E Amelon; Trudy L Burns; James C Torner; Steven M Levy; Chadi A Calarge
Journal:  Med Phys       Date:  2015-09       Impact factor: 4.071

6.  Trabecular bone characterization on the continuum of plates and rods using in vivo MR imaging and volumetric topological analysis.

Authors:  Cheng Chen; Dakai Jin; Yinxiao Liu; Felix W Wehrli; Gregory Chang; Peter J Snyder; Ravinder R Regatte; Punam K Saha
Journal:  Phys Med Biol       Date:  2016-08-19       Impact factor: 3.609

7.  Deep Learning Based High-Resolution Reconstruction of Trabecular Bone Microstructures from Low-Resolution CT Scans using GAN-CIRCLE.

Authors:  Indranil Guha; Syed Ahmed Nadeem; Chenyu You; Xiaoliu Zhang; Steven M Levy; Ge Wang; James C Torner; Punam K Saha
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2020-02-28

8.  Effects of fluoride intake on cortical and trabecular bone microstructure at early adulthood using multi-row detector computed tomography (MDCT).

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9.  Automated computer-assisted quantitative analysis of intact murine lungs at the alveolar scale.

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10.  Quantitative CT-Based Methods for Bone Microstructural Measures and Their Relationships With Vertebral Fractures in a Pilot Study on Smokers.

Authors:  Xiaoliu Zhang; Alejandro P Comellas; Elizabeth A Regan; Indranil Guha; Amal Shibli-Rahhal; Mishaela R Rubin; Paul A DiCamillo; Elena M Letuchy; R Graham Barr; Eric A Hoffman; Punam K Saha
Journal:  JBMR Plus       Date:  2021-03-19
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